RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 TOMM7Q9P0U1 55 aa16.38■□□□□ 0.21
U2AF1-203ENST00000398137 SRRM2Q9UQ35 2752 aaKnown RBP16.37■□□□□ 0.21
U2AF1-203ENST00000398137 KIAA0087Q14695 138 aa16.37■□□□□ 0.21
U2AF1-203ENST00000398137 Q6ZRU5 148 aa16.36■□□□□ 0.21
U2AF1-203ENST00000398137 PRSS2P07478 247 aa16.35■□□□□ 0.21
U2AF1-203ENST00000398137 TMEM170BQ5T4T1 132 aa16.35■□□□□ 0.21
U2AF1-203ENST00000398137 S100A6P06703 90 aa16.34■□□□□ 0.21
U2AF1-203ENST00000398137 PMCHL2Q9BQD1 86 aa16.34■□□□□ 0.21
U2AF1-203ENST00000398137 FLG2Q5D862 2391 aaPredicted RBP16.33■□□□□ 0.2
U2AF1-203ENST00000398137 NDUFA1O15239 70 aa16.32■□□□□ 0.2
U2AF1-203ENST00000398137 C2orf82Q6UX34 121 aa16.32■□□□□ 0.2
U2AF1-203ENST00000398137 Q8IZM0 81 aa16.32■□□□□ 0.2
U2AF1-203ENST00000398137 FAM229AH3BQW9 127 aa16.31■□□□□ 0.2
U2AF1-203ENST00000398137 SYS1-DBNDD2H3BUS1 97 aa16.31■□□□□ 0.2
U2AF1-203ENST00000398137 C10orf25Q5T742 122 aa16.31■□□□□ 0.2
U2AF1-203ENST00000398137 HIST3H2BBQ8N257 126 aa16.31■□□□□ 0.2
U2AF1-203ENST00000398137 F8WDY8 70 aa16.3■□□□□ 0.2
U2AF1-203ENST00000398137 UNQ6190/PRO20217Q6UXQ8 127 aa16.3■□□□□ 0.2
U2AF1-203ENST00000398137 SDIM1Q6ZPB5 146 aa16.3■□□□□ 0.2
U2AF1-203ENST00000398137 COX7B2Q8TF08 81 aa16.3■□□□□ 0.2
U2AF1-203ENST00000398137 C6orf226Q5I0X4 101 aa16.29■□□□□ 0.2
U2AF1-203ENST00000398137 IGLV5-39A0A0G2JS06 123 aa16.28■□□□□ 0.2
U2AF1-203ENST00000398137 DPM2O94777 84 aa16.28■□□□□ 0.2
U2AF1-203ENST00000398137 C3orf79P0CE67 100 aa16.28■□□□□ 0.2
U2AF1-203ENST00000398137 PLNP26678 52 aa16.28■□□□□ 0.2
U2AF1-203ENST00000398137 KRTDAPP60985 99 aa16.28■□□□□ 0.2
U2AF1-203ENST00000398137 S100A2P29034 98 aa16.27■□□□□ 0.2
U2AF1-203ENST00000398137 CKS1BP61024 79 aa16.27■□□□□ 0.2
U2AF1-203ENST00000398137 TMEM223A0PJW6 202 aa16.26■□□□□ 0.19
U2AF1-203ENST00000398137 SCXQ7RTU7 201 aa16.26■□□□□ 0.19
U2AF1-203ENST00000398137 KRTAP3-3Q9BYR6 98 aa16.26■□□□□ 0.19
U2AF1-203ENST00000398137 KRTAP3-2Q9BYR7 98 aa16.26■□□□□ 0.19
U2AF1-203ENST00000398137 C6orf48Q9UBA6 75 aa16.26■□□□□ 0.19
U2AF1-203ENST00000398137 SNRPEP62304 92 aaKnown RBP16.25■□□□□ 0.19
U2AF1-203ENST00000398137 PET117Q6UWS5 81 aa16.25■□□□□ 0.19
U2AF1-203ENST00000398137 IGKCP01834 107 aa16.24■□□□□ 0.19
U2AF1-203ENST00000398137 HIST1H2BLQ99880 126 aa16.24■□□□□ 0.19
U2AF1-203ENST00000398137 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.24■□□□□ 0.19
U2AF1-203ENST00000398137 CHTF8P0CG12 524 aa16.23■□□□□ 0.19
U2AF1-203ENST00000398137 CXCL5P42830 114 aa16.23■□□□□ 0.19
U2AF1-203ENST00000398137 RNF151Q2KHN1 245 aa16.23■□□□□ 0.19
U2AF1-203ENST00000398137 LINC01545Q5VT33 79 aa16.23■□□□□ 0.19
U2AF1-203ENST00000398137 LINC00528Q8N1L1 170 aa16.23■□□□□ 0.19
U2AF1-203ENST00000398137 DMBT1Q9UGM3 2413 aaPredicted RBP16.23■□□□□ 0.19
U2AF1-203ENST00000398137 PANO1I0J062 215 aa16.22■□□□□ 0.19
U2AF1-203ENST00000398137 A0A096LNI7 61 aa16.21■□□□□ 0.19
U2AF1-203ENST00000398137 TRBV30A0A0K0K1B3 111 aa16.21■□□□□ 0.19
U2AF1-203ENST00000398137 LOC107984640A0A0U1RRK4 108 aa16.21■□□□□ 0.19
U2AF1-203ENST00000398137 PKIGQ9Y2B9 76 aa16.21■□□□□ 0.19
U2AF1-203ENST00000398137 IGKV2-24A0A0C4DH68 120 aa16.2■□□□□ 0.18
U2AF1-203ENST00000398137 C5orf52A6NGY3 159 aa16.19■□□□□ 0.18
U2AF1-203ENST00000398137 RPL18AQ02543 176 aaKnown RBP16.19■□□□□ 0.18
U2AF1-203ENST00000398137 C9orf116Q5BN46 136 aaPredicted RBP16.19■□□□□ 0.18
U2AF1-203ENST00000398137 KRTAP10-4P60372 401 aaPredicted RBP16.18■□□□□ 0.18
U2AF1-203ENST00000398137 CIRBP-AS1Q8TBR5 109 aa16.18■□□□□ 0.18
U2AF1-203ENST00000398137 GAGE2BQ13066 116 aa16.17■□□□□ 0.18
U2AF1-203ENST00000398137 SPACA4Q8TDM5 124 aa16.16■□□□□ 0.18
U2AF1-203ENST00000398137 TMA7Q9Y2S6 64 aaKnown RBP16.16■□□□□ 0.18
U2AF1-203ENST00000398137 C20orf202A1L168 122 aa16.15■□□□□ 0.18
U2AF1-203ENST00000398137 PTTG1IPP53801 180 aa16.15■□□□□ 0.18
U2AF1-203ENST00000398137 HERVK_113P61574 105 aa16.15■□□□□ 0.18
U2AF1-203ENST00000398137 CIRBPQ14011 172 aaKnown RBP16.15■□□□□ 0.18
U2AF1-203ENST00000398137 MAJINQ3KP22 176 aa16.14■□□□□ 0.17
U2AF1-203ENST00000398137 PLA2G1BP04054 148 aaKnown RBP16.13■□□□□ 0.17
U2AF1-203ENST00000398137 TLX1NBP0CAT3 122 aa16.13■□□□□ 0.17
U2AF1-203ENST00000398137 DPH3Q96FX2 82 aa16.13■□□□□ 0.17
U2AF1-203ENST00000398137 Q6ZRP5 223 aa16.12■□□□□ 0.17
U2AF1-203ENST00000398137 LRP1Q07954 4544 aaKnown RBP16.12■□□□□ 0.17
U2AF1-203ENST00000398137 LEPROTO15243 131 aa16.11■□□□□ 0.17
U2AF1-203ENST00000398137 TSPEAR-AS2P59090 65 aa16.11■□□□□ 0.17
U2AF1-203ENST00000398137 LINC00474Q9P2X8 69 aa16.11■□□□□ 0.17
U2AF1-203ENST00000398137 NDUFC2-KCTD14E9PQ53 114 aa16.1■□□□□ 0.17
U2AF1-203ENST00000398137 GAGE2EQ4V326 116 aa16.1■□□□□ 0.17
U2AF1-203ENST00000398137 ZNF625Q96I27 306 aaPredicted RBP16.1■□□□□ 0.17
U2AF1-203ENST00000398137 GAGE2DQ9UEU5 116 aa16.1■□□□□ 0.17
U2AF1-203ENST00000398137 PLEKHB2Q96CS7 222 aa16.09■□□□□ 0.17
U2AF1-203ENST00000398137 A0A087WYN8 130 aa16.08■□□□□ 0.16
U2AF1-203ENST00000398137 SFTA2Q6UW10 78 aa16.08■□□□□ 0.16
U2AF1-203ENST00000398137 ATOH7Q8N100 152 aa16.08■□□□□ 0.16
U2AF1-203ENST00000398137 PKHD1L1Q86WI1 4243 aa16.07■□□□□ 0.16
U2AF1-203ENST00000398137 STPG4Q8N801 248 aa16.07■□□□□ 0.16
U2AF1-203ENST00000398137 NDUFA12Q9UI09 145 aa16.07■□□□□ 0.16
U2AF1-203ENST00000398137 FAT3Q8TDW7 4589 aa16.07■□□□□ 0.16
U2AF1-203ENST00000398137 J3QQQ9 107 aa16.06■□□□□ 0.16
U2AF1-203ENST00000398137 E9PLD3 99 aa16.05■□□□□ 0.16
U2AF1-203ENST00000398137 LGALS3P17931 250 aaKnown RBP16.04■□□□□ 0.16
U2AF1-203ENST00000398137 PLAC8Q9NZF1 115 aa16.04■□□□□ 0.16
U2AF1-203ENST00000398137 ERG28Q9UKR5 140 aa16.04■□□□□ 0.16
U2AF1-203ENST00000398137 PFN2P35080 140 aa16.03■□□□□ 0.16
U2AF1-203ENST00000398137 KRTAP29-1A8MX34 341 aaPredicted RBP16.02■□□□□ 0.16
U2AF1-203ENST00000398137 MYMXA0A1B0GTQ4 84 aa16.01■□□□□ 0.15
U2AF1-203ENST00000398137 AKR1D1P51857 326 aa16.01■□□□□ 0.15
U2AF1-203ENST00000398137 XAGE1AQ9HD64 81 aa16.01■□□□□ 0.15
U2AF1-203ENST00000398137 C9orf129Q5T035 196 aaKnown RBP16■□□□□ 0.15
U2AF1-203ENST00000398137 A0A1W2PNN7 141 aa15.99■□□□□ 0.15
U2AF1-203ENST00000398137 HERV-K104P63124 156 aa15.99■□□□□ 0.15
U2AF1-203ENST00000398137 IGKV2D-26A0A0A0MRZ7 120 aa15.98■□□□□ 0.15
U2AF1-203ENST00000398137 FAM168BA1KXE4 195 aa15.98■□□□□ 0.15
U2AF1-203ENST00000398137 J3QL48 77 aa15.97■□□□□ 0.15
U2AF1-203ENST00000398137 SCGB1D1O95968 90 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms