RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 HIST1H2BNQ99877 126 aa9.96□□□□□ -0.82
PRKN-203ENST00000366894 HIST1H2BMQ99879 126 aa9.96□□□□□ -0.82
PRKN-203ENST00000366894 CHAC1Q9BUX1 264 aa9.96□□□□□ -0.82
PRKN-203ENST00000366894 CHTOPQ9Y3Y2 248 aaKnown RBP9.96□□□□□ -0.82
PRKN-203ENST00000366894 TRBV30A0A0K0K1B3 111 aa9.95□□□□□ -0.82
PRKN-203ENST00000366894 SFTA2Q6UW10 78 aa9.95□□□□□ -0.82
PRKN-203ENST00000366894 MAP1LC3CQ9BXW4 147 aa9.95□□□□□ -0.82
PRKN-203ENST00000366894 FLG2Q5D862 2391 aaPredicted RBP9.94□□□□□ -0.82
PRKN-203ENST00000366894 FAM229AH3BQW9 127 aa9.94□□□□□ -0.82
PRKN-203ENST00000366894 TOMM7Q9P0U1 55 aa9.94□□□□□ -0.82
PRKN-203ENST00000366894 F8VRH5 84 aa9.93□□□□□ -0.82
PRKN-203ENST00000366894 TMEM170BQ5T4T1 132 aa9.92□□□□□ -0.82
PRKN-203ENST00000366894 Q6ZRU5 148 aa9.92□□□□□ -0.82
PRKN-203ENST00000366894 LINC00526Q96FQ7 95 aa9.92□□□□□ -0.82
PRKN-203ENST00000366894 SRRM2Q9UQ35 2752 aaKnown RBP9.92□□□□□ -0.82
PRKN-203ENST00000366894 FABP4P15090 132 aa9.91□□□□□ -0.82
PRKN-203ENST00000366894 PLNP26678 52 aa9.91□□□□□ -0.82
PRKN-203ENST00000366894 COX7B2Q8TF08 81 aa9.91□□□□□ -0.82
PRKN-203ENST00000366894 SMR3BP02814 79 aaPredicted RBP9.9□□□□□ -0.82
PRKN-203ENST00000366894 AKR1D1P51857 326 aa9.9□□□□□ -0.82
PRKN-203ENST00000366894 KIAA0087Q14695 138 aa9.9□□□□□ -0.82
PRKN-203ENST00000366894 COA6Q5JTJ3 125 aaKnown RBP9.9□□□□□ -0.82
PRKN-203ENST00000366894 SMIM1B2RUZ4 78 aa9.89□□□□□ -0.83
PRKN-203ENST00000366894 TLX1NBP0CAT3 122 aa9.89□□□□□ -0.83
PRKN-203ENST00000366894 CIRBPQ14011 172 aaKnown RBP9.89□□□□□ -0.83
PRKN-203ENST00000366894 UNQ6190/PRO20217Q6UXQ8 127 aa9.89□□□□□ -0.83
PRKN-203ENST00000366894 H0Y8G0 127 aa9.88□□□□□ -0.83
PRKN-203ENST00000366894 S100A6P06703 90 aa9.88□□□□□ -0.83
PRKN-203ENST00000366894 MAJINQ3KP22 176 aa9.88□□□□□ -0.83
PRKN-203ENST00000366894 IGKV2-24A0A0C4DH68 120 aa9.87□□□□□ -0.83
PRKN-203ENST00000366894 NUPR1O60356 82 aa9.87□□□□□ -0.83
PRKN-203ENST00000366894 PLA2G1BP04054 148 aaKnown RBP9.87□□□□□ -0.83
PRKN-203ENST00000366894 SPINK8P0C7L1 97 aa9.87□□□□□ -0.83
PRKN-203ENST00000366894 ZNF22P17026 224 aaPredicted RBP9.87□□□□□ -0.83
PRKN-203ENST00000366894 PTTG1IPP53801 180 aa9.87□□□□□ -0.83
PRKN-203ENST00000366894 RPL18AQ02543 176 aaKnown RBP9.87□□□□□ -0.83
PRKN-203ENST00000366894 GAGE2BQ13066 116 aa9.87□□□□□ -0.83
PRKN-203ENST00000366894 SCXQ7RTU7 201 aa9.87□□□□□ -0.83
PRKN-203ENST00000366894 CIRBP-AS1Q8TBR5 109 aa9.87□□□□□ -0.83
PRKN-203ENST00000366894 SPACA4Q8TDM5 124 aa9.87□□□□□ -0.83
PRKN-203ENST00000366894 C11orf86A6NJI1 115 aa9.86□□□□□ -0.83
PRKN-203ENST00000366894 LINC00587B1AMM8 73 aa9.86□□□□□ -0.83
PRKN-203ENST00000366894 NDUFC2-KCTD14E9PQ53 114 aa9.86□□□□□ -0.83
PRKN-203ENST00000366894 LINC00310P59036 64 aa9.86□□□□□ -0.83
PRKN-203ENST00000366894 HERVK_113P61574 105 aa9.86□□□□□ -0.83
PRKN-203ENST00000366894 IGLV5-39A0A0G2JS06 123 aa9.85□□□□□ -0.83
PRKN-203ENST00000366894 DPM2O94777 84 aa9.85□□□□□ -0.83
PRKN-203ENST00000366894 STPG4Q8N801 248 aa9.85□□□□□ -0.83
PRKN-203ENST00000366894 C7orf33Q8WU49 177 aa9.85□□□□□ -0.83
PRKN-203ENST00000366894 ODF1Q14990 250 aa9.84□□□□□ -0.83
PRKN-203ENST00000366894 PET117Q6UWS5 81 aa9.84□□□□□ -0.83
PRKN-203ENST00000366894 C2orf82Q6UX34 121 aa9.84□□□□□ -0.83
PRKN-203ENST00000366894 PLAC8Q9NZF1 115 aa9.84□□□□□ -0.83
PRKN-203ENST00000366894 C6orf48Q9UBA6 75 aa9.84□□□□□ -0.83
PRKN-203ENST00000366894 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.84□□□□□ -0.83
PRKN-203ENST00000366894 A0A087WYN8 130 aa9.83□□□□□ -0.84
PRKN-203ENST00000366894 A0A096LNI7 61 aa9.83□□□□□ -0.84
PRKN-203ENST00000366894 C20orf202A1L168 122 aa9.83□□□□□ -0.84
PRKN-203ENST00000366894 A6NJY4 79 aa9.83□□□□□ -0.84
PRKN-203ENST00000366894 IGKCP01834 107 aa9.83□□□□□ -0.84
PRKN-203ENST00000366894 S100A2P29034 98 aa9.83□□□□□ -0.84
PRKN-203ENST00000366894 COX17Q14061 63 aa9.83□□□□□ -0.84
PRKN-203ENST00000366894 TMEM223A0PJW6 202 aa9.82□□□□□ -0.84
PRKN-203ENST00000366894 SYS1-DBNDD2H3BUS1 97 aa9.82□□□□□ -0.84
PRKN-203ENST00000366894 C10orf25Q5T742 122 aa9.82□□□□□ -0.84
PRKN-203ENST00000366894 PANO1I0J062 215 aa9.81□□□□□ -0.84
PRKN-203ENST00000366894 PLEKHB2Q96CS7 222 aa9.81□□□□□ -0.84
PRKN-203ENST00000366894 CHTF8P0CG12 524 aa9.8□□□□□ -0.84
PRKN-203ENST00000366894 HERV-K104P63124 156 aa9.8□□□□□ -0.84
PRKN-203ENST00000366894 GAGE2EQ4V326 116 aa9.8□□□□□ -0.84
PRKN-203ENST00000366894 GAGE2DQ9UEU5 116 aa9.8□□□□□ -0.84
PRKN-203ENST00000366894 Q6ZRP5 223 aa9.79□□□□□ -0.84
PRKN-203ENST00000366894 LINC00528Q8N1L1 170 aa9.79□□□□□ -0.84
PRKN-203ENST00000366894 MYMXA0A1B0GTQ4 84 aa9.78□□□□□ -0.84
PRKN-203ENST00000366894 NMUP48645 174 aa9.77□□□□□ -0.85
PRKN-203ENST00000366894 LEPROTO15243 131 aa9.76□□□□□ -0.85
PRKN-203ENST00000366894 KRTDAPP60985 99 aa9.76□□□□□ -0.85
PRKN-203ENST00000366894 C9orf116Q5BN46 136 aaPredicted RBP9.76□□□□□ -0.85
PRKN-203ENST00000366894 LINC01545Q5VT33 79 aa9.76□□□□□ -0.85
PRKN-203ENST00000366894 LGALS3P17931 250 aaKnown RBP9.75□□□□□ -0.85
PRKN-203ENST00000366894 KRTAP10-4P60372 401 aaPredicted RBP9.75□□□□□ -0.85
PRKN-203ENST00000366894 ERG28Q9UKR5 140 aa9.75□□□□□ -0.85
PRKN-203ENST00000366894 C3orf79P0CE67 100 aa9.74□□□□□ -0.85
PRKN-203ENST00000366894 RPL37AP61513 92 aaKnown RBP9.74□□□□□ -0.85
PRKN-203ENST00000366894 LBHQ53QV2 105 aaPredicted RBP9.74□□□□□ -0.85
PRKN-203ENST00000366894 KRTAP29-1A8MX34 341 aaPredicted RBP9.73□□□□□ -0.85
PRKN-203ENST00000366894 PFN2P35080 140 aa9.73□□□□□ -0.85
PRKN-203ENST00000366894 SNRPEP62304 92 aaKnown RBP9.73□□□□□ -0.85
PRKN-203ENST00000366894 NDUFA12Q9UI09 145 aa9.73□□□□□ -0.85
PRKN-203ENST00000366894 J3QQQ9 107 aa9.72□□□□□ -0.85
PRKN-203ENST00000366894 LINC00158P58513 81 aa9.72□□□□□ -0.85
PRKN-203ENST00000366894 RPL24P83731 157 aaKnown RBP9.72□□□□□ -0.85
PRKN-203ENST00000366894 MEIG1Q5JSS6 88 aa9.72□□□□□ -0.85
PRKN-203ENST00000366894 SERTAD4-AS1Q5TG53 156 aa9.72□□□□□ -0.85
PRKN-203ENST00000366894 ZNF625Q96I27 306 aaPredicted RBP9.72□□□□□ -0.85
PRKN-203ENST00000366894 E9PLD3 99 aa9.71□□□□□ -0.86
PRKN-203ENST00000366894 HIST3H2BBQ8N257 126 aa9.71□□□□□ -0.86
PRKN-203ENST00000366894 PMCHL2Q9BQD1 86 aa9.71□□□□□ -0.86
PRKN-203ENST00000366894 PLA2G2DQ9UNK4 145 aa9.71□□□□□ -0.86
PRKN-203ENST00000366894 PKHD1L1Q86WI1 4243 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms