RNA–Protein interactions for RNA: ENST00000376836.7

COMMD3-201, Transcript of COMM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-201ENST00000376836 C2orf82Q6UX34 121 aa17.2■□□□□ 0.34
COMMD3-201ENST00000376836 C6orf48Q9UBA6 75 aa17.2■□□□□ 0.34
COMMD3-201ENST00000376836 IGLC3P0DOY3 106 aa17.19■□□□□ 0.34
COMMD3-201ENST00000376836 RPL37AP61513 92 aaKnown RBP17.18■□□□□ 0.34
COMMD3-201ENST00000376836 C7orf33Q8WU49 177 aa17.18■□□□□ 0.34
COMMD3-201ENST00000376836 IFI27L1Q96BM0 104 aa17.18■□□□□ 0.34
COMMD3-201ENST00000376836 SMIM1B2RUZ4 78 aa17.17■□□□□ 0.34
COMMD3-201ENST00000376836 FAM19A2Q8N3H0 131 aa17.17■□□□□ 0.34
COMMD3-201ENST00000376836 SERF1AO75920 110 aa17.16■□□□□ 0.34
COMMD3-201ENST00000376836 SPINK8P0C7L1 97 aa17.16■□□□□ 0.34
COMMD3-201ENST00000376836 CXCL5P42830 114 aa17.16■□□□□ 0.34
COMMD3-201ENST00000376836 VPS13BQ7Z7G8 4022 aa17.16■□□□□ 0.34
COMMD3-201ENST00000376836 TLX1NBP0CAT3 122 aa17.15■□□□□ 0.34
COMMD3-201ENST00000376836 COX7B2Q8TF08 81 aa17.15■□□□□ 0.34
COMMD3-201ENST00000376836 CHTOPQ9Y3Y2 248 aaKnown RBP17.15■□□□□ 0.34
COMMD3-201ENST00000376836 TRAV12-1A0A0B4J245 112 aa17.12■□□□□ 0.33
COMMD3-201ENST00000376836 F8VRH5 84 aa17.12■□□□□ 0.33
COMMD3-201ENST00000376836 LEPROTL1O95214 131 aa17.11■□□□□ 0.33
COMMD3-201ENST00000376836 Q6ZRP5 223 aa17.11■□□□□ 0.33
COMMD3-201ENST00000376836 NDUFC2-KCTD14E9PQ53 114 aa17.1■□□□□ 0.33
COMMD3-201ENST00000376836 GAGE2EQ4V326 116 aa17.1■□□□□ 0.33
COMMD3-201ENST00000376836 TMEM170BQ5T4T1 132 aa17.1■□□□□ 0.33
COMMD3-201ENST00000376836 GAGE2DQ9UEU5 116 aa17.1■□□□□ 0.33
COMMD3-201ENST00000376836 ZNF22P17026 224 aaPredicted RBP17.09■□□□□ 0.33
COMMD3-201ENST00000376836 HSPB8Q9UJY1 196 aa17.08■□□□□ 0.32
COMMD3-201ENST00000376836 C11orf86A6NJI1 115 aa17.07■□□□□ 0.32
COMMD3-201ENST00000376836 C9orf116Q5BN46 136 aaPredicted RBP17.07■□□□□ 0.32
COMMD3-201ENST00000376836 S100A1P23297 94 aa17.06■□□□□ 0.32
COMMD3-201ENST00000376836 LINC00310P59036 64 aa17.06■□□□□ 0.32
COMMD3-201ENST00000376836 SRRM2Q9UQ35 2752 aaKnown RBP17.05■□□□□ 0.32
COMMD3-201ENST00000376836 A0A1W2PNN7 141 aa17.04■□□□□ 0.32
COMMD3-201ENST00000376836 H0Y8G0 127 aa17.04■□□□□ 0.32
COMMD3-201ENST00000376836 NUPR1O60356 82 aa17.03■□□□□ 0.32
COMMD3-201ENST00000376836 HIST1H2BKO60814 126 aa17.03■□□□□ 0.32
COMMD3-201ENST00000376836 HIST1H2BJP06899 126 aa17.03■□□□□ 0.32
COMMD3-201ENST00000376836 FABP4P15090 132 aa17.03■□□□□ 0.32
COMMD3-201ENST00000376836 HIST1H2BOP23527 126 aa17.03■□□□□ 0.32
COMMD3-201ENST00000376836 HIST1H2BBP33778 126 aa17.03■□□□□ 0.32
COMMD3-201ENST00000376836 HIST1H2BDP58876 126 aa17.03■□□□□ 0.32
COMMD3-201ENST00000376836 HIST1H2BCP62807 126 aa17.03■□□□□ 0.32
COMMD3-201ENST00000376836 HIST2H2BEQ16778 126 aa17.03■□□□□ 0.32
COMMD3-201ENST00000376836 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.03■□□□□ 0.32
COMMD3-201ENST00000376836 HIST1H2BHQ93079 126 aa17.03■□□□□ 0.32
COMMD3-201ENST00000376836 HIST1H2BNQ99877 126 aa17.03■□□□□ 0.32
COMMD3-201ENST00000376836 HIST1H2BMQ99879 126 aa17.03■□□□□ 0.32
COMMD3-201ENST00000376836 IGLV5-39A0A0G2JS06 123 aa17.02■□□□□ 0.32
COMMD3-201ENST00000376836 KRTAP10-4P60372 401 aaPredicted RBP17.02■□□□□ 0.32
COMMD3-201ENST00000376836 HERC1Q15751 4861 aa16.99■□□□□ 0.31
COMMD3-201ENST00000376836 SFTA2Q6UW10 78 aa16.96■□□□□ 0.31
COMMD3-201ENST00000376836 FAM19A5Q7Z5A7 132 aaPredicted RBP16.96■□□□□ 0.31
COMMD3-201ENST00000376836 MAP1LC3CQ9BXW4 147 aa16.96■□□□□ 0.31
COMMD3-201ENST00000376836 FAM168BA1KXE4 195 aa16.96■□□□□ 0.3
COMMD3-201ENST00000376836 ODF1Q14990 250 aa16.96■□□□□ 0.3
COMMD3-201ENST00000376836 TMEM223A0PJW6 202 aa16.95■□□□□ 0.3
COMMD3-201ENST00000376836 ATP6V1G1O75348 118 aa16.94■□□□□ 0.3
COMMD3-201ENST00000376836 C9orf129Q5T035 196 aaKnown RBP16.94■□□□□ 0.3
COMMD3-201ENST00000376836 PLNP26678 52 aa16.93■□□□□ 0.3
COMMD3-201ENST00000376836 PRR3P79522 188 aaKnown RBP16.93■□□□□ 0.3
COMMD3-201ENST00000376836 PHF5AQ7RTV0 110 aaKnown RBP16.93■□□□□ 0.3
COMMD3-201ENST00000376836 XAGE1AQ9HD64 81 aa16.92■□□□□ 0.3
COMMD3-201ENST00000376836 M0QXV9 152 aa16.89■□□□□ 0.29
COMMD3-201ENST00000376836 DPM2O94777 84 aa16.89■□□□□ 0.29
COMMD3-201ENST00000376836 PFN2P35080 140 aa16.89■□□□□ 0.29
COMMD3-201ENST00000376836 COX17Q14061 63 aa16.87■□□□□ 0.29
COMMD3-201ENST00000376836 ERG28Q9UKR5 140 aa16.87■□□□□ 0.29
COMMD3-201ENST00000376836 HNRNPA3P51991 378 aaKnown RBP16.86■□□□□ 0.29
COMMD3-201ENST00000376836 UBE2BP63146 152 aa16.86■□□□□ 0.29
COMMD3-201ENST00000376836 ZNF625Q96I27 306 aaPredicted RBP16.86■□□□□ 0.29
COMMD3-201ENST00000376836 IGKCP01834 107 aa16.85■□□□□ 0.29
COMMD3-201ENST00000376836 HERVK_113P61574 105 aa16.84■□□□□ 0.29
COMMD3-201ENST00000376836 PMCHL2Q9BQD1 86 aa16.84■□□□□ 0.29
COMMD3-201ENST00000376836 LBHQ53QV2 105 aaPredicted RBP16.83■□□□□ 0.28
COMMD3-201ENST00000376836 COA6Q5JTJ3 125 aaKnown RBP16.83■□□□□ 0.28
COMMD3-201ENST00000376836 PSORS1C2Q9UIG4 136 aa16.83■□□□□ 0.28
COMMD3-201ENST00000376836 J3QL48 77 aa16.82■□□□□ 0.28
COMMD3-201ENST00000376836 KRTAP7-1Q8IUC3 87 aa16.82■□□□□ 0.28
COMMD3-201ENST00000376836 SERTAD4-AS1Q5TG53 156 aa16.81■□□□□ 0.28
COMMD3-201ENST00000376836 C22orf24Q9Y442 160 aa16.81■□□□□ 0.28
COMMD3-201ENST00000376836 SYS1-DBNDD2H3BUS1 97 aa16.8■□□□□ 0.28
COMMD3-201ENST00000376836 FLG2Q5D862 2391 aaPredicted RBP16.79■□□□□ 0.28
COMMD3-201ENST00000376836 KRTAP29-1A8MX34 341 aaPredicted RBP16.79■□□□□ 0.28
COMMD3-201ENST00000376836 OXTP01178 125 aa16.79■□□□□ 0.28
COMMD3-201ENST00000376836 HERV-K104P63124 156 aa16.79■□□□□ 0.28
COMMD3-201ENST00000376836 C1orf137Q5JT78 98 aa16.79■□□□□ 0.28
COMMD3-201ENST00000376836 PLEKHB2Q96CS7 222 aa16.79■□□□□ 0.28
COMMD3-201ENST00000376836 LEPROTO15243 131 aa16.78■□□□□ 0.28
COMMD3-201ENST00000376836 LINC00158P58513 81 aa16.78■□□□□ 0.28
COMMD3-201ENST00000376836 PLA2G2DQ9UNK4 145 aa16.78■□□□□ 0.28
COMMD3-201ENST00000376836 MYMXA0A1B0GTQ4 84 aa16.77■□□□□ 0.28
COMMD3-201ENST00000376836 MYCBP2O75592 4640 aa16.77■□□□□ 0.27
COMMD3-201ENST00000376836 LINC00587B1AMM8 73 aa16.76■□□□□ 0.27
COMMD3-201ENST00000376836 SPINK6Q6UWN8 80 aa16.76■□□□□ 0.27
COMMD3-201ENST00000376836 PET117Q6UWS5 81 aa16.76■□□□□ 0.27
COMMD3-201ENST00000376836 TP73-AS1Q9UF72 201 aa16.76■□□□□ 0.27
COMMD3-201ENST00000376836 NDUFA12Q9UI09 145 aa16.76■□□□□ 0.27
COMMD3-201ENST00000376836 MEIG1Q5JSS6 88 aa16.75■□□□□ 0.27
COMMD3-201ENST00000376836 NKAPP1Q8N9T2 125 aa16.75■□□□□ 0.27
COMMD3-201ENST00000376836 SND1-IT1Q9HBX3 110 aa16.75■□□□□ 0.27
COMMD3-201ENST00000376836 MRPL55Q7Z7F7 128 aaKnown RBP16.74■□□□□ 0.27
COMMD3-201ENST00000376836 PKHD1L1Q86WI1 4243 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms