RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 Q6ZSV7 163 aa9.09□□□□□ -0.95
HCFC1-202ENST00000369984 PRLHP81277 87 aa9.09□□□□□ -0.95
HCFC1-202ENST00000369984 CDC42SE2Q9NRR3 84 aa9.09□□□□□ -0.95
HCFC1-202ENST00000369984 CYSRT1A8MQ03 144 aa9.08□□□□□ -0.96
HCFC1-202ENST00000369984 REG3GQ6UW15 175 aa9.08□□□□□ -0.96
HCFC1-202ENST00000369984 C18orf65Q6ZTR6 163 aa9.08□□□□□ -0.96
HCFC1-202ENST00000369984 PSMG3-AS1Q96PY0 264 aa9.08□□□□□ -0.96
HCFC1-202ENST00000369984 GAS8-AS1O95177 125 aa9.08□□□□□ -0.96
HCFC1-202ENST00000369984 PRORYQ9H606 182 aa9.08□□□□□ -0.96
HCFC1-202ENST00000369984 Q9UF83 564 aa9.08□□□□□ -0.96
HCFC1-202ENST00000369984 CRIP3Q6Q6R5 217 aa9.07□□□□□ -0.96
HCFC1-202ENST00000369984 TMEM254Q8TBM7 123 aa9.07□□□□□ -0.96
HCFC1-202ENST00000369984 LIMD2Q9BT23 127 aa9.07□□□□□ -0.96
HCFC1-202ENST00000369984 C1orf137Q5JT78 98 aa9.07□□□□□ -0.96
HCFC1-202ENST00000369984 POLR2KP53803 58 aaKnown RBP9.07□□□□□ -0.96
HCFC1-202ENST00000369984 Q8N3U1 123 aa9.07□□□□□ -0.96
HCFC1-202ENST00000369984 A0A087WYN8 130 aa9.06□□□□□ -0.96
HCFC1-202ENST00000369984 C4orf26Q17RF5 130 aa9.06□□□□□ -0.96
HCFC1-202ENST00000369984 ZNF702PQ9H963 129 aa9.06□□□□□ -0.96
HCFC1-202ENST00000369984 C7orf65Q6ZTY9 151 aa9.06□□□□□ -0.96
HCFC1-202ENST00000369984 C9orf116Q5BN46 136 aaPredicted RBP9.06□□□□□ -0.96
HCFC1-202ENST00000369984 LINC00337Q8N6G1 96 aa9.06□□□□□ -0.96
HCFC1-202ENST00000369984 SBSPONQ8IVN8 264 aa9.05□□□□□ -0.96
HCFC1-202ENST00000369984 C11orf21Q9P2W6 132 aa9.05□□□□□ -0.96
HCFC1-202ENST00000369984 COX6A2Q02221 97 aa9.05□□□□□ -0.96
HCFC1-202ENST00000369984 PIEZO1Q92508 2521 aa9.05□□□□□ -0.96
HCFC1-202ENST00000369984 A0A1B0GU69 56 aa9.04□□□□□ -0.96
HCFC1-202ENST00000369984 hDV103S1A0JD37 113 aa9.04□□□□□ -0.96
HCFC1-202ENST00000369984 PRR3P79522 188 aaKnown RBP9.04□□□□□ -0.96
HCFC1-202ENST00000369984 CNFNQ9BYD5 112 aa9.04□□□□□ -0.96
HCFC1-202ENST00000369984 IGIPA6NJ69 53 aa9.04□□□□□ -0.96
HCFC1-202ENST00000369984 CXCL6P80162 114 aa9.04□□□□□ -0.96
HCFC1-202ENST00000369984 Q8N6K4 173 aa9.04□□□□□ -0.96
HCFC1-202ENST00000369984 DEFB116Q30KQ4 102 aa9.03□□□□□ -0.96
HCFC1-202ENST00000369984 C11orf71Q6IPW1 123 aa9.03□□□□□ -0.96
HCFC1-202ENST00000369984 TRBV10-3A0A0K0K1G6 114 aa9.03□□□□□ -0.96
HCFC1-202ENST00000369984 MRGPRG-AS1Q2M3A8 158 aa9.03□□□□□ -0.96
HCFC1-202ENST00000369984 LINC00575Q6W349 94 aa9.02□□□□□ -0.97
HCFC1-202ENST00000369984 UNQ6190/PRO20217Q6UXQ8 127 aa9.02□□□□□ -0.97
HCFC1-202ENST00000369984 LY6G6DO95868 133 aa9.02□□□□□ -0.97
HCFC1-202ENST00000369984 TLN1Q9Y490 2541 aaKnown RBP9.01□□□□□ -0.97
HCFC1-202ENST00000369984 C8orf87E5RJ46 101 aa9.01□□□□□ -0.97
HCFC1-202ENST00000369984 ZNF462Q96JM2 2506 aa9.01□□□□□ -0.97
HCFC1-202ENST00000369984 IGLV5-52A0A0A0MRZ9 124 aa9.01□□□□□ -0.97
HCFC1-202ENST00000369984 PCSK5Q92824 1860 aa9□□□□□ -0.97
HCFC1-202ENST00000369984 ACYP2P14621 99 aa9□□□□□ -0.97
HCFC1-202ENST00000369984 LINC00242Q5T6M2 205 aa9□□□□□ -0.97
HCFC1-202ENST00000369984 MDFIQ99750 246 aa8.99□□□□□ -0.97
HCFC1-202ENST00000369984 SMIM1B2RUZ4 78 aa8.99□□□□□ -0.97
HCFC1-202ENST00000369984 IGLV1-40P01703 118 aa8.99□□□□□ -0.97
HCFC1-202ENST00000369984 IGLV8-61A0A075B6I0 122 aa8.99□□□□□ -0.97
HCFC1-202ENST00000369984 LINC01006Q8NI28 216 aa8.98□□□□□ -0.97
HCFC1-202ENST00000369984 OXLD1Q5BKU9 147 aa8.98□□□□□ -0.97
HCFC1-202ENST00000369984 C6orf223Q8N319 242 aa8.98□□□□□ -0.97
HCFC1-202ENST00000369984 Q9BRP9 147 aa8.98□□□□□ -0.97
HCFC1-202ENST00000369984 EGFEM1PQ0D2K5 195 aa8.97□□□□□ -0.97
HCFC1-202ENST00000369984 ADAMTSL4-AS1Q5T5F5 129 aa8.97□□□□□ -0.97
HCFC1-202ENST00000369984 IGKV2D-30A0A075B6S6 120 aa8.96□□□□□ -0.98
HCFC1-202ENST00000369984 IGKV2-30P06310 120 aa8.96□□□□□ -0.98
HCFC1-202ENST00000369984 HCG22E2RYF7 251 aa8.95□□□□□ -0.98
HCFC1-202ENST00000369984 TSPEAR-AS2P59090 65 aa8.95□□□□□ -0.98
HCFC1-202ENST00000369984 ATP11AUNQ6ZP68 121 aa8.95□□□□□ -0.98
HCFC1-202ENST00000369984 SSBP3-AS1Q7Z2R9 100 aa8.95□□□□□ -0.98
HCFC1-202ENST00000369984 C1orf64Q8NEQ6 169 aa8.95□□□□□ -0.98
HCFC1-202ENST00000369984 CHCHD7Q9BUK0 85 aa8.95□□□□□ -0.98
HCFC1-202ENST00000369984 C2orf48Q96LS8 159 aa8.95□□□□□ -0.98
HCFC1-202ENST00000369984 LINC01556Q5JQF7 62 aa8.94□□□□□ -0.98
HCFC1-202ENST00000369984 IGLV4-60A0A075B6I1 120 aa8.93□□□□□ -0.98
HCFC1-202ENST00000369984 EDN2P20800 178 aa8.93□□□□□ -0.98
HCFC1-202ENST00000369984 TP53AIP1Q9HCN2 124 aa8.92□□□□□ -0.98
HCFC1-202ENST00000369984 ANKRD17O75179 2603 aaKnown RBP8.91□□□□□ -0.98
HCFC1-202ENST00000369984 Q6ZTC4 211 aa8.91□□□□□ -0.98
HCFC1-202ENST00000369984 F8WDY8 70 aa8.91□□□□□ -0.98
HCFC1-202ENST00000369984 A8MTW9 85 aa8.9□□□□□ -0.98
HCFC1-202ENST00000369984 LINC00310P59036 64 aa8.9□□□□□ -0.98
HCFC1-202ENST00000369984 A0A087WSZ3 146 aa8.9□□□□□ -0.98
HCFC1-202ENST00000369984 URB1-AS1Q96HZ7 61 aa8.9□□□□□ -0.98
HCFC1-202ENST00000369984 AMELXQ99217 191 aa8.9□□□□□ -0.99
HCFC1-202ENST00000369984 ZNF580Q9UK33 172 aa8.89□□□□□ -0.99
HCFC1-202ENST00000369984 NAV2Q8IVL1 2488 aa8.89□□□□□ -0.99
HCFC1-202ENST00000369984 FHL2Q14192 279 aa8.88□□□□□ -0.99
HCFC1-202ENST00000369984 LINC00846Q9NV44 126 aa8.87□□□□□ -0.99
HCFC1-202ENST00000369984 C6orf48Q9UBA6 75 aa8.87□□□□□ -0.99
HCFC1-202ENST00000369984 ABCA12Q86UK0 2595 aa8.87□□□□□ -0.99
HCFC1-202ENST00000369984 PKD1L2Q7Z442 2459 aa8.86□□□□□ -0.99
HCFC1-202ENST00000369984 CENPFP49454 3210 aa8.86□□□□□ -0.99
HCFC1-202ENST00000369984 SMIM29Q86T20 159 aa8.86□□□□□ -0.99
HCFC1-202ENST00000369984 ODF3L2Q3SX64 289 aa8.85□□□□□ -0.99
HCFC1-202ENST00000369984 BRI3O95415 125 aa8.85□□□□□ -0.99
HCFC1-202ENST00000369984 C1orf134Q5TEV5 83 aa8.85□□□□□ -0.99
HCFC1-202ENST00000369984 SETD2Q9BYW2 2564 aaPredicted RBP8.85□□□□□ -0.99
HCFC1-202ENST00000369984 A0A1B0GUV1 79 aa8.85□□□□□ -0.99
HCFC1-202ENST00000369984 USP9XQ93008 2570 aaPredicted RBP8.84□□□□□ -0.99
HCFC1-202ENST00000369984 Q6ZSN1 163 aa8.83□□□□□ -1
HCFC1-202ENST00000369984 FAM229AH3BQW9 127 aa8.83□□□□□ -1
HCFC1-202ENST00000369984 CRIPTQ9P021 101 aa8.83□□□□□ -1
HCFC1-202ENST00000369984 NHLRC4P0CG21 123 aaPredicted RBP8.82□□□□□ -1
HCFC1-202ENST00000369984 IGF2RP11717 2491 aa8.82□□□□□ -1
HCFC1-202ENST00000369984 IGLV1-51P01701 117 aa8.82□□□□□ -1
HCFC1-202ENST00000369984 SMR3AQ99954 134 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms