RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 LINC01558Q9Y6Z2 57 aa8.95□□□□□ -0.98
CCBE1-201ENST00000398179 POLR2KP53803 58 aaKnown RBP8.95□□□□□ -0.98
CCBE1-201ENST00000398179 IGFL3Q6UXB1 125 aa8.95□□□□□ -0.98
CCBE1-201ENST00000398179 A8MWP4 228 aa8.94□□□□□ -0.98
CCBE1-201ENST00000398179 GAS8-AS1O95177 125 aa8.94□□□□□ -0.98
CCBE1-201ENST00000398179 SPTBN1Q01082 2364 aaKnown RBP8.94□□□□□ -0.98
CCBE1-201ENST00000398179 IGLV1-47P01700 117 aa8.94□□□□□ -0.98
CCBE1-201ENST00000398179 C8orf17Q9NRJ1 99 aa8.94□□□□□ -0.98
CCBE1-201ENST00000398179 PRO0255Q9UI72 69 aa8.94□□□□□ -0.98
CCBE1-201ENST00000398179 C1orf229Q6ZS94 237 aaPredicted RBP8.93□□□□□ -0.98
CCBE1-201ENST00000398179 EPM2AB3EWF7 344 aa8.93□□□□□ -0.98
CCBE1-201ENST00000398179 NUP210Q8TEM1 1887 aaPredicted RBP8.93□□□□□ -0.98
CCBE1-201ENST00000398179 DAZAP2Q15038 168 aaPredicted RBP8.92□□□□□ -0.98
CCBE1-201ENST00000398179 PRO3102Q9H379 93 aa8.92□□□□□ -0.98
CCBE1-201ENST00000398179 IGLV2-11P01706 119 aa8.92□□□□□ -0.98
CCBE1-201ENST00000398179 ZFP36P26651 326 aaKnown RBP8.92□□□□□ -0.98
CCBE1-201ENST00000398179 IGKV2-28A0A075B6P5 120 aa8.91□□□□□ -0.98
CCBE1-201ENST00000398179 IGKV2D-28P01615 120 aa8.91□□□□□ -0.98
CCBE1-201ENST00000398179 CDC42SE2Q9NRR3 84 aa8.91□□□□□ -0.98
CCBE1-201ENST00000398179 DOCK7Q96N67 2140 aa8.91□□□□□ -0.98
CCBE1-201ENST00000398179 TRBV7-4A0A0J9YYF1 115 aa8.9□□□□□ -0.98
CCBE1-201ENST00000398179 ARHGAP32A7KAX9 2087 aa8.9□□□□□ -0.98
CCBE1-201ENST00000398179 FAM229BQ4G0N7 80 aa8.9□□□□□ -0.98
CCBE1-201ENST00000398179 SPTBN2O15020 2390 aa8.9□□□□□ -0.99
CCBE1-201ENST00000398179 ZNF407Q9C0G0 2248 aa8.89□□□□□ -0.99
CCBE1-201ENST00000398179 OXTP01178 125 aa8.89□□□□□ -0.99
CCBE1-201ENST00000398179 LINC00337Q8N6G1 96 aa8.89□□□□□ -0.99
CCBE1-201ENST00000398179 Q8NBF4 154 aa8.88□□□□□ -0.99
CCBE1-201ENST00000398179 Q8N2B8 174 aa8.88□□□□□ -0.99
CCBE1-201ENST00000398179 A6NN06 94 aa8.87□□□□□ -0.99
CCBE1-201ENST00000398179 SPINK6Q6UWN8 80 aa8.87□□□□□ -0.99
CCBE1-201ENST00000398179 CACNA1EQ15878 2313 aa8.87□□□□□ -0.99
CCBE1-201ENST00000398179 CRIP3Q6Q6R5 217 aa8.87□□□□□ -0.99
CCBE1-201ENST00000398179 ZGRF1Q86YA3 2104 aa8.87□□□□□ -0.99
CCBE1-201ENST00000398179 IGLV2-18A0A075B6J9 118 aa8.86□□□□□ -0.99
CCBE1-201ENST00000398179 A0A087X002 238 aa8.86□□□□□ -0.99
CCBE1-201ENST00000398179 MSMPQ1L6U9 139 aa8.86□□□□□ -0.99
CCBE1-201ENST00000398179 Q8N9P0 234 aaPredicted RBP8.86□□□□□ -0.99
CCBE1-201ENST00000398179 FNDC1Q4ZHG4 1894 aaPredicted RBP8.85□□□□□ -0.99
CCBE1-201ENST00000398179 C7orf33Q8WU49 177 aa8.85□□□□□ -0.99
CCBE1-201ENST00000398179 PKDREJQ9NTG1 2253 aa8.85□□□□□ -0.99
CCBE1-201ENST00000398179 ZDBF2Q9HCK1 2354 aa8.85□□□□□ -0.99
CCBE1-201ENST00000398179 ROS1P08922 2347 aa8.85□□□□□ -0.99
CCBE1-201ENST00000398179 FAM218AQ96MZ4 157 aa8.84□□□□□ -0.99
CCBE1-201ENST00000398179 C11orf21Q9P2W6 132 aa8.84□□□□□ -0.99
CCBE1-201ENST00000398179 SHANK1Q9Y566 2161 aa8.84□□□□□ -0.99
CCBE1-201ENST00000398179 WNK2Q9Y3S1 2297 aa8.84□□□□□ -0.99
CCBE1-201ENST00000398179 KIAA1671Q9BY89 1806 aa8.84□□□□□ -0.99
CCBE1-201ENST00000398179 EP300Q09472 2414 aaPredicted RBP8.84□□□□□ -0.99
CCBE1-201ENST00000398179 LINC01006Q8NI28 216 aa8.84□□□□□ -0.99
CCBE1-201ENST00000398179 USF3Q68DE3 2245 aa8.84□□□□□ -0.99
CCBE1-201ENST00000398179 PRR9Q5T870 116 aa8.84□□□□□ -0.99
CCBE1-201ENST00000398179 Q8NA96 180 aa8.84□□□□□ -0.99
CCBE1-201ENST00000398179 A0A087WSZ3 146 aa8.81□□□□□ -1
CCBE1-201ENST00000398179 K7EQG2 157 aa8.81□□□□□ -1
CCBE1-201ENST00000398179 LINC00959A0A1B0GUT2 108 aa8.81□□□□□ -1
CCBE1-201ENST00000398179 COL4A3Q01955 1670 aa8.8□□□□□ -1
CCBE1-201ENST00000398179 C16orf95Q9H693 158 aa8.8□□□□□ -1
CCBE1-201ENST00000398179 LINC00167Q96N53 147 aa8.79□□□□□ -1
CCBE1-201ENST00000398179 MED13Q9UHV7 2174 aa8.79□□□□□ -1
CCBE1-201ENST00000398179 ODF3BA8MYP8 253 aa8.78□□□□□ -1
CCBE1-201ENST00000398179 PCNX2A6NKB5 2137 aa8.78□□□□□ -1
CCBE1-201ENST00000398179 LINC00242Q5T6M2 205 aa8.78□□□□□ -1
CCBE1-201ENST00000398179 MALRD1Q5VYJ5 2156 aa8.78□□□□□ -1
CCBE1-201ENST00000398179 CNOT1A5YKK6 2376 aaKnown RBP8.78□□□□□ -1
CCBE1-201ENST00000398179 C18orf65Q6ZTR6 163 aa8.77□□□□□ -1.01
CCBE1-201ENST00000398179 NOTCH3Q9UM47 2321 aa8.77□□□□□ -1.01
CCBE1-201ENST00000398179 FSTL3O95633 263 aa8.77□□□□□ -1.01
CCBE1-201ENST00000398179 LINC00574Q9H8X3 128 aa8.77□□□□□ -1.01
CCBE1-201ENST00000398179 DEFB131BA0A096LNP1 70 aa8.77□□□□□ -1.01
CCBE1-201ENST00000398179 C14orf177Q52M58 125 aa8.76□□□□□ -1.01
CCBE1-201ENST00000398179 ZNF580Q9UK33 172 aa8.76□□□□□ -1.01
CCBE1-201ENST00000398179 KIAA1549Q9HCM3 1950 aa8.75□□□□□ -1.01
CCBE1-201ENST00000398179 PLXNB3Q9ULL4 1909 aa8.75□□□□□ -1.01
CCBE1-201ENST00000398179 GTF3C1Q12789 2109 aa8.75□□□□□ -1.01
CCBE1-201ENST00000398179 COX6A2Q02221 97 aa8.75□□□□□ -1.01
CCBE1-201ENST00000398179 NOTCH2NLQ7Z3S9 236 aa8.74□□□□□ -1.01
CCBE1-201ENST00000398179 WISP2O76076 250 aa8.74□□□□□ -1.01
CCBE1-201ENST00000398179 DNAH10OSP0CZ25 163 aa8.73□□□□□ -1.01
CCBE1-201ENST00000398179 Q8NAQ8 132 aa8.73□□□□□ -1.01
CCBE1-201ENST00000398179 C9orf129Q5T035 196 aaKnown RBP8.72□□□□□ -1.01
CCBE1-201ENST00000398179 LMO4P61968 165 aa8.72□□□□□ -1.01
CCBE1-201ENST00000398179 PLA2G2CQ5R387 149 aa8.72□□□□□ -1.01
CCBE1-201ENST00000398179 APLNQ9ULZ1 77 aa8.72□□□□□ -1.01
CCBE1-201ENST00000398179 RIF1Q5UIP0 2472 aaKnown RBP8.71□□□□□ -1.01
CCBE1-201ENST00000398179 PCDH15Q96QU1 1955 aa8.71□□□□□ -1.01
CCBE1-201ENST00000398179 NDUFAF8A1L188 74 aa8.71□□□□□ -1.02
CCBE1-201ENST00000398179 FAM104AQ969W3 186 aa8.71□□□□□ -1.02
CCBE1-201ENST00000398179 LINC00483Q53H64 154 aa8.71□□□□□ -1.02
CCBE1-201ENST00000398179 C10orf99Q6UWK7 81 aa8.7□□□□□ -1.02
CCBE1-201ENST00000398179 LY6G6DO95868 133 aa8.7□□□□□ -1.02
CCBE1-201ENST00000398179 IGLV4-60A0A075B6I1 120 aa8.69□□□□□ -1.02
CCBE1-201ENST00000398179 MRGPRG-AS1Q2M3A8 158 aa8.69□□□□□ -1.02
CCBE1-201ENST00000398179 KLLNB2CW77 178 aa8.69□□□□□ -1.02
CCBE1-201ENST00000398179 PLCE1Q9P212 2302 aa8.69□□□□□ -1.02
CCBE1-201ENST00000398179 ANAPC1Q9H1A4 1944 aa8.68□□□□□ -1.02
CCBE1-201ENST00000398179 ABCA4P78363 2273 aa8.68□□□□□ -1.02
CCBE1-201ENST00000398179 IGLV5-52A0A0A0MRZ9 124 aa8.68□□□□□ -1.02
CCBE1-201ENST00000398179 CYSTM1Q9H1C7 97 aa8.68□□□□□ -1.02
CCBE1-201ENST00000398179 TANC2Q9HCD6 1990 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms