RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 ENHOQ6UWT2 76 aa9.53□□□□□ -0.88
LDB3-202ENST00000361373 KLK9Q2XQG4 91 aa9.53□□□□□ -0.88
LDB3-202ENST00000361373 FAM19A4Q96LR4 140 aa9.53□□□□□ -0.88
LDB3-202ENST00000361373 REG3GQ6UW15 175 aa9.52□□□□□ -0.89
LDB3-202ENST00000361373 TRBV10-3A0A0K0K1G6 114 aa9.52□□□□□ -0.89
LDB3-202ENST00000361373 CASC2Q6XLA1 102 aa9.52□□□□□ -0.89
LDB3-202ENST00000361373 H3BNG1 76 aa9.51□□□□□ -0.89
LDB3-202ENST00000361373 C3orf84H3BNL1 204 aa9.51□□□□□ -0.89
LDB3-202ENST00000361373 UQCRQO14949 82 aa9.51□□□□□ -0.89
LDB3-202ENST00000361373 WFDC10BQ8IUB3 73 aa9.51□□□□□ -0.89
LDB3-202ENST00000361373 J3KT08 172 aa9.51□□□□□ -0.89
LDB3-202ENST00000361373 C10orf25Q5T742 122 aa9.51□□□□□ -0.89
LDB3-202ENST00000361373 A0A096LNJ9 63 aa9.51□□□□□ -0.89
LDB3-202ENST00000361373 POLQO75417 2590 aa9.51□□□□□ -0.89
LDB3-202ENST00000361373 C5orf47Q569G3 176 aa9.5□□□□□ -0.89
LDB3-202ENST00000361373 ANKRD17O75179 2603 aaKnown RBP9.5□□□□□ -0.89
LDB3-202ENST00000361373 NTM-AS1Q6ZSK4 140 aa9.5□□□□□ -0.89
LDB3-202ENST00000361373 SCXQ7RTU7 201 aa9.5□□□□□ -0.89
LDB3-202ENST00000361373 C9orf116Q5BN46 136 aaPredicted RBP9.49□□□□□ -0.89
LDB3-202ENST00000361373 Q6JHZ5 121 aa9.49□□□□□ -0.89
LDB3-202ENST00000361373 Q8N814 137 aa9.48□□□□□ -0.89
LDB3-202ENST00000361373 PRYO14603 147 aa9.48□□□□□ -0.89
LDB3-202ENST00000361373 LINC01556Q5JQF7 62 aa9.48□□□□□ -0.89
LDB3-202ENST00000361373 C20orf197Q8N268 126 aa9.48□□□□□ -0.89
LDB3-202ENST00000361373 ACANP16112 2415 aa9.48□□□□□ -0.89
LDB3-202ENST00000361373 MT-ATP8P03928 68 aa9.48□□□□□ -0.89
LDB3-202ENST00000361373 TSPEAR-AS2P59090 65 aa9.48□□□□□ -0.89
LDB3-202ENST00000361373 SPINK6Q6UWN8 80 aa9.48□□□□□ -0.89
LDB3-202ENST00000361373 IGLV9-49A0A0B4J1Y8 123 aa9.47□□□□□ -0.89
LDB3-202ENST00000361373 FAM240AA0A1B0GVK7 77 aa9.46□□□□□ -0.89
LDB3-202ENST00000361373 KRTAP24-1Q3LI83 254 aa9.46□□□□□ -0.89
LDB3-202ENST00000361373 LINC01546A6NGU7 62 aa9.46□□□□□ -0.9
LDB3-202ENST00000361373 NDUFC1O43677 76 aa9.46□□□□□ -0.9
LDB3-202ENST00000361373 AGRNO00468 2067 aa9.45□□□□□ -0.9
LDB3-202ENST00000361373 MRPL55Q7Z7F7 128 aaKnown RBP9.45□□□□□ -0.9
LDB3-202ENST00000361373 FAM19A3Q7Z5A8 133 aa9.45□□□□□ -0.9
LDB3-202ENST00000361373 PTPRBP23467 1997 aa9.44□□□□□ -0.9
LDB3-202ENST00000361373 LINC00315P59091 139 aa9.44□□□□□ -0.9
LDB3-202ENST00000361373 C1orf137Q5JT78 98 aa9.44□□□□□ -0.9
LDB3-202ENST00000361373 ADAMTSL4-AS1Q5T5F5 129 aa9.44□□□□□ -0.9
LDB3-202ENST00000361373 CELA1Q9UNI1 258 aa9.44□□□□□ -0.9
LDB3-202ENST00000361373 IGLV5-39A0A0G2JS06 123 aa9.43□□□□□ -0.9
LDB3-202ENST00000361373 IGHV3OR16-9A0A0B4J2B5 98 aa9.42□□□□□ -0.9
LDB3-202ENST00000361373 SERP2Q8N6R1 65 aa9.41□□□□□ -0.9
LDB3-202ENST00000361373 X6R8D5 127 aa9.41□□□□□ -0.9
LDB3-202ENST00000361373 ATP5EP56381 51 aaPredicted RBP9.41□□□□□ -0.9
LDB3-202ENST00000361373 Q6ZRU5 148 aa9.41□□□□□ -0.9
LDB3-202ENST00000361373 HRCT1Q6UXD1 115 aa9.41□□□□□ -0.9
LDB3-202ENST00000361373 WFDC13Q8IUB5 93 aa9.4□□□□□ -0.9
LDB3-202ENST00000361373 C3orf22Q8N5N4 141 aa9.4□□□□□ -0.9
LDB3-202ENST00000361373 F8P00451 2351 aa9.4□□□□□ -0.9
LDB3-202ENST00000361373 TET2Q6N021 2002 aaPredicted RBP9.4□□□□□ -0.9
LDB3-202ENST00000361373 FAM236DA0A1B0GTK5 79 aa9.39□□□□□ -0.91
LDB3-202ENST00000361373 FAM236CP0DP71 79 aa9.39□□□□□ -0.91
LDB3-202ENST00000361373 PRR3P79522 188 aaKnown RBP9.39□□□□□ -0.91
LDB3-202ENST00000361373 ESRGQ1W209 222 aa9.39□□□□□ -0.91
LDB3-202ENST00000361373 MDFIQ99750 246 aa9.38□□□□□ -0.91
LDB3-202ENST00000361373 FLNBO75369 2602 aaKnown RBP9.37□□□□□ -0.91
LDB3-202ENST00000361373 Q9BRP9 147 aa9.36□□□□□ -0.91
LDB3-202ENST00000361373 LINC00575Q6W349 94 aa9.36□□□□□ -0.91
LDB3-202ENST00000361373 IGLV5-45A0A087WSX0 123 aa9.36□□□□□ -0.91
LDB3-202ENST00000361373 Q8N9L7 120 aa9.36□□□□□ -0.91
LDB3-202ENST00000361373 A0A087WYN8 130 aa9.35□□□□□ -0.91
LDB3-202ENST00000361373 PCSK5Q92824 1860 aa9.35□□□□□ -0.91
LDB3-202ENST00000361373 SBSPONQ8IVN8 264 aa9.35□□□□□ -0.91
LDB3-202ENST00000361373 Q6Q795 121 aa9.35□□□□□ -0.91
LDB3-202ENST00000361373 CIRBP-AS1Q8TBR5 109 aa9.34□□□□□ -0.91
LDB3-202ENST00000361373 C22orf24Q9Y442 160 aa9.34□□□□□ -0.91
LDB3-202ENST00000361373 V9GYY9 64 aa9.34□□□□□ -0.91
LDB3-202ENST00000361373 Q8NAQ8 132 aa9.33□□□□□ -0.92
LDB3-202ENST00000361373 COL27A1Q8IZC6 1860 aaPredicted RBP9.33□□□□□ -0.92
LDB3-202ENST00000361373 PRR15LQ9BU68 103 aa9.32□□□□□ -0.92
LDB3-202ENST00000361373 LINC00337Q8N6G1 96 aa9.31□□□□□ -0.92
LDB3-202ENST00000361373 COX7CP15954 63 aa9.31□□□□□ -0.92
LDB3-202ENST00000361373 A0A096LNT2 108 aa9.3□□□□□ -0.92
LDB3-202ENST00000361373 K7ERS5 55 aa9.3□□□□□ -0.92
LDB3-202ENST00000361373 LIMD2Q9BT23 127 aa9.3□□□□□ -0.92
LDB3-202ENST00000361373 XGP55808 180 aa9.29□□□□□ -0.92
LDB3-202ENST00000361373 SPTSSBQ8NFR3 76 aa9.29□□□□□ -0.92
LDB3-202ENST00000361373 MUC4Q99102 2169 aa9.29□□□□□ -0.92
LDB3-202ENST00000361373 A8MTW9 85 aa9.29□□□□□ -0.92
LDB3-202ENST00000361373 TRAV7A0A075B6U4 112 aa9.28□□□□□ -0.92
LDB3-202ENST00000361373 TRBV7-6A0A0J9YX20 115 aa9.28□□□□□ -0.92
LDB3-202ENST00000361373 SMCR5Q8TEV8 140 aa9.27□□□□□ -0.92
LDB3-202ENST00000361373 A0A087WSZ3 146 aa9.27□□□□□ -0.93
LDB3-202ENST00000361373 NBDYA0A0U1RRE5 68 aa9.26□□□□□ -0.93
LDB3-202ENST00000361373 C6orf48Q9UBA6 75 aa9.26□□□□□ -0.93
LDB3-202ENST00000361373 PRLHP81277 87 aa9.25□□□□□ -0.93
LDB3-202ENST00000361373 A0A1B0GW54 56 aa9.24□□□□□ -0.93
LDB3-202ENST00000361373 WWC2-AS2Q96NR7 200 aa9.24□□□□□ -0.93
LDB3-202ENST00000361373 LINC00167Q96N53 147 aa9.24□□□□□ -0.93
LDB3-202ENST00000361373 SERP1Q9Y6X1 66 aa9.24□□□□□ -0.93
LDB3-202ENST00000361373 IGHV6-1A0A0B4J1U7 121 aa9.23□□□□□ -0.93
LDB3-202ENST00000361373 SNURFQ9Y675 71 aa9.23□□□□□ -0.93
LDB3-202ENST00000361373 FAM30AQ9NZY2 134 aa9.23□□□□□ -0.93
LDB3-202ENST00000361373 LINC00588Q9Y4M8 146 aa9.22□□□□□ -0.93
LDB3-202ENST00000361373 HECTD1Q9ULT8 2610 aa9.22□□□□□ -0.93
LDB3-202ENST00000361373 DNAH10OSP0CZ25 163 aa9.22□□□□□ -0.93
LDB3-202ENST00000361373 GVQW2A0A096LPI5 108 aaPredicted RBP9.21□□□□□ -0.93
LDB3-202ENST00000361373 LINC01547P58512 204 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms