RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 COL4A3Q01955 1670 aa7.58□□□□□ -1.2
COL4A4-201ENST00000396625 LINC00575Q6W349 94 aa7.58□□□□□ -1.2
COL4A4-201ENST00000396625 Q8N6K4 173 aa7.57□□□□□ -1.2
COL4A4-201ENST00000396625 TRBV10-3A0A0K0K1G6 114 aa7.57□□□□□ -1.2
COL4A4-201ENST00000396625 ADORA2A-AS1P86434 159 aa7.57□□□□□ -1.2
COL4A4-201ENST00000396625 IGLV2-11P01706 119 aa7.56□□□□□ -1.2
COL4A4-201ENST00000396625 PLA2G2CQ5R387 149 aa7.56□□□□□ -1.2
COL4A4-201ENST00000396625 A0A1B0GU69 56 aa7.56□□□□□ -1.2
COL4A4-201ENST00000396625 CYSRT1A8MQ03 144 aa7.56□□□□□ -1.2
COL4A4-201ENST00000396625 Q9BRP9 147 aa7.56□□□□□ -1.2
COL4A4-201ENST00000396625 hDV103S1A0JD37 113 aa7.56□□□□□ -1.2
COL4A4-201ENST00000396625 C9orf116Q5BN46 136 aaPredicted RBP7.56□□□□□ -1.2
COL4A4-201ENST00000396625 PIP4P1Q86T03 277 aa7.56□□□□□ -1.2
COL4A4-201ENST00000396625 IGFL2Q6UWQ7 119 aa7.56□□□□□ -1.2
COL4A4-201ENST00000396625 CRIP2P52943 208 aaPredicted RBP7.55□□□□□ -1.2
COL4A4-201ENST00000396625 LINC00482Q8N8I6 264 aa7.55□□□□□ -1.2
COL4A4-201ENST00000396625 C1orf64Q8NEQ6 169 aa7.55□□□□□ -1.2
COL4A4-201ENST00000396625 Q9UF83 564 aa7.54□□□□□ -1.2
COL4A4-201ENST00000396625 IGKV2D-30A0A075B6S6 120 aa7.54□□□□□ -1.2
COL4A4-201ENST00000396625 C8orf87E5RJ46 101 aa7.54□□□□□ -1.2
COL4A4-201ENST00000396625 TNFRSF13BO14836 293 aaPredicted RBP7.54□□□□□ -1.2
COL4A4-201ENST00000396625 IGKV2-30P06310 120 aa7.54□□□□□ -1.2
COL4A4-201ENST00000396625 RNASE3P12724 160 aaKnown RBP7.54□□□□□ -1.2
COL4A4-201ENST00000396625 LY6G6CO95867 125 aa7.54□□□□□ -1.2
COL4A4-201ENST00000396625 EPG5Q9HCE0 2579 aa7.53□□□□□ -1.2
COL4A4-201ENST00000396625 BPTFQ12830 3046 aa7.53□□□□□ -1.2
COL4A4-201ENST00000396625 PRR3P79522 188 aaKnown RBP7.53□□□□□ -1.2
COL4A4-201ENST00000396625 PLA2G5P39877 138 aa7.53□□□□□ -1.2
COL4A4-201ENST00000396625 MSMPQ1L6U9 139 aa7.53□□□□□ -1.2
COL4A4-201ENST00000396625 FSTL3O95633 263 aa7.53□□□□□ -1.2
COL4A4-201ENST00000396625 DEFB116Q30KQ4 102 aa7.53□□□□□ -1.2
COL4A4-201ENST00000396625 Q6YL49 198 aa7.53□□□□□ -1.2
COL4A4-201ENST00000396625 LINC00574Q9H8X3 128 aa7.52□□□□□ -1.21
COL4A4-201ENST00000396625 PRR9Q5T870 116 aa7.51□□□□□ -1.21
COL4A4-201ENST00000396625 CDC42SE2Q9NRR3 84 aa7.5□□□□□ -1.21
COL4A4-201ENST00000396625 C4orf26Q17RF5 130 aa7.5□□□□□ -1.21
COL4A4-201ENST00000396625 UNQ6190/PRO20217Q6UXQ8 127 aa7.5□□□□□ -1.21
COL4A4-201ENST00000396625 KLLNB2CW77 178 aa7.5□□□□□ -1.21
COL4A4-201ENST00000396625 A0A087WSZ3 146 aa7.49□□□□□ -1.21
COL4A4-201ENST00000396625 IGLV5-52A0A0A0MRZ9 124 aa7.49□□□□□ -1.21
COL4A4-201ENST00000396625 EGFEM1PQ0D2K5 195 aa7.49□□□□□ -1.21
COL4A4-201ENST00000396625 ZNF295-AS1Q8N0V1 137 aa7.49□□□□□ -1.21
COL4A4-201ENST00000396625 ATP11AUNQ6ZP68 121 aa7.49□□□□□ -1.21
COL4A4-201ENST00000396625 ZNF702PQ9H963 129 aa7.49□□□□□ -1.21
COL4A4-201ENST00000396625 NUPR2A6NF83 97 aa7.48□□□□□ -1.21
COL4A4-201ENST00000396625 LINC01556Q5JQF7 62 aa7.48□□□□□ -1.21
COL4A4-201ENST00000396625 ACYP2P14621 99 aa7.48□□□□□ -1.21
COL4A4-201ENST00000396625 Q6ZSV7 163 aa7.48□□□□□ -1.21
COL4A4-201ENST00000396625 FBXL19-AS1Q494R0 122 aa7.48□□□□□ -1.21
COL4A4-201ENST00000396625 C6orf48Q9UBA6 75 aa7.48□□□□□ -1.21
COL4A4-201ENST00000396625 GAS8-AS1O95177 125 aa7.48□□□□□ -1.21
COL4A4-201ENST00000396625 PRM2P04554 102 aa7.48□□□□□ -1.21
COL4A4-201ENST00000396625 CNFNQ9BYD5 112 aa7.48□□□□□ -1.21
COL4A4-201ENST00000396625 COX6A2Q02221 97 aa7.47□□□□□ -1.21
COL4A4-201ENST00000396625 Q6ZTC4 211 aa7.47□□□□□ -1.21
COL4A4-201ENST00000396625 C2orf48Q96LS8 159 aa7.47□□□□□ -1.21
COL4A4-201ENST00000396625 POLR2KP53803 58 aaKnown RBP7.47□□□□□ -1.21
COL4A4-201ENST00000396625 IGIPA6NJ69 53 aa7.47□□□□□ -1.21
COL4A4-201ENST00000396625 ADAMTSL4-AS1Q5T5F5 129 aa7.47□□□□□ -1.21
COL4A4-201ENST00000396625 SMIM1B2RUZ4 78 aa7.46□□□□□ -1.21
COL4A4-201ENST00000396625 BCE1O60756 84 aa7.46□□□□□ -1.21
COL4A4-201ENST00000396625 C6orf223Q8N319 242 aa7.46□□□□□ -1.21
COL4A4-201ENST00000396625 LINC00242Q5T6M2 205 aa7.46□□□□□ -1.22
COL4A4-201ENST00000396625 SMIM29Q86T20 159 aa7.45□□□□□ -1.22
COL4A4-201ENST00000396625 IGLV8-61A0A075B6I0 122 aa7.45□□□□□ -1.22
COL4A4-201ENST00000396625 BRWD1-AS2P59051 145 aa7.45□□□□□ -1.22
COL4A4-201ENST00000396625 INAFM1C9JVW0 142 aa7.45□□□□□ -1.22
COL4A4-201ENST00000396625 TP53AIP1Q9HCN2 124 aa7.45□□□□□ -1.22
COL4A4-201ENST00000396625 MRGPRG-AS1Q2M3A8 158 aa7.44□□□□□ -1.22
COL4A4-201ENST00000396625 SSBP3-AS1Q7Z2R9 100 aa7.44□□□□□ -1.22
COL4A4-201ENST00000396625 TSPEAR-AS2P59090 65 aa7.44□□□□□ -1.22
COL4A4-201ENST00000396625 C10orf99Q6UWK7 81 aa7.44□□□□□ -1.22
COL4A4-201ENST00000396625 SHISA2Q6UWI4 295 aa7.44□□□□□ -1.22
COL4A4-201ENST00000396625 LMO4P61968 165 aa7.44□□□□□ -1.22
COL4A4-201ENST00000396625 LINC00846Q9NV44 126 aa7.44□□□□□ -1.22
COL4A4-201ENST00000396625 C11orf21Q9P2W6 132 aa7.43□□□□□ -1.22
COL4A4-201ENST00000396625 CEP295Q9C0D2 2601 aa7.43□□□□□ -1.22
COL4A4-201ENST00000396625 A8MTW9 85 aa7.43□□□□□ -1.22
COL4A4-201ENST00000396625 Q6ZPA2 131 aa7.43□□□□□ -1.22
COL4A4-201ENST00000396625 C1orf229Q6ZS94 237 aaPredicted RBP7.43□□□□□ -1.22
COL4A4-201ENST00000396625 LINC00337Q8N6G1 96 aa7.42□□□□□ -1.22
COL4A4-201ENST00000396625 A0A1B0GW54 56 aa7.4□□□□□ -1.22
COL4A4-201ENST00000396625 F8WDY8 70 aa7.4□□□□□ -1.22
COL4A4-201ENST00000396625 C18orf65Q6ZTR6 163 aa7.4□□□□□ -1.22
COL4A4-201ENST00000396625 MUC22E2RYF6 1773 aaPredicted RBP7.4□□□□□ -1.23
COL4A4-201ENST00000396625 FSHBP01225 129 aa7.4□□□□□ -1.23
COL4A4-201ENST00000396625 CHCHD7Q9BUK0 85 aa7.4□□□□□ -1.23
COL4A4-201ENST00000396625 PSMG3-AS1Q96PY0 264 aa7.39□□□□□ -1.23
COL4A4-201ENST00000396625 CRIP3Q6Q6R5 217 aa7.39□□□□□ -1.23
COL4A4-201ENST00000396625 CDIP1Q9H305 208 aa7.38□□□□□ -1.23
COL4A4-201ENST00000396625 MDFIQ99750 246 aa7.38□□□□□ -1.23
COL4A4-201ENST00000396625 CD164Q04900 197 aa7.37□□□□□ -1.23
COL4A4-201ENST00000396625 AMELXQ99217 191 aa7.37□□□□□ -1.23
COL4A4-201ENST00000396625 IGLV4-60A0A075B6I1 120 aa7.36□□□□□ -1.23
COL4A4-201ENST00000396625 LINC00310P59036 64 aa7.35□□□□□ -1.23
COL4A4-201ENST00000396625 OXLD1Q5BKU9 147 aa7.35□□□□□ -1.23
COL4A4-201ENST00000396625 TRAV22A0A0B4J277 110 aa7.35□□□□□ -1.23
COL4A4-201ENST00000396625 ZNF580Q9UK33 172 aa7.35□□□□□ -1.23
COL4A4-201ENST00000396625 H3BPC8 53 aa7.34□□□□□ -1.23
COL4A4-201ENST00000396625 Q8N2B8 174 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms