RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 C6orf48Q9UBA6 75 aa13.16□□□□□ -0.3
PDGFA-204ENST00000405692 PCLOQ9Y6V0 5065 aa13.15□□□□□ -0.3
PDGFA-204ENST00000405692 CXCL5P42830 114 aa13.15□□□□□ -0.3
PDGFA-204ENST00000405692 ABCA13Q86UQ4 5058 aa13.15□□□□□ -0.3
PDGFA-204ENST00000405692 C2orf82Q6UX34 121 aa13.14□□□□□ -0.31
PDGFA-204ENST00000405692 IGLC3P0DOY3 106 aa13.13□□□□□ -0.31
PDGFA-204ENST00000405692 FAT1Q14517 4588 aa13.13□□□□□ -0.31
PDGFA-204ENST00000405692 VPS13BQ7Z7G8 4022 aa13.12□□□□□ -0.31
PDGFA-204ENST00000405692 SMIM1B2RUZ4 78 aa13.12□□□□□ -0.31
PDGFA-204ENST00000405692 F8VRH5 84 aa13.1□□□□□ -0.31
PDGFA-204ENST00000405692 KRTAP10-4P60372 401 aaPredicted RBP13.1□□□□□ -0.31
PDGFA-204ENST00000405692 COX7B2Q8TF08 81 aa13.1□□□□□ -0.31
PDGFA-204ENST00000405692 IFI27L1Q96BM0 104 aa13.1□□□□□ -0.31
PDGFA-204ENST00000405692 NDUFC2-KCTD14E9PQ53 114 aa13.09□□□□□ -0.31
PDGFA-204ENST00000405692 SPINK8P0C7L1 97 aa13.09□□□□□ -0.31
PDGFA-204ENST00000405692 Q6ZRP5 223 aa13.09□□□□□ -0.31
PDGFA-204ENST00000405692 SRRM2Q9UQ35 2752 aaKnown RBP13.08□□□□□ -0.32
PDGFA-204ENST00000405692 C9orf116Q5BN46 136 aaPredicted RBP13.08□□□□□ -0.32
PDGFA-204ENST00000405692 TRAV12-1A0A0B4J245 112 aa13.07□□□□□ -0.32
PDGFA-204ENST00000405692 GAGE2EQ4V326 116 aa13.07□□□□□ -0.32
PDGFA-204ENST00000405692 FAM19A2Q8N3H0 131 aa13.07□□□□□ -0.32
PDGFA-204ENST00000405692 GAGE2DQ9UEU5 116 aa13.07□□□□□ -0.32
PDGFA-204ENST00000405692 CHTOPQ9Y3Y2 248 aaKnown RBP13.07□□□□□ -0.32
PDGFA-204ENST00000405692 A0A1W2PNN7 141 aa13.06□□□□□ -0.32
PDGFA-204ENST00000405692 SCO1O75880 301 aa13.06□□□□□ -0.32
PDGFA-204ENST00000405692 SERF1AO75920 110 aa13.06□□□□□ -0.32
PDGFA-204ENST00000405692 ZNF22P17026 224 aaPredicted RBP13.06□□□□□ -0.32
PDGFA-204ENST00000405692 LEPROTL1O95214 131 aa13.04□□□□□ -0.32
PDGFA-204ENST00000405692 TMEM170BQ5T4T1 132 aa13.04□□□□□ -0.32
PDGFA-204ENST00000405692 C11orf86A6NJI1 115 aa13.03□□□□□ -0.32
PDGFA-204ENST00000405692 IGLV5-39A0A0G2JS06 123 aa13.02□□□□□ -0.33
PDGFA-204ENST00000405692 HSPB8Q9UJY1 196 aa13.02□□□□□ -0.33
PDGFA-204ENST00000405692 LINC00310P59036 64 aa13□□□□□ -0.33
PDGFA-204ENST00000405692 PRR3P79522 188 aaKnown RBP12.99□□□□□ -0.33
PDGFA-204ENST00000405692 SFTA2Q6UW10 78 aa12.99□□□□□ -0.33
PDGFA-204ENST00000405692 FAM19A5Q7Z5A7 132 aaPredicted RBP12.98□□□□□ -0.33
PDGFA-204ENST00000405692 FAM168BA1KXE4 195 aa12.96□□□□□ -0.33
PDGFA-204ENST00000405692 H0Y8G0 127 aa12.96□□□□□ -0.33
PDGFA-204ENST00000405692 NUPR1O60356 82 aa12.96□□□□□ -0.33
PDGFA-204ENST00000405692 HIST1H2BKO60814 126 aa12.96□□□□□ -0.33
PDGFA-204ENST00000405692 HIST1H2BJP06899 126 aa12.96□□□□□ -0.33
PDGFA-204ENST00000405692 HIST1H2BOP23527 126 aa12.96□□□□□ -0.33
PDGFA-204ENST00000405692 HIST1H2BBP33778 126 aa12.96□□□□□ -0.33
PDGFA-204ENST00000405692 HIST1H2BDP58876 126 aa12.96□□□□□ -0.33
PDGFA-204ENST00000405692 HIST1H2BCP62807 126 aa12.96□□□□□ -0.33
PDGFA-204ENST00000405692 HIST2H2BEQ16778 126 aa12.96□□□□□ -0.33
PDGFA-204ENST00000405692 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.96□□□□□ -0.33
PDGFA-204ENST00000405692 C9orf129Q5T035 196 aaKnown RBP12.96□□□□□ -0.33
PDGFA-204ENST00000405692 PHF5AQ7RTV0 110 aaKnown RBP12.96□□□□□ -0.33
PDGFA-204ENST00000405692 HIST1H2BHQ93079 126 aa12.96□□□□□ -0.33
PDGFA-204ENST00000405692 HIST1H2BNQ99877 126 aa12.96□□□□□ -0.33
PDGFA-204ENST00000405692 HIST1H2BMQ99879 126 aa12.96□□□□□ -0.33
PDGFA-204ENST00000405692 FABP4P15090 132 aa12.95□□□□□ -0.34
PDGFA-204ENST00000405692 S100A1P23297 94 aa12.95□□□□□ -0.34
PDGFA-204ENST00000405692 TMEM223A0PJW6 202 aa12.94□□□□□ -0.34
PDGFA-204ENST00000405692 KRTAP29-1A8MX34 341 aaPredicted RBP12.94□□□□□ -0.34
PDGFA-204ENST00000405692 J3QL48 77 aa12.94□□□□□ -0.34
PDGFA-204ENST00000405692 OXTP01178 125 aa12.94□□□□□ -0.34
PDGFA-204ENST00000405692 HNRNPA3P51991 378 aaKnown RBP12.94□□□□□ -0.34
PDGFA-204ENST00000405692 ODF1Q14990 250 aa12.94□□□□□ -0.34
PDGFA-204ENST00000405692 FLG2Q5D862 2391 aaPredicted RBP12.93□□□□□ -0.34
PDGFA-204ENST00000405692 M0QXV9 152 aa12.93□□□□□ -0.34
PDGFA-204ENST00000405692 XAGE1AQ9HD64 81 aa12.93□□□□□ -0.34
PDGFA-204ENST00000405692 PLNP26678 52 aa12.92□□□□□ -0.34
PDGFA-204ENST00000405692 MAP1LC3CQ9BXW4 147 aa12.92□□□□□ -0.34
PDGFA-204ENST00000405692 COX17Q14061 63 aa12.91□□□□□ -0.34
PDGFA-204ENST00000405692 UBE2BP63146 152 aa12.9□□□□□ -0.34
PDGFA-204ENST00000405692 PSORS1C2Q9UIG4 136 aa12.9□□□□□ -0.34
PDGFA-204ENST00000405692 LBHQ53QV2 105 aaPredicted RBP12.89□□□□□ -0.35
PDGFA-204ENST00000405692 ERG28Q9UKR5 140 aa12.89□□□□□ -0.35
PDGFA-204ENST00000405692 PFN2P35080 140 aa12.88□□□□□ -0.35
PDGFA-204ENST00000405692 SPINK6Q6UWN8 80 aa12.88□□□□□ -0.35
PDGFA-204ENST00000405692 KRTAP7-1Q8IUC3 87 aa12.88□□□□□ -0.35
PDGFA-204ENST00000405692 DPM2O94777 84 aa12.87□□□□□ -0.35
PDGFA-204ENST00000405692 C1orf137Q5JT78 98 aa12.87□□□□□ -0.35
PDGFA-204ENST00000405692 ZNF625Q96I27 306 aaPredicted RBP12.87□□□□□ -0.35
PDGFA-204ENST00000405692 C22orf24Q9Y442 160 aa12.87□□□□□ -0.35
PDGFA-204ENST00000405692 SERTAD4-AS1Q5TG53 156 aa12.86□□□□□ -0.35
PDGFA-204ENST00000405692 TP73-AS1Q9UF72 201 aa12.86□□□□□ -0.35
PDGFA-204ENST00000405692 PLA2G2DQ9UNK4 145 aa12.86□□□□□ -0.35
PDGFA-204ENST00000405692 IGKCP01834 107 aa12.85□□□□□ -0.35
PDGFA-204ENST00000405692 HERVK_113P61574 105 aa12.85□□□□□ -0.35
PDGFA-204ENST00000405692 LINC00587B1AMM8 73 aa12.83□□□□□ -0.36
PDGFA-204ENST00000405692 ATP6V1G1O75348 118 aa12.83□□□□□ -0.36
PDGFA-204ENST00000405692 HERV-K104P63124 156 aa12.83□□□□□ -0.36
PDGFA-204ENST00000405692 COA6Q5JTJ3 125 aaKnown RBP12.83□□□□□ -0.36
PDGFA-204ENST00000405692 MRPL55Q7Z7F7 128 aaKnown RBP12.83□□□□□ -0.36
PDGFA-204ENST00000405692 MYCBP2O75592 4640 aa12.82□□□□□ -0.36
PDGFA-204ENST00000405692 SRSF9Q13242 221 aaKnown RBP eCLIP12.82□□□□□ -0.36
PDGFA-204ENST00000405692 PLEKHB2Q96CS7 222 aa12.82□□□□□ -0.36
PDGFA-204ENST00000405692 MYMXA0A1B0GTQ4 84 aa12.81□□□□□ -0.36
PDGFA-204ENST00000405692 SYS1-DBNDD2H3BUS1 97 aa12.81□□□□□ -0.36
PDGFA-204ENST00000405692 LINC00158P58513 81 aa12.81□□□□□ -0.36
PDGFA-204ENST00000405692 REG3GQ6UW15 175 aa12.81□□□□□ -0.36
PDGFA-204ENST00000405692 NKAPP1Q8N9T2 125 aa12.81□□□□□ -0.36
PDGFA-204ENST00000405692 PMCHL2Q9BQD1 86 aa12.81□□□□□ -0.36
PDGFA-204ENST00000405692 LEPROTO15243 131 aa12.8□□□□□ -0.36
PDGFA-204ENST00000405692 SND1-IT1Q9HBX3 110 aa12.8□□□□□ -0.36
PDGFA-204ENST00000405692 NDUFA12Q9UI09 145 aa12.8□□□□□ -0.36
PDGFA-204ENST00000405692 DMBT1Q9UGM3 2413 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms