RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 ATRQ13535 2644 aa8.14□□□□□ -1.11
CDC42BPA-205ENST00000366769 PROK1P58294 105 aa8.14□□□□□ -1.11
CDC42BPA-205ENST00000366769 RPL28P46779 137 aaKnown RBP8.13□□□□□ -1.11
CDC42BPA-205ENST00000366769 LINC01547P58512 204 aaPredicted RBP8.13□□□□□ -1.11
CDC42BPA-205ENST00000366769 DHRS4-AS1Q9P1J3 65 aa8.13□□□□□ -1.11
CDC42BPA-205ENST00000366769 FHL2Q14192 279 aa8.12□□□□□ -1.11
CDC42BPA-205ENST00000366769 PCOTHQ58A44 107 aa8.12□□□□□ -1.11
CDC42BPA-205ENST00000366769 MAP1AP78559 2803 aaPredicted RBP8.12□□□□□ -1.11
CDC42BPA-205ENST00000366769 Q8N814 137 aa8.12□□□□□ -1.11
CDC42BPA-205ENST00000366769 MAST4O15021 2626 aa8.12□□□□□ -1.11
CDC42BPA-205ENST00000366769 C10orf25Q5T742 122 aa8.12□□□□□ -1.11
CDC42BPA-205ENST00000366769 IGHV6-1A0A0B4J1U7 121 aa8.12□□□□□ -1.11
CDC42BPA-205ENST00000366769 BRI3O95415 125 aa8.11□□□□□ -1.11
CDC42BPA-205ENST00000366769 LINC00208Q96KT6 92 aa8.11□□□□□ -1.11
CDC42BPA-205ENST00000366769 MUC22E2RYF6 1773 aaPredicted RBP8.11□□□□□ -1.11
CDC42BPA-205ENST00000366769 C2orf48Q96LS8 159 aa8.11□□□□□ -1.11
CDC42BPA-205ENST00000366769 IBA57-AS1B1ANH7 110 aa8.1□□□□□ -1.11
CDC42BPA-205ENST00000366769 PRR3P79522 188 aaKnown RBP8.1□□□□□ -1.11
CDC42BPA-205ENST00000366769 Q8N7P7 452 aa8.1□□□□□ -1.11
CDC42BPA-205ENST00000366769 KPRPQ5T749 579 aaPredicted RBP8.1□□□□□ -1.11
CDC42BPA-205ENST00000366769 NTM-AS1Q6ZSK4 140 aa8.1□□□□□ -1.11
CDC42BPA-205ENST00000366769 Q6ZSR3 168 aa8.1□□□□□ -1.11
CDC42BPA-205ENST00000366769 LINC00474Q9P2X8 69 aa8.1□□□□□ -1.11
CDC42BPA-205ENST00000366769 INAFM1C9JVW0 142 aa8.1□□□□□ -1.11
CDC42BPA-205ENST00000366769 DAZAP2Q15038 168 aaPredicted RBP8.09□□□□□ -1.11
CDC42BPA-205ENST00000366769 TRAV10A0A0B4J240 114 aa8.08□□□□□ -1.12
CDC42BPA-205ENST00000366769 TRBV6-8A0A0A6YYG3 113 aa8.08□□□□□ -1.12
CDC42BPA-205ENST00000366769 BBC3Q96PG8 261 aaPredicted RBP8.08□□□□□ -1.12
CDC42BPA-205ENST00000366769 COL4A4P53420 1690 aaPredicted RBP8.08□□□□□ -1.12
CDC42BPA-205ENST00000366769 H3BS24 57 aa8.08□□□□□ -1.12
CDC42BPA-205ENST00000366769 U3KQA8 63 aa8.08□□□□□ -1.12
CDC42BPA-205ENST00000366769 SBSPONQ8IVN8 264 aa8.08□□□□□ -1.12
CDC42BPA-205ENST00000366769 LTBP2Q14767 1821 aa8.08□□□□□ -1.12
CDC42BPA-205ENST00000366769 M0R378 163 aa8.07□□□□□ -1.12
CDC42BPA-205ENST00000366769 IGIPA6NJ69 53 aa8.07□□□□□ -1.12
CDC42BPA-205ENST00000366769 OXLD1Q5BKU9 147 aa8.07□□□□□ -1.12
CDC42BPA-205ENST00000366769 PRLHP81277 87 aa8.07□□□□□ -1.12
CDC42BPA-205ENST00000366769 NUPR2A6NF83 97 aa8.05□□□□□ -1.12
CDC42BPA-205ENST00000366769 ADORA2A-AS1P86434 159 aa8.05□□□□□ -1.12
CDC42BPA-205ENST00000366769 C9orf116Q5BN46 136 aaPredicted RBP8.05□□□□□ -1.12
CDC42BPA-205ENST00000366769 CD164Q04900 197 aa8.05□□□□□ -1.12
CDC42BPA-205ENST00000366769 PRM2P04554 102 aa8.05□□□□□ -1.12
CDC42BPA-205ENST00000366769 HCG22E2RYF7 251 aa8.05□□□□□ -1.12
CDC42BPA-205ENST00000366769 DEFB114Q30KQ6 69 aa8.04□□□□□ -1.12
CDC42BPA-205ENST00000366769 RNASE3P12724 160 aaKnown RBP8.03□□□□□ -1.12
CDC42BPA-205ENST00000366769 FAM218AQ96MZ4 157 aa8.03□□□□□ -1.12
CDC42BPA-205ENST00000366769 IGKV2D-30A0A075B6S6 120 aa8.03□□□□□ -1.12
CDC42BPA-205ENST00000366769 IGKV2-30P06310 120 aa8.03□□□□□ -1.12
CDC42BPA-205ENST00000366769 CNFNQ9BYD5 112 aa8.03□□□□□ -1.12
CDC42BPA-205ENST00000366769 COX6A2Q02221 97 aa8.03□□□□□ -1.12
CDC42BPA-205ENST00000366769 CHD6Q8TD26 2715 aa8.02□□□□□ -1.12
CDC42BPA-205ENST00000366769 LINC01556Q5JQF7 62 aa8.02□□□□□ -1.13
CDC42BPA-205ENST00000366769 PIP4P1Q86T03 277 aa8.02□□□□□ -1.13
CDC42BPA-205ENST00000366769 MGAM2Q2M2H8 2515 aa8.02□□□□□ -1.13
CDC42BPA-205ENST00000366769 A8MTW9 85 aa8.02□□□□□ -1.13
CDC42BPA-205ENST00000366769 SPAG11AQ6PDA7 123 aa8.02□□□□□ -1.13
CDC42BPA-205ENST00000366769 CD164L2Q6UWJ8 174 aa8.02□□□□□ -1.13
CDC42BPA-205ENST00000366769 CXCL6P80162 114 aa8.02□□□□□ -1.13
CDC42BPA-205ENST00000366769 LIMD2Q9BT23 127 aa8.01□□□□□ -1.13
CDC42BPA-205ENST00000366769 DEFB116Q30KQ4 102 aa8.01□□□□□ -1.13
CDC42BPA-205ENST00000366769 LINC00337Q8N6G1 96 aa8.01□□□□□ -1.13
CDC42BPA-205ENST00000366769 IGLV5-52A0A0A0MRZ9 124 aa8.01□□□□□ -1.13
CDC42BPA-205ENST00000366769 H0Y9P7 68 aa8□□□□□ -1.13
CDC42BPA-205ENST00000366769 C1orf137Q5JT78 98 aa7.99□□□□□ -1.13
CDC42BPA-205ENST00000366769 TM2D3Q9BRN9 247 aa7.99□□□□□ -1.13
CDC42BPA-205ENST00000366769 FSHBP01225 129 aa7.99□□□□□ -1.13
CDC42BPA-205ENST00000366769 NBEAL1Q6ZS30 2694 aa7.99□□□□□ -1.13
CDC42BPA-205ENST00000366769 SMIM29Q86T20 159 aa7.99□□□□□ -1.13
CDC42BPA-205ENST00000366769 CENPFP49454 3210 aa7.99□□□□□ -1.13
CDC42BPA-205ENST00000366769 UNC79Q9P2D8 2635 aa7.98□□□□□ -1.13
CDC42BPA-205ENST00000366769 TNFRSF13BO14836 293 aaPredicted RBP7.98□□□□□ -1.13
CDC42BPA-205ENST00000366769 PLA2G2CQ5R387 149 aa7.98□□□□□ -1.13
CDC42BPA-205ENST00000366769 SPINT4Q6UDR6 99 aa7.98□□□□□ -1.13
CDC42BPA-205ENST00000366769 LELP1Q5T871 98 aa7.98□□□□□ -1.13
CDC42BPA-205ENST00000366769 K7EQG2 157 aa7.98□□□□□ -1.13
CDC42BPA-205ENST00000366769 POLR2KP53803 58 aaKnown RBP7.98□□□□□ -1.13
CDC42BPA-205ENST00000366769 TRBV6-4A0A1B0GX49 114 aa7.98□□□□□ -1.13
CDC42BPA-205ENST00000366769 HELZ2Q9BYK8 2649 aaKnown RBP7.98□□□□□ -1.13
CDC42BPA-205ENST00000366769 C7orf65Q6ZTY9 151 aa7.97□□□□□ -1.13
CDC42BPA-205ENST00000366769 CDSNQ15517 529 aa7.97□□□□□ -1.13
CDC42BPA-205ENST00000366769 STAB1Q9NY15 2570 aa7.97□□□□□ -1.13
CDC42BPA-205ENST00000366769 LINC01546A6NGU7 62 aa7.97□□□□□ -1.13
CDC42BPA-205ENST00000366769 MSMPQ1L6U9 139 aa7.97□□□□□ -1.13
CDC42BPA-205ENST00000366769 TRBV10-3A0A0K0K1G6 114 aa7.97□□□□□ -1.13
CDC42BPA-205ENST00000366769 REG3GQ6UW15 175 aa7.97□□□□□ -1.13
CDC42BPA-205ENST00000366769 WIPF1O43516 503 aa7.96□□□□□ -1.13
CDC42BPA-205ENST00000366769 LINC00959A0A1B0GUT2 108 aa7.96□□□□□ -1.13
CDC42BPA-205ENST00000366769 C10orf99Q6UWK7 81 aa7.96□□□□□ -1.14
CDC42BPA-205ENST00000366769 IGLV8-61A0A075B6I0 122 aa7.96□□□□□ -1.14
CDC42BPA-205ENST00000366769 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.95□□□□□ -1.14
CDC42BPA-205ENST00000366769 KTN1-AS1Q86SY8 53 aa7.95□□□□□ -1.14
CDC42BPA-205ENST00000366769 COL6A5A8TX70 2615 aa7.95□□□□□ -1.14
CDC42BPA-205ENST00000366769 Q9BRP9 147 aa7.95□□□□□ -1.14
CDC42BPA-205ENST00000366769 LINC00242Q5T6M2 205 aa7.95□□□□□ -1.14
CDC42BPA-205ENST00000366769 Q8N2B8 174 aa7.95□□□□□ -1.14
CDC42BPA-205ENST00000366769 Q6YL49 198 aa7.94□□□□□ -1.14
CDC42BPA-205ENST00000366769 CYSRT1A8MQ03 144 aa7.94□□□□□ -1.14
CDC42BPA-205ENST00000366769 IGLV1-47P01700 117 aa7.94□□□□□ -1.14
CDC42BPA-205ENST00000366769 SMIM1B2RUZ4 78 aa7.94□□□□□ -1.14
CDC42BPA-205ENST00000366769 LY6G6DO95868 133 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms