RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 Q8IZM0 81 aa8.96□□□□□ -0.98
TPM3-211ENST00000368531 PKD1P98161 4303 aa8.96□□□□□ -0.98
TPM3-211ENST00000368531 TMEM223A0PJW6 202 aa8.95□□□□□ -0.98
TPM3-211ENST00000368531 C5orf52A6NGY3 159 aa8.95□□□□□ -0.98
TPM3-211ENST00000368531 C4orf48Q5BLP8 95 aa8.95□□□□□ -0.98
TPM3-211ENST00000368531 FAM30AQ9NZY2 134 aa8.95□□□□□ -0.98
TPM3-211ENST00000368531 F8WDY8 70 aa8.94□□□□□ -0.98
TPM3-211ENST00000368531 HAMPP81172 84 aa8.94□□□□□ -0.98
TPM3-211ENST00000368531 LINC01545Q5VT33 79 aa8.94□□□□□ -0.98
TPM3-211ENST00000368531 SDIM1Q6ZPB5 146 aa8.94□□□□□ -0.98
TPM3-211ENST00000368531 C6orf48Q9UBA6 75 aa8.94□□□□□ -0.98
TPM3-211ENST00000368531 IGLV5-39A0A0G2JS06 123 aa8.93□□□□□ -0.98
TPM3-211ENST00000368531 IGKV2-24A0A0C4DH68 120 aa8.92□□□□□ -0.98
TPM3-211ENST00000368531 CHTF8P0CG12 524 aa8.92□□□□□ -0.98
TPM3-211ENST00000368531 C9orf116Q5BN46 136 aaPredicted RBP8.92□□□□□ -0.98
TPM3-211ENST00000368531 DPH3Q96FX2 82 aa8.92□□□□□ -0.98
TPM3-211ENST00000368531 DNAH11Q96DT5 4516 aa8.91□□□□□ -0.98
TPM3-211ENST00000368531 C20orf202A1L168 122 aa8.91□□□□□ -0.98
TPM3-211ENST00000368531 CXCL5P42830 114 aa8.91□□□□□ -0.98
TPM3-211ENST00000368531 RPL18AQ02543 176 aaKnown RBP8.91□□□□□ -0.98
TPM3-211ENST00000368531 GAGE2BQ13066 116 aa8.91□□□□□ -0.98
TPM3-211ENST00000368531 A0A096LNI7 61 aa8.9□□□□□ -0.98
TPM3-211ENST00000368531 TRBV30A0A0K0K1B3 111 aa8.9□□□□□ -0.98
TPM3-211ENST00000368531 LOC107984640A0A0U1RRK4 108 aa8.9□□□□□ -0.98
TPM3-211ENST00000368531 HERVK_113P61574 105 aa8.9□□□□□ -0.98
TPM3-211ENST00000368531 RNF151Q2KHN1 245 aa8.9□□□□□ -0.98
TPM3-211ENST00000368531 ATOH7Q8N100 152 aa8.9□□□□□ -0.98
TPM3-211ENST00000368531 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.9□□□□□ -0.98
TPM3-211ENST00000368531 PANO1I0J062 215 aa8.89□□□□□ -0.99
TPM3-211ENST00000368531 LORP23490 312 aaPredicted RBP8.89□□□□□ -0.99
TPM3-211ENST00000368531 LINC00528Q8N1L1 170 aa8.89□□□□□ -0.99
TPM3-211ENST00000368531 STPG4Q8N801 248 aa8.89□□□□□ -0.99
TPM3-211ENST00000368531 ZNF625Q96I27 306 aaPredicted RBP8.89□□□□□ -0.99
TPM3-211ENST00000368531 LEPROTO15243 131 aa8.88□□□□□ -0.99
TPM3-211ENST00000368531 MAJINQ3KP22 176 aa8.88□□□□□ -0.99
TPM3-211ENST00000368531 GAGE2EQ4V326 116 aa8.88□□□□□ -0.99
TPM3-211ENST00000368531 GAGE2DQ9UEU5 116 aa8.88□□□□□ -0.99
TPM3-211ENST00000368531 XGP55808 180 aa8.87□□□□□ -0.99
TPM3-211ENST00000368531 Q6ZSA8 131 aa8.87□□□□□ -0.99
TPM3-211ENST00000368531 PLEKHB2Q96CS7 222 aa8.87□□□□□ -0.99
TPM3-211ENST00000368531 PKIGQ9Y2B9 76 aa8.87□□□□□ -0.99
TPM3-211ENST00000368531 PTTG1IPP53801 180 aa8.86□□□□□ -0.99
TPM3-211ENST00000368531 TSPEAR-AS2P59090 65 aa8.86□□□□□ -0.99
TPM3-211ENST00000368531 HECTD4Q9Y4D8 3996 aa8.86□□□□□ -0.99
TPM3-211ENST00000368531 J3QQQ9 107 aa8.85□□□□□ -0.99
TPM3-211ENST00000368531 CDK2AP2O75956 126 aa8.85□□□□□ -0.99
TPM3-211ENST00000368531 SCGB1D1O95968 90 aa8.85□□□□□ -0.99
TPM3-211ENST00000368531 LGALS3P17931 250 aaKnown RBP8.85□□□□□ -0.99
TPM3-211ENST00000368531 PFN2P35080 140 aa8.85□□□□□ -0.99
TPM3-211ENST00000368531 Q6ZRP5 223 aa8.85□□□□□ -0.99
TPM3-211ENST00000368531 SCXQ7RTU7 201 aa8.85□□□□□ -0.99
TPM3-211ENST00000368531 NDUFA12Q9UI09 145 aa8.85□□□□□ -0.99
TPM3-211ENST00000368531 EPPK1P58107 5090 aaKnown RBP8.84□□□□□ -0.99
TPM3-211ENST00000368531 A0A087WYN8 130 aa8.84□□□□□ -0.99
TPM3-211ENST00000368531 E9PLD3 99 aa8.84□□□□□ -0.99
TPM3-211ENST00000368531 NDUFC2-KCTD14E9PQ53 114 aa8.84□□□□□ -0.99
TPM3-211ENST00000368531 TLX1NBP0CAT3 122 aa8.84□□□□□ -0.99
TPM3-211ENST00000368531 CIRBP-AS1Q8TBR5 109 aa8.84□□□□□ -0.99
TPM3-211ENST00000368531 SPACA4Q8TDM5 124 aa8.84□□□□□ -0.99
TPM3-211ENST00000368531 A0A0U1RRA0 63 aa8.83□□□□□ -1
TPM3-211ENST00000368531 ERG28Q9UKR5 140 aa8.83□□□□□ -1
TPM3-211ENST00000368531 PKHD1P08F94 4074 aa8.82□□□□□ -1
TPM3-211ENST00000368531 MYMXA0A1B0GTQ4 84 aa8.82□□□□□ -1
TPM3-211ENST00000368531 SMR3BP02814 79 aaPredicted RBP8.82□□□□□ -1
TPM3-211ENST00000368531 CIRBPQ14011 172 aaKnown RBP8.82□□□□□ -1
TPM3-211ENST00000368531 SFTA2Q6UW10 78 aa8.82□□□□□ -1
TPM3-211ENST00000368531 XAGE1AQ9HD64 81 aa8.82□□□□□ -1
TPM3-211ENST00000368531 LINC00474Q9P2X8 69 aa8.82□□□□□ -1
TPM3-211ENST00000368531 IGKV2D-26A0A0A0MRZ7 120 aa8.81□□□□□ -1
TPM3-211ENST00000368531 AKR1D1P51857 326 aa8.81□□□□□ -1
TPM3-211ENST00000368531 LINC00158P58513 81 aa8.81□□□□□ -1
TPM3-211ENST00000368531 ANKRD39Q53RE8 183 aa8.81□□□□□ -1
TPM3-211ENST00000368531 MEIG1Q5JSS6 88 aa8.81□□□□□ -1
TPM3-211ENST00000368531 DNAH5Q8TE73 4624 aa8.8□□□□□ -1
TPM3-211ENST00000368531 HERV-K104P63124 156 aa8.8□□□□□ -1
TPM3-211ENST00000368531 DYNC1H1Q14204 4646 aaKnown RBP8.8□□□□□ -1
TPM3-211ENST00000368531 A0A1W2PNN7 141 aa8.79□□□□□ -1
TPM3-211ENST00000368531 FAM168BA1KXE4 195 aa8.79□□□□□ -1
TPM3-211ENST00000368531 SMIM13P0DJ93 91 aa8.79□□□□□ -1
TPM3-211ENST00000368531 NMUP48645 174 aa8.79□□□□□ -1
TPM3-211ENST00000368531 C9orf129Q5T035 196 aaKnown RBP8.79□□□□□ -1
TPM3-211ENST00000368531 TTTY13Q9BZ97 58 aa8.79□□□□□ -1
TPM3-211ENST00000368531 HSBP1L1C9JCN9 74 aa8.78□□□□□ -1
TPM3-211ENST00000368531 FAM19A5Q7Z5A7 132 aaPredicted RBP8.78□□□□□ -1
TPM3-211ENST00000368531 PLAC8Q9NZF1 115 aa8.78□□□□□ -1
TPM3-211ENST00000368531 ZNF815PA8K554 130 aa8.77□□□□□ -1.01
TPM3-211ENST00000368531 COX17Q14061 63 aa8.77□□□□□ -1.01
TPM3-211ENST00000368531 SND1-IT1Q9HBX3 110 aa8.76□□□□□ -1.01
TPM3-211ENST00000368531 A0A0J9YXY3 114 aa8.75□□□□□ -1.01
TPM3-211ENST00000368531 JOSD1Q15040 202 aaPredicted RBP8.75□□□□□ -1.01
TPM3-211ENST00000368531 KRTAP17-1Q9BYP8 105 aa8.75□□□□□ -1.01
TPM3-211ENST00000368531 LRP1BQ9NZR2 4599 aa8.75□□□□□ -1.01
TPM3-211ENST00000368531 LINC00587B1AMM8 73 aa8.74□□□□□ -1.01
TPM3-211ENST00000368531 SERTAD4-AS1Q5TG53 156 aa8.74□□□□□ -1.01
TPM3-211ENST00000368531 PHF5AQ7RTV0 110 aaKnown RBP8.74□□□□□ -1.01
TPM3-211ENST00000368531 PCP2Q8IVA1 136 aa8.74□□□□□ -1.01
TPM3-211ENST00000368531 MIR7-3HGQ8N6C7 128 aa8.74□□□□□ -1.01
TPM3-211ENST00000368531 DAND5Q8N907 189 aa8.74□□□□□ -1.01
TPM3-211ENST00000368531 KRTAP7-1Q8IUC3 87 aa8.73□□□□□ -1.01
TPM3-211ENST00000368531 M0QXV9 152 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms