RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 WFDC10AQ9H1F0 79 aa4.33□□□□□ -1.72
TRAPPC13-202ENST00000399438 NOTCH1P46531 2555 aa4.33□□□□□ -1.72
TRAPPC13-202ENST00000399438 NPC2P61916 151 aa4.33□□□□□ -1.72
TRAPPC13-202ENST00000399438 DIRC1Q969H9 104 aa4.33□□□□□ -1.72
TRAPPC13-202ENST00000399438 ZNF876PQ49A33 203 aa4.32□□□□□ -1.72
TRAPPC13-202ENST00000399438 TMEM170BQ5T4T1 132 aa4.32□□□□□ -1.72
TRAPPC13-202ENST00000399438 C7orf65Q6ZTY9 151 aa4.32□□□□□ -1.72
TRAPPC13-202ENST00000399438 DAND5Q8N907 189 aa4.32□□□□□ -1.72
TRAPPC13-202ENST00000399438 C20orf78Q9BR46 151 aa4.32□□□□□ -1.72
TRAPPC13-202ENST00000399438 CNFNQ9BYD5 112 aa4.32□□□□□ -1.72
TRAPPC13-202ENST00000399438 DPH3P1Q9H4G8 78 aa4.32□□□□□ -1.72
TRAPPC13-202ENST00000399438 CELA1Q9UNI1 258 aa4.32□□□□□ -1.72
TRAPPC13-202ENST00000399438 SDHAF1A6NFY7 115 aa4.32□□□□□ -1.72
TRAPPC13-202ENST00000399438 SS18Q15532 418 aa4.32□□□□□ -1.72
TRAPPC13-202ENST00000399438 USMG5Q96IX5 58 aa4.32□□□□□ -1.72
TRAPPC13-202ENST00000399438 SMR3AQ99954 134 aa4.32□□□□□ -1.72
TRAPPC13-202ENST00000399438 B9D2Q9BPU9 175 aa4.32□□□□□ -1.72
TRAPPC13-202ENST00000399438 SPCS1Q9Y6A9 102 aa4.32□□□□□ -1.72
TRAPPC13-202ENST00000399438 NBEAL1Q6ZS30 2694 aa4.32□□□□□ -1.72
TRAPPC13-202ENST00000399438 LCE2BO14633 110 aa4.31□□□□□ -1.72
TRAPPC13-202ENST00000399438 C11orf86A6NJI1 115 aa4.31□□□□□ -1.72
TRAPPC13-202ENST00000399438 CR1P17927 2039 aa4.31□□□□□ -1.72
TRAPPC13-202ENST00000399438 MAST4O15021 2626 aa4.31□□□□□ -1.72
TRAPPC13-202ENST00000399438 STAB1Q9NY15 2570 aa4.3□□□□□ -1.72
TRAPPC13-202ENST00000399438 ZNF815PA8K554 130 aa4.3□□□□□ -1.72
TRAPPC13-202ENST00000399438 COX7CP15954 63 aa4.3□□□□□ -1.72
TRAPPC13-202ENST00000399438 TSPEAR-AS2P59090 65 aa4.3□□□□□ -1.72
TRAPPC13-202ENST00000399438 LINC00315P59091 139 aa4.3□□□□□ -1.72
TRAPPC13-202ENST00000399438 CXCL6P80162 114 aa4.3□□□□□ -1.72
TRAPPC13-202ENST00000399438 FBN1P35555 2871 aaKnown RBP4.3□□□□□ -1.72
TRAPPC13-202ENST00000399438 A0A0J9YX75 114 aa4.3□□□□□ -1.72
TRAPPC13-202ENST00000399438 TCL1BO95988 128 aa4.3□□□□□ -1.72
TRAPPC13-202ENST00000399438 SH2D6Q7Z4S9 175 aa4.3□□□□□ -1.72
TRAPPC13-202ENST00000399438 C7orf33Q8WU49 177 aa4.3□□□□□ -1.72
TRAPPC13-202ENST00000399438 COPS9Q8WXC6 57 aa4.29□□□□□ -1.72
TRAPPC13-202ENST00000399438 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC13-202ENST00000399438 IGKV2-29A2NJV5 120 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC13-202ENST00000399438 SMIM1B2RUZ4 78 aa4.29□□□□□ -1.72
TRAPPC13-202ENST00000399438 ZFP2Q6ZN57 461 aa4.29□□□□□ -1.72
TRAPPC13-202ENST00000399438 ANK3Q12955 4377 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-202ENST00000399438 IGKV3OR2-268A0A0C4DH90 116 aa4.29□□□□□ -1.72
TRAPPC13-202ENST00000399438 LOC107984156A0A0G2JMH3 177 aa4.29□□□□□ -1.72
TRAPPC13-202ENST00000399438 F8VRH5 84 aa4.29□□□□□ -1.72
TRAPPC13-202ENST00000399438 SNCGO76070 127 aa4.29□□□□□ -1.72
TRAPPC13-202ENST00000399438 CRIP2P52943 208 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC13-202ENST00000399438 KRTAP1-1Q07627 177 aa4.29□□□□□ -1.72
TRAPPC13-202ENST00000399438 ARL17AQ8IVW1 177 aa4.29□□□□□ -1.72
TRAPPC13-202ENST00000399438 DYNLRB2Q8TF09 96 aa4.29□□□□□ -1.72
TRAPPC13-202ENST00000399438 F8P00451 2351 aa4.29□□□□□ -1.72
TRAPPC13-202ENST00000399438 SMIM13P0DJ93 91 aa4.28□□□□□ -1.72
TRAPPC13-202ENST00000399438 WFDC2Q14508 124 aa4.28□□□□□ -1.72
TRAPPC13-202ENST00000399438 KIF25-AS1Q9Y6Z4 181 aa4.28□□□□□ -1.72
TRAPPC13-202ENST00000399438 A0A0J9YXY3 114 aa4.28□□□□□ -1.72
TRAPPC13-202ENST00000399438 A0A1W2PPM0 123 aa4.28□□□□□ -1.72
TRAPPC13-202ENST00000399438 CMC4P56277 68 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC13-202ENST00000399438 ZNF625Q96I27 306 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC13-202ENST00000399438 PKD1L1Q8TDX9 2849 aa4.28□□□□□ -1.73
TRAPPC13-202ENST00000399438 IGLV8-61A0A075B6I0 122 aa4.27□□□□□ -1.73
TRAPPC13-202ENST00000399438 CYSRT1A8MQ03 144 aa4.27□□□□□ -1.73
TRAPPC13-202ENST00000399438 LEPROTO15243 131 aa4.27□□□□□ -1.73
TRAPPC13-202ENST00000399438 SEC11AP67812 179 aa4.27□□□□□ -1.73
TRAPPC13-202ENST00000399438 CEND1Q8N111 149 aa4.27□□□□□ -1.73
TRAPPC13-202ENST00000399438 C8orf17Q9NRJ1 99 aa4.27□□□□□ -1.73
TRAPPC13-202ENST00000399438 NSD1Q96L73 2696 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC13-202ENST00000399438 FSHBP01225 129 aa4.27□□□□□ -1.73
TRAPPC13-202ENST00000399438 CD28P10747 220 aa4.27□□□□□ -1.73
TRAPPC13-202ENST00000399438 ETDBQ3ZM63 59 aa4.27□□□□□ -1.73
TRAPPC13-202ENST00000399438 ADM2Q7Z4H4 148 aa4.27□□□□□ -1.73
TRAPPC13-202ENST00000399438 IGLV4-69A0A075B6H9 119 aa4.27□□□□□ -1.73
TRAPPC13-202ENST00000399438 LINC01549A6NIU2 74 aa4.27□□□□□ -1.73
TRAPPC13-202ENST00000399438 H3BRM9 83 aa4.27□□□□□ -1.73
TRAPPC13-202ENST00000399438 SBSPONQ8IVN8 264 aa4.27□□□□□ -1.73
TRAPPC13-202ENST00000399438 TRAV2A0A0B4J234 112 aa4.26□□□□□ -1.73
TRAPPC13-202ENST00000399438 MYMXA0A1B0GTQ4 84 aa4.26□□□□□ -1.73
TRAPPC13-202ENST00000399438 M0QY20 66 aa4.26□□□□□ -1.73
TRAPPC13-202ENST00000399438 A0A1B0GW54 56 aa4.26□□□□□ -1.73
TRAPPC13-202ENST00000399438 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC13-202ENST00000399438 BAHCC1Q9P281 2608 aa4.26□□□□□ -1.73
TRAPPC13-202ENST00000399438 TRGV1A0A0A0MS02 117 aa4.25□□□□□ -1.73
TRAPPC13-202ENST00000399438 PLNP26678 52 aa4.25□□□□□ -1.73
TRAPPC13-202ENST00000399438 SOSTDC1Q6X4U4 206 aa4.25□□□□□ -1.73
TRAPPC13-202ENST00000399438 CHCHD5Q9BSY4 110 aa4.25□□□□□ -1.73
TRAPPC13-202ENST00000399438 POLR2KP53803 58 aaKnown RBP4.25□□□□□ -1.73
TRAPPC13-202ENST00000399438 IGIPA6NJ69 53 aa4.25□□□□□ -1.73
TRAPPC13-202ENST00000399438 H3BMM0 161 aa4.25□□□□□ -1.73
TRAPPC13-202ENST00000399438 H3BUA1 57 aa4.25□□□□□ -1.73
TRAPPC13-202ENST00000399438 FHL2Q14192 279 aa4.25□□□□□ -1.73
TRAPPC13-202ENST00000399438 KLK9Q2XQG4 91 aa4.25□□□□□ -1.73
TRAPPC13-202ENST00000399438 LENEPQ9Y5L5 61 aa4.25□□□□□ -1.73
TRAPPC13-202ENST00000399438 A6NN06 94 aa4.24□□□□□ -1.73
TRAPPC13-202ENST00000399438 RMI2Q96E14 147 aa4.24□□□□□ -1.73
TRAPPC13-202ENST00000399438 A0A096LPF7 62 aa4.24□□□□□ -1.73
TRAPPC13-202ENST00000399438 DEFB4AO15263 64 aa4.24□□□□□ -1.73
TRAPPC13-202ENST00000399438 MRPS36P82909 103 aaKnown RBP4.24□□□□□ -1.73
TRAPPC13-202ENST00000399438 Q6ZTI0 123 aa4.24□□□□□ -1.73
TRAPPC13-202ENST00000399438 TRBV7-3A0A075B6L6 115 aa4.23□□□□□ -1.73
TRAPPC13-202ENST00000399438 LINC00467Q9BRT7 94 aa4.23□□□□□ -1.73
TRAPPC13-202ENST00000399438 COL6A5A8TX70 2615 aa4.23□□□□□ -1.73
TRAPPC13-202ENST00000399438 TRBV7-7A0A0K0K1E9 115 aa4.23□□□□□ -1.73
TRAPPC13-202ENST00000399438 LINC01546A6NGU7 62 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms