RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 C2orf66Q6UXQ4 117 aa4.92□□□□□ -1.62
CSDE1-204ENST00000369530 I3L3M4 83 aa4.91□□□□□ -1.62
CSDE1-204ENST00000369530 PPP1R17O96001 155 aa4.91□□□□□ -1.62
CSDE1-204ENST00000369530 TMEM61Q8N0U2 210 aa4.91□□□□□ -1.62
CSDE1-204ENST00000369530 TRBV10-3A0A0K0K1G6 114 aa4.91□□□□□ -1.62
CSDE1-204ENST00000369530 USP17L23D6RBM5 183 aa4.91□□□□□ -1.62
CSDE1-204ENST00000369530 MED14OSP0DP75 135 aa4.91□□□□□ -1.62
CSDE1-204ENST00000369530 SUMO2P61956 95 aaKnown RBP4.91□□□□□ -1.62
CSDE1-204ENST00000369530 RHOHQ15669 191 aa4.91□□□□□ -1.62
CSDE1-204ENST00000369530 ATP5EP2Q5VTU8 51 aa4.91□□□□□ -1.62
CSDE1-204ENST00000369530 PKIGQ9Y2B9 76 aa4.91□□□□□ -1.62
CSDE1-204ENST00000369530 IGHV4OR15-8A0A075B7B6 117 aa4.91□□□□□ -1.62
CSDE1-204ENST00000369530 A0A087WW49 117 aa4.91□□□□□ -1.62
CSDE1-204ENST00000369530 ZNF561-AS1K7EIQ3 104 aa4.9□□□□□ -1.62
CSDE1-204ENST00000369530 MGPP08493 103 aa4.9□□□□□ -1.62
CSDE1-204ENST00000369530 SNRPD3P62318 126 aaKnown RBP4.9□□□□□ -1.62
CSDE1-204ENST00000369530 CSNK1G2-AS1Q8NCQ2 148 aa4.9□□□□□ -1.62
CSDE1-204ENST00000369530 LAMTOR3Q9UHA4 124 aa4.9□□□□□ -1.62
CSDE1-204ENST00000369530 F5H697 171 aa4.9□□□□□ -1.62
CSDE1-204ENST00000369530 COX7A2LO14548 114 aa4.9□□□□□ -1.62
CSDE1-204ENST00000369530 CD164Q04900 197 aa4.9□□□□□ -1.62
CSDE1-204ENST00000369530 MIAQ16674 131 aa4.9□□□□□ -1.62
CSDE1-204ENST00000369530 PHLDA3Q9Y5J5 127 aa4.9□□□□□ -1.62
CSDE1-204ENST00000369530 TENM2Q9NT68 2774 aa4.9□□□□□ -1.62
CSDE1-204ENST00000369530 NACAE9PAV3 2078 aa4.9□□□□□ -1.63
CSDE1-204ENST00000369530 IBA57-AS1B1ANH7 110 aa4.9□□□□□ -1.63
CSDE1-204ENST00000369530 TIRAPP58753 221 aa4.9□□□□□ -1.63
CSDE1-204ENST00000369530 DEFB104AQ8WTQ1 72 aa4.9□□□□□ -1.63
CSDE1-204ENST00000369530 TRBV7-6A0A0J9YX20 115 aa4.89□□□□□ -1.63
CSDE1-204ENST00000369530 A0A0U1RRA0 63 aa4.89□□□□□ -1.63
CSDE1-204ENST00000369530 LGALS3P17931 250 aaKnown RBP4.89□□□□□ -1.63
CSDE1-204ENST00000369530 HOXD3P31249 432 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-204ENST00000369530 SLURP1P55000 103 aa4.89□□□□□ -1.63
CSDE1-204ENST00000369530 TRAV12-3A0A0B4J271 114 aa4.89□□□□□ -1.63
CSDE1-204ENST00000369530 IGKV3D-20A0A0C4DH25 116 aa4.89□□□□□ -1.63
CSDE1-204ENST00000369530 NXPH4O95158 308 aa4.89□□□□□ -1.63
CSDE1-204ENST00000369530 IGHV3OR16-12A0A075B7B8 117 aa4.88□□□□□ -1.63
CSDE1-204ENST00000369530 FAM74A4Q5TZK3 123 aa4.88□□□□□ -1.63
CSDE1-204ENST00000369530 TRAV21A0A0B4J279 112 aa4.88□□□□□ -1.63
CSDE1-204ENST00000369530 KNCNA6PVL3 124 aa4.88□□□□□ -1.63
CSDE1-204ENST00000369530 K7EMT4 169 aa4.88□□□□□ -1.63
CSDE1-204ENST00000369530 DAZ2Q13117 558 aaKnown RBP4.88□□□□□ -1.63
CSDE1-204ENST00000369530 DAZ4Q86SG3 579 aaKnown RBP4.88□□□□□ -1.63
CSDE1-204ENST00000369530 CLEC2BQ92478 149 aa4.88□□□□□ -1.63
CSDE1-204ENST00000369530 DAZ3Q9NR90 486 aaKnown RBP4.88□□□□□ -1.63
CSDE1-204ENST00000369530 XCL1P47992 114 aa4.88□□□□□ -1.63
CSDE1-204ENST00000369530 MRPL53Q96EL3 112 aaKnown RBP4.88□□□□□ -1.63
CSDE1-204ENST00000369530 XCL2Q9UBD3 114 aa4.88□□□□□ -1.63
CSDE1-204ENST00000369530 SPINK13Q1W4C9 94 aa4.87□□□□□ -1.63
CSDE1-204ENST00000369530 NBEAL2Q6ZNJ1 2754 aa4.87□□□□□ -1.63
CSDE1-204ENST00000369530 CCL24O00175 119 aa4.87□□□□□ -1.63
CSDE1-204ENST00000369530 NDUFC1O43677 76 aa4.87□□□□□ -1.63
CSDE1-204ENST00000369530 POLR2KP53803 58 aaKnown RBP4.87□□□□□ -1.63
CSDE1-204ENST00000369530 DEFB131AP59861 70 aa4.87□□□□□ -1.63
CSDE1-204ENST00000369530 Q1RN00 199 aa4.87□□□□□ -1.63
CSDE1-204ENST00000369530 NSUN5P1Q3KNT7 163 aa4.87□□□□□ -1.63
CSDE1-204ENST00000369530 TMEM243Q9BU79 118 aa4.87□□□□□ -1.63
CSDE1-204ENST00000369530 KRTAP17-1Q9BYP8 105 aa4.87□□□□□ -1.63
CSDE1-204ENST00000369530 TRAV26-2A0A0B4J265 109 aa4.86□□□□□ -1.63
CSDE1-204ENST00000369530 TRBV6-5A0A0K0K1A5 114 aa4.86□□□□□ -1.63
CSDE1-204ENST00000369530 RBMY1BA6NDE4 496 aaKnown RBP4.86□□□□□ -1.63
CSDE1-204ENST00000369530 RBMY1EA6NEQ0 496 aaKnown RBP4.86□□□□□ -1.63
CSDE1-204ENST00000369530 GNRH2O43555 120 aa4.86□□□□□ -1.63
CSDE1-204ENST00000369530 RBMY1DP0C7P1 496 aaKnown RBP4.86□□□□□ -1.63
CSDE1-204ENST00000369530 PMAIP1Q13794 54 aa4.86□□□□□ -1.63
CSDE1-204ENST00000369530 C11orf21Q9P2W6 132 aa4.86□□□□□ -1.63
CSDE1-204ENST00000369530 TRAV7A0A075B6U4 112 aa4.85□□□□□ -1.63
CSDE1-204ENST00000369530 PLAC8L1A1L4L8 177 aa4.85□□□□□ -1.63
CSDE1-204ENST00000369530 DEFB114Q30KQ6 69 aa4.85□□□□□ -1.63
CSDE1-204ENST00000369530 LENEPQ9Y5L5 61 aa4.85□□□□□ -1.63
CSDE1-204ENST00000369530 KIF25-AS1Q9Y6Z4 181 aa4.85□□□□□ -1.63
CSDE1-204ENST00000369530 PRR9Q5T870 116 aa4.85□□□□□ -1.63
CSDE1-204ENST00000369530 C9orf47Q6ZRZ4 202 aa4.85□□□□□ -1.63
CSDE1-204ENST00000369530 IL17DQ8TAD2 202 aa4.85□□□□□ -1.63
CSDE1-204ENST00000369530 TRBV27A0A0K0K1C4 114 aa4.84□□□□□ -1.63
CSDE1-204ENST00000369530 CCKP06307 115 aa4.84□□□□□ -1.63
CSDE1-204ENST00000369530 PRSS2P07478 247 aa4.84□□□□□ -1.63
CSDE1-204ENST00000369530 RETNQ9HD89 108 aa4.84□□□□□ -1.63
CSDE1-204ENST00000369530 A0A087WWL8 130 aa4.84□□□□□ -1.63
CSDE1-204ENST00000369530 LINC00315P59091 139 aa4.84□□□□□ -1.63
CSDE1-204ENST00000369530 OVOL2Q9BRP0 275 aa4.84□□□□□ -1.63
CSDE1-204ENST00000369530 TRAV8-3A0A0A6YYJ7 113 aa4.84□□□□□ -1.64
CSDE1-204ENST00000369530 RBMY1A1P0DJD3 496 aaKnown RBP4.83□□□□□ -1.64
CSDE1-204ENST00000369530 RBMY1CP0DJD4 496 aa4.83□□□□□ -1.64
CSDE1-204ENST00000369530 RBMY1FQ15415 496 aaKnown RBP4.83□□□□□ -1.64
CSDE1-204ENST00000369530 ADAMTSL4-AS1Q5T5F5 129 aa4.83□□□□□ -1.64
CSDE1-204ENST00000369530 H7C2G1 150 aa4.83□□□□□ -1.64
CSDE1-204ENST00000369530 S100A7L2Q5SY68 101 aa4.83□□□□□ -1.64
CSDE1-204ENST00000369530 IGHV3-73A0A0B4J1V6 119 aa4.83□□□□□ -1.64
CSDE1-204ENST00000369530 BAALC-AS2P0C853 105 aa4.83□□□□□ -1.64
CSDE1-204ENST00000369530 TRAV13-2A0A0B4J235 113 aa4.82□□□□□ -1.64
CSDE1-204ENST00000369530 ZFAND2AQ8N6M9 145 aa4.82□□□□□ -1.64
CSDE1-204ENST00000369530 LINC00846Q9NV44 126 aa4.82□□□□□ -1.64
CSDE1-204ENST00000369530 MYCBP2O75592 4640 aa4.82□□□□□ -1.64
CSDE1-204ENST00000369530 ERC2-IT1O76042 136 aa4.82□□□□□ -1.64
CSDE1-204ENST00000369530 IGHV1-58A0A0C4DH39 117 aa4.82□□□□□ -1.64
CSDE1-204ENST00000369530 GHRHP01286 108 aa4.82□□□□□ -1.64
CSDE1-204ENST00000369530 IGHV3-30-3P0DP02 117 aa4.82□□□□□ -1.64
CSDE1-204ENST00000369530 C9orf66Q5T8R8 295 aa4.82□□□□□ -1.64
CSDE1-204ENST00000369530 RPL28P46779 137 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms