RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 PTH2Q96A98 100 aa5.98□□□□□ -1.45
CRNKL1-202ENST00000377340 E9PLD3 99 aa5.97□□□□□ -1.45
CRNKL1-202ENST00000377340 ESRGQ1W209 222 aa5.97□□□□□ -1.45
CRNKL1-202ENST00000377340 CDC42SE2Q9NRR3 84 aa5.97□□□□□ -1.45
CRNKL1-202ENST00000377340 UFSP1Q6NVU6 142 aa5.97□□□□□ -1.45
CRNKL1-202ENST00000377340 WWC2-AS2Q96NR7 200 aa5.97□□□□□ -1.45
CRNKL1-202ENST00000377340 POM121L12Q8N7R1 296 aa5.97□□□□□ -1.45
CRNKL1-202ENST00000377340 FOXI1Q12951 378 aa5.96□□□□□ -1.45
CRNKL1-202ENST00000377340 FBN2P35556 2912 aa5.96□□□□□ -1.45
CRNKL1-202ENST00000377340 IGLV4-69A0A075B6H9 119 aa5.96□□□□□ -1.46
CRNKL1-202ENST00000377340 CEND1Q8N111 149 aa5.96□□□□□ -1.46
CRNKL1-202ENST00000377340 Q8NAQ8 132 aa5.96□□□□□ -1.46
CRNKL1-202ENST00000377340 IGKV2-28A0A075B6P5 120 aa5.95□□□□□ -1.46
CRNKL1-202ENST00000377340 IGKV2D-28P01615 120 aa5.95□□□□□ -1.46
CRNKL1-202ENST00000377340 USP17L23D6RBM5 183 aa5.95□□□□□ -1.46
CRNKL1-202ENST00000377340 BVES-AS1Q5T3Y7 98 aa5.95□□□□□ -1.46
CRNKL1-202ENST00000377340 UNQ6190/PRO20217Q6UXQ8 127 aa5.95□□□□□ -1.46
CRNKL1-202ENST00000377340 PYGO1Q9Y3Y4 419 aa5.94□□□□□ -1.46
CRNKL1-202ENST00000377340 CFC1BP0CG36 223 aa5.94□□□□□ -1.46
CRNKL1-202ENST00000377340 CFC1P0CG37 223 aa5.94□□□□□ -1.46
CRNKL1-202ENST00000377340 C9orf116Q5BN46 136 aaPredicted RBP5.94□□□□□ -1.46
CRNKL1-202ENST00000377340 TP73-AS1Q9UF72 201 aa5.94□□□□□ -1.46
CRNKL1-202ENST00000377340 IFITM1P13164 125 aa5.94□□□□□ -1.46
CRNKL1-202ENST00000377340 COX8CQ7Z4L0 72 aa5.94□□□□□ -1.46
CRNKL1-202ENST00000377340 IGLV5-52A0A0A0MRZ9 124 aa5.93□□□□□ -1.46
CRNKL1-202ENST00000377340 FAM19A1Q7Z5A9 133 aa5.93□□□□□ -1.46
CRNKL1-202ENST00000377340 PPDPFQ9H3Y8 114 aa5.93□□□□□ -1.46
CRNKL1-202ENST00000377340 COX6A2Q02221 97 aa5.93□□□□□ -1.46
CRNKL1-202ENST00000377340 C4orf48Q5BLP8 95 aa5.93□□□□□ -1.46
CRNKL1-202ENST00000377340 LINC00242Q5T6M2 205 aa5.93□□□□□ -1.46
CRNKL1-202ENST00000377340 C7orf33Q8WU49 177 aa5.93□□□□□ -1.46
CRNKL1-202ENST00000377340 A0A0J9YXY3 114 aa5.93□□□□□ -1.46
CRNKL1-202ENST00000377340 RPL37AP8A6NKH3 93 aa5.92□□□□□ -1.46
CRNKL1-202ENST00000377340 CHCHD7Q9BUK0 85 aa5.92□□□□□ -1.46
CRNKL1-202ENST00000377340 J3KT08 172 aa5.92□□□□□ -1.46
CRNKL1-202ENST00000377340 GAGE2AQ6NT46 116 aa5.92□□□□□ -1.46
CRNKL1-202ENST00000377340 Q8N3U1 123 aa5.92□□□□□ -1.46
CRNKL1-202ENST00000377340 IGKV2D-26A0A0A0MRZ7 120 aa5.92□□□□□ -1.46
CRNKL1-202ENST00000377340 FXYD2P54710 66 aa5.92□□□□□ -1.46
CRNKL1-202ENST00000377340 C6orf223Q8N319 242 aa5.91□□□□□ -1.46
CRNKL1-202ENST00000377340 UBE2D1P51668 147 aa5.91□□□□□ -1.46
CRNKL1-202ENST00000377340 KLK9Q2XQG4 91 aa5.91□□□□□ -1.46
CRNKL1-202ENST00000377340 DIRC1Q969H9 104 aa5.91□□□□□ -1.46
CRNKL1-202ENST00000377340 C19orf73Q9NVV2 129 aa5.91□□□□□ -1.46
CRNKL1-202ENST00000377340 TMEM223A0PJW6 202 aa5.91□□□□□ -1.46
CRNKL1-202ENST00000377340 BRK1Q8WUW1 75 aa5.91□□□□□ -1.46
CRNKL1-202ENST00000377340 IGIPA6NJ69 53 aa5.9□□□□□ -1.46
CRNKL1-202ENST00000377340 FAM19A4Q96LR4 140 aa5.9□□□□□ -1.46
CRNKL1-202ENST00000377340 KIF25-AS1Q9Y6Z4 181 aa5.9□□□□□ -1.46
CRNKL1-202ENST00000377340 H3BMG7 143 aa5.9□□□□□ -1.46
CRNKL1-202ENST00000377340 HRNRQ86YZ3 2850 aaPredicted RBP5.9□□□□□ -1.47
CRNKL1-202ENST00000377340 MRPS36P82909 103 aaKnown RBP5.9□□□□□ -1.47
CRNKL1-202ENST00000377340 NTM-AS1Q6ZSK4 140 aa5.9□□□□□ -1.47
CRNKL1-202ENST00000377340 SPATA12Q7Z6I5 190 aa5.9□□□□□ -1.47
CRNKL1-202ENST00000377340 MAPKAPK5-AS1Q8N8E1 139 aa5.89□□□□□ -1.47
CRNKL1-202ENST00000377340 IBA57-AS1B1ANH7 110 aa5.89□□□□□ -1.47
CRNKL1-202ENST00000377340 HIST1H4AP62805 103 aaKnown RBP5.89□□□□□ -1.47
CRNKL1-202ENST00000377340 HAMPP81172 84 aa5.89□□□□□ -1.47
CRNKL1-202ENST00000377340 LINC01620Q4KN68 170 aa5.89□□□□□ -1.47
CRNKL1-202ENST00000377340 HRCT1Q6UXD1 115 aa5.89□□□□□ -1.47
CRNKL1-202ENST00000377340 DSCR8Q96T75 97 aa5.89□□□□□ -1.47
CRNKL1-202ENST00000377340 SPANXCQ9NY87 97 aa5.89□□□□□ -1.47
CRNKL1-202ENST00000377340 LOC107984640A0A0U1RRK4 108 aa5.88□□□□□ -1.47
CRNKL1-202ENST00000377340 GIG44P09565 113 aaPredicted RBP5.88□□□□□ -1.47
CRNKL1-202ENST00000377340 LINC00588Q9Y4M8 146 aa5.88□□□□□ -1.47
CRNKL1-202ENST00000377340 C1orf195Q5TG92 126 aa5.88□□□□□ -1.47
CRNKL1-202ENST00000377340 CSNK1G2-AS1Q8NCQ2 148 aa5.88□□□□□ -1.47
CRNKL1-202ENST00000377340 LINC00315P59091 139 aa5.88□□□□□ -1.47
CRNKL1-202ENST00000377340 CSDC2Q9Y534 153 aaKnown RBP5.88□□□□□ -1.47
CRNKL1-202ENST00000377340 K7EP34 96 aa5.87□□□□□ -1.47
CRNKL1-202ENST00000377340 BAALC-AS2P0C853 105 aa5.87□□□□□ -1.47
CRNKL1-202ENST00000377340 MRPL55Q7Z7F7 128 aaKnown RBP5.87□□□□□ -1.47
CRNKL1-202ENST00000377340 URB1-AS1Q96HZ7 61 aa5.87□□□□□ -1.47
CRNKL1-202ENST00000377340 DMBT1Q9UGM3 2413 aaPredicted RBP5.87□□□□□ -1.47
CRNKL1-202ENST00000377340 A0A1B0GUV1 79 aa5.86□□□□□ -1.47
CRNKL1-202ENST00000377340 COX7BP24311 80 aa5.86□□□□□ -1.47
CRNKL1-202ENST00000377340 LINC00308Q8TCZ7 52 aa5.86□□□□□ -1.47
CRNKL1-202ENST00000377340 CLEC2BQ92478 149 aa5.86□□□□□ -1.47
CRNKL1-202ENST00000377340 ORMDL1Q9P0S3 153 aa5.86□□□□□ -1.47
CRNKL1-202ENST00000377340 C9orf118A6NHY6 69 aa5.86□□□□□ -1.47
CRNKL1-202ENST00000377340 EGFEM1PQ0D2K5 195 aa5.86□□□□□ -1.47
CRNKL1-202ENST00000377340 C6orf99Q4VX62 202 aa5.86□□□□□ -1.47
CRNKL1-202ENST00000377340 hADV29S1A0JD25 119 aa5.85□□□□□ -1.47
CRNKL1-202ENST00000377340 PRR3P79522 188 aaKnown RBP5.85□□□□□ -1.47
CRNKL1-202ENST00000377340 SMIM1B2RUZ4 78 aa5.85□□□□□ -1.47
CRNKL1-202ENST00000377340 H0YGX0 51 aa5.85□□□□□ -1.47
CRNKL1-202ENST00000377340 WFDC2Q14508 124 aa5.85□□□□□ -1.47
CRNKL1-202ENST00000377340 LINC01556Q5JQF7 62 aa5.85□□□□□ -1.47
CRNKL1-202ENST00000377340 NBDYA0A0U1RRE5 68 aa5.85□□□□□ -1.47
CRNKL1-202ENST00000377340 MT-ATP8P03928 68 aa5.85□□□□□ -1.47
CRNKL1-202ENST00000377340 Q8IZM0 81 aa5.85□□□□□ -1.47
CRNKL1-202ENST00000377340 CCDC179H3BU77 68 aa5.85□□□□□ -1.47
CRNKL1-202ENST00000377340 SMG1Q96Q15 3661 aaKnown RBP5.84□□□□□ -1.47
CRNKL1-202ENST00000377340 MXRA5Q9NR99 2828 aa5.84□□□□□ -1.47
CRNKL1-202ENST00000377340 TAX1BP3O14907 124 aa5.84□□□□□ -1.47
CRNKL1-202ENST00000377340 A0A1W2PPM0 123 aa5.83□□□□□ -1.48
CRNKL1-202ENST00000377340 LINC00310P59036 64 aa5.83□□□□□ -1.48
CRNKL1-202ENST00000377340 Q6ZRU5 148 aa5.83□□□□□ -1.48
CRNKL1-202ENST00000377340 NTN5Q8WTR8 489 aaPredicted RBP5.83□□□□□ -1.48
CRNKL1-202ENST00000377340 TM2D3Q9BRN9 247 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms