RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 EDA2RQ9HAV5 297 aa9.74□□□□□ -0.85
TRIM4-201ENST00000349062 LITAFQ99732 161 aa9.73□□□□□ -0.85
TRIM4-201ENST00000349062 OVOL2Q9BRP0 275 aa9.73□□□□□ -0.85
TRIM4-201ENST00000349062 LINC00158P58513 81 aa9.73□□□□□ -0.85
TRIM4-201ENST00000349062 SMIM1B2RUZ4 78 aa9.72□□□□□ -0.85
TRIM4-201ENST00000349062 ANGP03950 147 aaKnown RBP9.72□□□□□ -0.85
TRIM4-201ENST00000349062 LINC00526Q96FQ7 95 aa9.72□□□□□ -0.85
TRIM4-201ENST00000349062 Q9HAA7 133 aa9.72□□□□□ -0.85
TRIM4-201ENST00000349062 GAGE2AQ6NT46 116 aa9.72□□□□□ -0.85
TRIM4-201ENST00000349062 LST1O00453 97 aa9.72□□□□□ -0.85
TRIM4-201ENST00000349062 APOC4P55056 127 aa9.72□□□□□ -0.85
TRIM4-201ENST00000349062 H3BT86 120 aa9.71□□□□□ -0.85
TRIM4-201ENST00000349062 MRAPQ8TCY5 172 aa9.71□□□□□ -0.85
TRIM4-201ENST00000349062 PRO0255Q9UI72 69 aa9.71□□□□□ -0.85
TRIM4-201ENST00000349062 C9orf153Q5TBE3 101 aa9.71□□□□□ -0.86
TRIM4-201ENST00000349062 LINC00269Q8N2A0 174 aa9.71□□□□□ -0.86
TRIM4-201ENST00000349062 KRTAP24-1Q3LI83 254 aa9.7□□□□□ -0.86
TRIM4-201ENST00000349062 BAALC-AS2P0C853 105 aa9.69□□□□□ -0.86
TRIM4-201ENST00000349062 MRPL23Q16540 153 aaKnown RBP9.69□□□□□ -0.86
TRIM4-201ENST00000349062 C6orf226Q5I0X4 101 aa9.69□□□□□ -0.86
TRIM4-201ENST00000349062 KLK5Q9Y337 293 aaPredicted RBP9.69□□□□□ -0.86
TRIM4-201ENST00000349062 CYSRT1A8MQ03 144 aa9.68□□□□□ -0.86
TRIM4-201ENST00000349062 TIRAPP58753 221 aa9.68□□□□□ -0.86
TRIM4-201ENST00000349062 LINC00308Q8TCZ7 52 aa9.67□□□□□ -0.86
TRIM4-201ENST00000349062 ATP5G1P05496 136 aa9.66□□□□□ -0.86
TRIM4-201ENST00000349062 Q6Q795 121 aa9.66□□□□□ -0.86
TRIM4-201ENST00000349062 SPANXDQ9BXN6 97 aa9.66□□□□□ -0.86
TRIM4-201ENST00000349062 SPANXCQ9NY87 97 aa9.66□□□□□ -0.86
TRIM4-201ENST00000349062 MIR7-3HGQ8N6C7 128 aa9.66□□□□□ -0.86
TRIM4-201ENST00000349062 OR13C6PQ8NH95 151 aa9.66□□□□□ -0.86
TRIM4-201ENST00000349062 COX7B2Q8TF08 81 aa9.66□□□□□ -0.86
TRIM4-201ENST00000349062 PPDPFQ9H3Y8 114 aa9.66□□□□□ -0.86
TRIM4-201ENST00000349062 NDUFA1O15239 70 aa9.65□□□□□ -0.86
TRIM4-201ENST00000349062 DEFB121Q5J5C9 76 aa9.65□□□□□ -0.86
TRIM4-201ENST00000349062 SPART-AS1P0CW21 52 aa9.65□□□□□ -0.86
TRIM4-201ENST00000349062 KIR2DL5BQ8NHK3 375 aa9.65□□□□□ -0.86
TRIM4-201ENST00000349062 LINC00959A0A1B0GUT2 108 aa9.64□□□□□ -0.87
TRIM4-201ENST00000349062 SOSTDC1Q6X4U4 206 aa9.64□□□□□ -0.87
TRIM4-201ENST00000349062 KLK12Q9UKR0 248 aa9.64□□□□□ -0.87
TRIM4-201ENST00000349062 M0QXV9 152 aa9.64□□□□□ -0.87
TRIM4-201ENST00000349062 MALP21145 153 aa9.64□□□□□ -0.87
TRIM4-201ENST00000349062 KRTAP10-11P60412 298 aa9.64□□□□□ -0.87
TRIM4-201ENST00000349062 IGKV3D-7A0A0C4DH55 119 aa9.64□□□□□ -0.87
TRIM4-201ENST00000349062 LOC107984640A0A0U1RRK4 108 aa9.64□□□□□ -0.87
TRIM4-201ENST00000349062 SMCR5Q8TEV8 140 aa9.64□□□□□ -0.87
TRIM4-201ENST00000349062 SS18Q15532 418 aa9.63□□□□□ -0.87
TRIM4-201ENST00000349062 COX7A2LO14548 114 aa9.62□□□□□ -0.87
TRIM4-201ENST00000349062 DNAL4O96015 105 aa9.62□□□□□ -0.87
TRIM4-201ENST00000349062 C9orf116Q5BN46 136 aaPredicted RBP9.62□□□□□ -0.87
TRIM4-201ENST00000349062 SDIM1Q6ZPB5 146 aa9.62□□□□□ -0.87
TRIM4-201ENST00000349062 Q8NAQ8 132 aa9.61□□□□□ -0.87
TRIM4-201ENST00000349062 SMIM9A6NGZ8 99 aa9.61□□□□□ -0.87
TRIM4-201ENST00000349062 CSDC2Q9Y534 153 aaKnown RBP9.61□□□□□ -0.87
TRIM4-201ENST00000349062 IGLV5-39A0A0G2JS06 123 aa9.61□□□□□ -0.87
TRIM4-201ENST00000349062 LYRM9A8MSI8 78 aa9.61□□□□□ -0.87
TRIM4-201ENST00000349062 FAM218AQ96MZ4 157 aa9.61□□□□□ -0.87
TRIM4-201ENST00000349062 IGLV5-45A0A087WSX0 123 aa9.6□□□□□ -0.87
TRIM4-201ENST00000349062 PRR3P79522 188 aaKnown RBP9.6□□□□□ -0.87
TRIM4-201ENST00000349062 Q6ZTC4 211 aa9.6□□□□□ -0.87
TRIM4-201ENST00000349062 C14orf132Q9NPU4 83 aa9.6□□□□□ -0.87
TRIM4-201ENST00000349062 IGHV3OR16-9A0A0B4J2B5 98 aa9.59□□□□□ -0.87
TRIM4-201ENST00000349062 REG3AQ06141 175 aa9.59□□□□□ -0.87
TRIM4-201ENST00000349062 CHCHD10Q8WYQ3 142 aaPredicted RBP9.59□□□□□ -0.87
TRIM4-201ENST00000349062 SLPIP03973 132 aa9.58□□□□□ -0.88
TRIM4-201ENST00000349062 NANOS2P60321 138 aaKnown RBP9.58□□□□□ -0.88
TRIM4-201ENST00000349062 SND1-IT1Q9HBX3 110 aa9.58□□□□□ -0.88
TRIM4-201ENST00000349062 STAB2Q8WWQ8 2551 aa9.58□□□□□ -0.88
TRIM4-201ENST00000349062 CRPP02741 224 aa9.58□□□□□ -0.88
TRIM4-201ENST00000349062 LINC00643Q86TS7 51 aa9.58□□□□□ -0.88
TRIM4-201ENST00000349062 MIFP14174 115 aa9.58□□□□□ -0.88
TRIM4-201ENST00000349062 CFAP161Q6P656 301 aa9.58□□□□□ -0.88
TRIM4-201ENST00000349062 FAM240AA0A1B0GVK7 77 aa9.57□□□□□ -0.88
TRIM4-201ENST00000349062 C6orf223Q8N319 242 aa9.57□□□□□ -0.88
TRIM4-201ENST00000349062 A0A0J9YWU9 116 aa9.57□□□□□ -0.88
TRIM4-201ENST00000349062 hADV29S1A0JD25 119 aa9.57□□□□□ -0.88
TRIM4-201ENST00000349062 A0A087WVE0 104 aa9.56□□□□□ -0.88
TRIM4-201ENST00000349062 TRBV7-7A0A0K0K1E9 115 aa9.56□□□□□ -0.88
TRIM4-201ENST00000349062 HIST1H4AP62805 103 aaKnown RBP9.56□□□□□ -0.88
TRIM4-201ENST00000349062 C3orf22Q8N5N4 141 aa9.56□□□□□ -0.88
TRIM4-201ENST00000349062 WFDC9Q8NEX5 89 aa9.56□□□□□ -0.88
TRIM4-201ENST00000349062 ACYP1P07311 99 aa9.55□□□□□ -0.88
TRIM4-201ENST00000349062 TMEM126AQ9H061 195 aa9.55□□□□□ -0.88
TRIM4-201ENST00000349062 A0A087WZ39 114 aa9.54□□□□□ -0.88
TRIM4-201ENST00000349062 HIGD2BQ4VC39 106 aa9.54□□□□□ -0.88
TRIM4-201ENST00000349062 C9orf129Q5T035 196 aaKnown RBP9.54□□□□□ -0.88
TRIM4-201ENST00000349062 KPRPQ5T749 579 aaPredicted RBP9.54□□□□□ -0.88
TRIM4-201ENST00000349062 WFDC10BQ8IUB3 73 aa9.54□□□□□ -0.88
TRIM4-201ENST00000349062 A0A1B0GX51 115 aa9.53□□□□□ -0.88
TRIM4-201ENST00000349062 LECT2O14960 151 aa9.53□□□□□ -0.88
TRIM4-201ENST00000349062 CCL18P55774 89 aa9.53□□□□□ -0.88
TRIM4-201ENST00000349062 LINC00612Q8N6U2 182 aa9.53□□□□□ -0.88
TRIM4-201ENST00000349062 NCR3O14931 201 aa9.53□□□□□ -0.88
TRIM4-201ENST00000349062 TENM2Q9NT68 2774 aa9.53□□□□□ -0.88
TRIM4-201ENST00000349062 A0A087WYN8 130 aa9.52□□□□□ -0.88
TRIM4-201ENST00000349062 TIMM17BO60830 172 aa9.52□□□□□ -0.88
TRIM4-201ENST00000349062 UQCRQO14949 82 aa9.52□□□□□ -0.89
TRIM4-201ENST00000349062 INAFM2P0DMQ5 153 aa9.52□□□□□ -0.89
TRIM4-201ENST00000349062 COPS9Q8WXC6 57 aa9.52□□□□□ -0.89
TRIM4-201ENST00000349062 LINC00337Q8N6G1 96 aa9.52□□□□□ -0.89
TRIM4-201ENST00000349062 UNQ6190/PRO20217Q6UXQ8 127 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms