RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 CKS1BP61024 79 aa8□□□□□ -1.13
VPREB3-202ENST00000398465 PRR3P79522 188 aaKnown RBP8□□□□□ -1.13
VPREB3-202ENST00000398465 PDZD11Q5EBL8 140 aa8□□□□□ -1.13
VPREB3-202ENST00000398465 FAT3Q8TDW7 4589 aa7.99□□□□□ -1.13
VPREB3-202ENST00000398465 NDUFC2-KCTD14E9PQ53 114 aa7.99□□□□□ -1.13
VPREB3-202ENST00000398465 ATP5LO75964 103 aa7.99□□□□□ -1.13
VPREB3-202ENST00000398465 HNRNPA3P51991 378 aaKnown RBP7.99□□□□□ -1.13
VPREB3-202ENST00000398465 C2orf82Q6UX34 121 aa7.99□□□□□ -1.13
VPREB3-202ENST00000398465 Q6ZRP5 223 aa7.99□□□□□ -1.13
VPREB3-202ENST00000398465 SLC7A5P1Q8MH63 180 aa7.99□□□□□ -1.13
VPREB3-202ENST00000398465 CHCHD1Q96BP2 118 aaKnown RBP7.99□□□□□ -1.13
VPREB3-202ENST00000398465 TOMM7Q9P0U1 55 aa7.99□□□□□ -1.13
VPREB3-202ENST00000398465 F8VRH5 84 aa7.98□□□□□ -1.13
VPREB3-202ENST00000398465 IGLC3P0DOY3 106 aa7.98□□□□□ -1.13
VPREB3-202ENST00000398465 C9orf116Q5BN46 136 aaPredicted RBP7.98□□□□□ -1.13
VPREB3-202ENST00000398465 C6orf226Q5I0X4 101 aa7.98□□□□□ -1.13
VPREB3-202ENST00000398465 LRP1Q07954 4544 aaKnown RBP7.98□□□□□ -1.13
VPREB3-202ENST00000398465 A0A1W2PNN7 141 aa7.97□□□□□ -1.13
VPREB3-202ENST00000398465 H3BRM9 83 aa7.97□□□□□ -1.13
VPREB3-202ENST00000398465 OXTP01178 125 aa7.97□□□□□ -1.13
VPREB3-202ENST00000398465 PMCHL1Q16048 86 aa7.97□□□□□ -1.13
VPREB3-202ENST00000398465 J3QL48 77 aa7.96□□□□□ -1.14
VPREB3-202ENST00000398465 COX7B2Q8TF08 81 aa7.95□□□□□ -1.14
VPREB3-202ENST00000398465 SPINK8P0C7L1 97 aa7.94□□□□□ -1.14
VPREB3-202ENST00000398465 NDUFA6P56556 154 aa7.94□□□□□ -1.14
VPREB3-202ENST00000398465 GAGE2EQ4V326 116 aa7.94□□□□□ -1.14
VPREB3-202ENST00000398465 GAGE2DQ9UEU5 116 aa7.94□□□□□ -1.14
VPREB3-202ENST00000398465 IGLV5-39A0A0G2JS06 123 aa7.93□□□□□ -1.14
VPREB3-202ENST00000398465 HSBP1O75506 76 aa7.93□□□□□ -1.14
VPREB3-202ENST00000398465 TRGC2P03986 189 aa7.93□□□□□ -1.14
VPREB3-202ENST00000398465 ZNF22P17026 224 aaPredicted RBP7.93□□□□□ -1.14
VPREB3-202ENST00000398465 TRAV12-1A0A0B4J245 112 aa7.92□□□□□ -1.14
VPREB3-202ENST00000398465 FAM168BA1KXE4 195 aa7.92□□□□□ -1.14
VPREB3-202ENST00000398465 ODF1Q14990 250 aa7.92□□□□□ -1.14
VPREB3-202ENST00000398465 C9orf129Q5T035 196 aaKnown RBP7.92□□□□□ -1.14
VPREB3-202ENST00000398465 FAM19A5Q7Z5A7 132 aaPredicted RBP7.92□□□□□ -1.14
VPREB3-202ENST00000398465 BAGE3Q86Y29 109 aa7.92□□□□□ -1.14
VPREB3-202ENST00000398465 M0QXV9 152 aa7.91□□□□□ -1.14
VPREB3-202ENST00000398465 SFTA2Q6UW10 78 aa7.91□□□□□ -1.14
VPREB3-202ENST00000398465 PHF5AQ7RTV0 110 aaKnown RBP7.91□□□□□ -1.14
VPREB3-202ENST00000398465 IFI27L1Q96BM0 104 aa7.91□□□□□ -1.14
VPREB3-202ENST00000398465 C11orf86A6NJI1 115 aa7.9□□□□□ -1.14
VPREB3-202ENST00000398465 COLCA2A8K830 154 aa7.9□□□□□ -1.14
VPREB3-202ENST00000398465 SPINK6Q6UWN8 80 aa7.9□□□□□ -1.14
VPREB3-202ENST00000398465 PSORS1C2Q9UIG4 136 aa7.9□□□□□ -1.14
VPREB3-202ENST00000398465 CHTOPQ9Y3Y2 248 aaKnown RBP7.9□□□□□ -1.14
VPREB3-202ENST00000398465 KRTAP7-1Q8IUC3 87 aa7.89□□□□□ -1.15
VPREB3-202ENST00000398465 SERF1AO75920 110 aa7.88□□□□□ -1.15
VPREB3-202ENST00000398465 LINC00310P59036 64 aa7.88□□□□□ -1.15
VPREB3-202ENST00000398465 TMEM170BQ5T4T1 132 aa7.88□□□□□ -1.15
VPREB3-202ENST00000398465 FAM19A2Q8N3H0 131 aa7.87□□□□□ -1.15
VPREB3-202ENST00000398465 XAGE1AQ9HD64 81 aa7.87□□□□□ -1.15
VPREB3-202ENST00000398465 LEPROTL1O95214 131 aa7.86□□□□□ -1.15
VPREB3-202ENST00000398465 UBE2BP63146 152 aa7.86□□□□□ -1.15
VPREB3-202ENST00000398465 SRSF9Q13242 221 aaKnown RBP eCLIP7.86□□□□□ -1.15
VPREB3-202ENST00000398465 C1orf137Q5JT78 98 aa7.86□□□□□ -1.15
VPREB3-202ENST00000398465 SERTAD4-AS1Q5TG53 156 aa7.86□□□□□ -1.15
VPREB3-202ENST00000398465 TP73-AS1Q9UF72 201 aa7.86□□□□□ -1.15
VPREB3-202ENST00000398465 COX17Q14061 63 aa7.85□□□□□ -1.15
VPREB3-202ENST00000398465 REG3GQ6UW15 175 aa7.85□□□□□ -1.15
VPREB3-202ENST00000398465 HSPB8Q9UJY1 196 aa7.85□□□□□ -1.15
VPREB3-202ENST00000398465 PLA2G2DQ9UNK4 145 aa7.85□□□□□ -1.15
VPREB3-202ENST00000398465 TMEM223A0PJW6 202 aa7.84□□□□□ -1.15
VPREB3-202ENST00000398465 MT1HL1P0DM35 61 aa7.84□□□□□ -1.15
VPREB3-202ENST00000398465 LBHQ53QV2 105 aaPredicted RBP7.84□□□□□ -1.15
VPREB3-202ENST00000398465 ERG28Q9UKR5 140 aa7.84□□□□□ -1.15
VPREB3-202ENST00000398465 IGLV7-43P04211 117 aa7.83□□□□□ -1.16
VPREB3-202ENST00000398465 KRTAP11-1Q8IUC1 163 aa7.83□□□□□ -1.16
VPREB3-202ENST00000398465 ZNF625Q96I27 306 aaPredicted RBP7.83□□□□□ -1.16
VPREB3-202ENST00000398465 LINC01600Q96MT4 127 aa7.83□□□□□ -1.16
VPREB3-202ENST00000398465 TNXBP22105 4242 aa7.83□□□□□ -1.16
VPREB3-202ENST00000398465 IGLV5-37A0A075B6J1 123 aa7.82□□□□□ -1.16
VPREB3-202ENST00000398465 SCO1O75880 301 aa7.82□□□□□ -1.16
VPREB3-202ENST00000398465 PLNP26678 52 aa7.82□□□□□ -1.16
VPREB3-202ENST00000398465 MRPL55Q7Z7F7 128 aaKnown RBP7.82□□□□□ -1.16
VPREB3-202ENST00000398465 C22orf24Q9Y442 160 aa7.82□□□□□ -1.16
VPREB3-202ENST00000398465 NUPR1O60356 82 aa7.81□□□□□ -1.16
VPREB3-202ENST00000398465 H0Y8G0 127 aa7.8□□□□□ -1.16
VPREB3-202ENST00000398465 HIST1H2BKO60814 126 aa7.8□□□□□ -1.16
VPREB3-202ENST00000398465 HIST1H2BJP06899 126 aa7.8□□□□□ -1.16
VPREB3-202ENST00000398465 HIST1H2BOP23527 126 aa7.8□□□□□ -1.16
VPREB3-202ENST00000398465 HIST1H2BBP33778 126 aa7.8□□□□□ -1.16
VPREB3-202ENST00000398465 PFN2P35080 140 aa7.8□□□□□ -1.16
VPREB3-202ENST00000398465 HIST1H2BDP58876 126 aa7.8□□□□□ -1.16
VPREB3-202ENST00000398465 HIST1H2BCP62807 126 aa7.8□□□□□ -1.16
VPREB3-202ENST00000398465 HIST2H2BEQ16778 126 aa7.8□□□□□ -1.16
VPREB3-202ENST00000398465 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.8□□□□□ -1.16
VPREB3-202ENST00000398465 HIST1H2BHQ93079 126 aa7.8□□□□□ -1.16
VPREB3-202ENST00000398465 DIRC1Q969H9 104 aa7.8□□□□□ -1.16
VPREB3-202ENST00000398465 HIST1H2BNQ99877 126 aa7.8□□□□□ -1.16
VPREB3-202ENST00000398465 HIST1H2BMQ99879 126 aa7.8□□□□□ -1.16
VPREB3-202ENST00000398465 HMCN2Q8NDA2 5059 aa7.8□□□□□ -1.16
VPREB3-202ENST00000398465 SND1-IT1Q9HBX3 110 aa7.79□□□□□ -1.16
VPREB3-202ENST00000398465 H0Y9J4 135 aa7.78□□□□□ -1.16
VPREB3-202ENST00000398465 HERV-K104P63124 156 aa7.78□□□□□ -1.16
VPREB3-202ENST00000398465 NKAPP1Q8N9T2 125 aa7.78□□□□□ -1.16
VPREB3-202ENST00000398465 DPM2O94777 84 aa7.77□□□□□ -1.17
VPREB3-202ENST00000398465 FABP4P15090 132 aa7.77□□□□□ -1.17
VPREB3-202ENST00000398465 MAP1LC3CQ9BXW4 147 aa7.77□□□□□ -1.17
VPREB3-202ENST00000398465 HERVK_113P61574 105 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms