RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 TOMM7Q9P0U1 55 aa7.22□□□□□ -1.25
CHRNA1-202ENST00000348749 F8WDY8 70 aa7.22□□□□□ -1.25
CHRNA1-202ENST00000348749 UBE2L6O14933 153 aa7.22□□□□□ -1.25
CHRNA1-202ENST00000348749 STHQ8IWL8 128 aa7.22□□□□□ -1.25
CHRNA1-202ENST00000348749 C1orf158Q8N1D5 194 aa7.22□□□□□ -1.25
CHRNA1-202ENST00000348749 LINC00482Q8N8I6 264 aa7.22□□□□□ -1.25
CHRNA1-202ENST00000348749 TRGV1A0A0A0MS02 117 aa7.21□□□□□ -1.26
CHRNA1-202ENST00000348749 FP248Q71RG6 208 aaPredicted RBP7.21□□□□□ -1.26
CHRNA1-202ENST00000348749 TMEM86BQ8N661 226 aa7.21□□□□□ -1.26
CHRNA1-202ENST00000348749 IGHV3OR16-9A0A0B4J2B5 98 aa7.2□□□□□ -1.26
CHRNA1-202ENST00000348749 DEFB136Q30KP8 78 aa7.2□□□□□ -1.26
CHRNA1-202ENST00000348749 ODF3L2Q3SX64 289 aa7.2□□□□□ -1.26
CHRNA1-202ENST00000348749 A0A1W2PRX2 142 aa7.2□□□□□ -1.26
CHRNA1-202ENST00000348749 ATP5EP56381 51 aaPredicted RBP7.2□□□□□ -1.26
CHRNA1-202ENST00000348749 C18orf65Q6ZTR6 163 aa7.2□□□□□ -1.26
CHRNA1-202ENST00000348749 C1orf43Q9BWL3 253 aa7.2□□□□□ -1.26
CHRNA1-202ENST00000348749 A0A087WZ39 114 aa7.19□□□□□ -1.26
CHRNA1-202ENST00000348749 NDUFC1O43677 76 aa7.19□□□□□ -1.26
CHRNA1-202ENST00000348749 IGHV4-31P0DP07 118 aa7.19□□□□□ -1.26
CHRNA1-202ENST00000348749 CREBBPQ92793 2442 aa7.19□□□□□ -1.26
CHRNA1-202ENST00000348749 SVEP1Q4LDE5 3571 aa7.19□□□□□ -1.26
CHRNA1-202ENST00000348749 LOC110117498A0A087WWA1 95 aa7.19□□□□□ -1.26
CHRNA1-202ENST00000348749 NANOS2P60321 138 aaKnown RBP7.19□□□□□ -1.26
CHRNA1-202ENST00000348749 Q6ZQT0 140 aa7.19□□□□□ -1.26
CHRNA1-202ENST00000348749 C16orf74Q96GX8 76 aa7.18□□□□□ -1.26
CHRNA1-202ENST00000348749 PTPN13Q12923 2485 aa7.18□□□□□ -1.26
CHRNA1-202ENST00000348749 DOPEY1Q5JWR5 2465 aa7.18□□□□□ -1.26
CHRNA1-202ENST00000348749 USP9XQ93008 2570 aaPredicted RBP7.18□□□□□ -1.26
CHRNA1-202ENST00000348749 F8WEM9 126 aa7.17□□□□□ -1.26
CHRNA1-202ENST00000348749 RPL35AP18077 110 aaKnown RBP7.17□□□□□ -1.26
CHRNA1-202ENST00000348749 LINC01547P58512 204 aaPredicted RBP7.17□□□□□ -1.26
CHRNA1-202ENST00000348749 Q6ZTI0 123 aa7.17□□□□□ -1.26
CHRNA1-202ENST00000348749 RMI2Q96E14 147 aa7.17□□□□□ -1.26
CHRNA1-202ENST00000348749 CXCL6P80162 114 aa7.16□□□□□ -1.26
CHRNA1-202ENST00000348749 C11orf44Q8N8P7 122 aa7.16□□□□□ -1.26
CHRNA1-202ENST00000348749 TRAV10A0A0B4J240 114 aa7.15□□□□□ -1.26
CHRNA1-202ENST00000348749 TRBV7-6A0A0J9YX20 115 aa7.15□□□□□ -1.26
CHRNA1-202ENST00000348749 KHDC1LQ5JSQ8 128 aa7.15□□□□□ -1.26
CHRNA1-202ENST00000348749 C6orf223Q8N319 242 aa7.15□□□□□ -1.26
CHRNA1-202ENST00000348749 ZFHX3Q15911 3703 aa7.15□□□□□ -1.26
CHRNA1-202ENST00000348749 ZNF561-AS1K7EIQ3 104 aa7.15□□□□□ -1.27
CHRNA1-202ENST00000348749 RBM3P98179 157 aaKnown RBP7.15□□□□□ -1.27
CHRNA1-202ENST00000348749 Q6ZVQ6 151 aa7.15□□□□□ -1.27
CHRNA1-202ENST00000348749 SNURFQ9Y675 71 aa7.15□□□□□ -1.27
CHRNA1-202ENST00000348749 CELSR1Q9NYQ6 3014 aa7.14□□□□□ -1.27
CHRNA1-202ENST00000348749 SPG11Q96JI7 2443 aa7.14□□□□□ -1.27
CHRNA1-202ENST00000348749 IGLV4-60A0A075B6I1 120 aa7.14□□□□□ -1.27
CHRNA1-202ENST00000348749 UBR5O95071 2799 aaPredicted RBP7.14□□□□□ -1.27
CHRNA1-202ENST00000348749 CR1P17927 2039 aa7.14□□□□□ -1.27
CHRNA1-202ENST00000348749 TRBV7-4A0A0J9YYF1 115 aa7.13□□□□□ -1.27
CHRNA1-202ENST00000348749 C6orf226Q5I0X4 101 aa7.13□□□□□ -1.27
CHRNA1-202ENST00000348749 WFDC11Q8NEX6 87 aa7.13□□□□□ -1.27
CHRNA1-202ENST00000348749 NOP10Q9NPE3 64 aaKnown RBP7.13□□□□□ -1.27
CHRNA1-202ENST00000348749 PKIGQ9Y2B9 76 aa7.13□□□□□ -1.27
CHRNA1-202ENST00000348749 TRBV6-8A0A0A6YYG3 113 aa7.13□□□□□ -1.27
CHRNA1-202ENST00000348749 PDE6GP18545 87 aa7.13□□□□□ -1.27
CHRNA1-202ENST00000348749 LINC00575Q6W349 94 aa7.13□□□□□ -1.27
CHRNA1-202ENST00000348749 Q8IZM0 81 aa7.13□□□□□ -1.27
CHRNA1-202ENST00000348749 TEX15Q9BXT5 2789 aa7.12□□□□□ -1.27
CHRNA1-202ENST00000348749 TRGV2A0A075B6R0 118 aa7.12□□□□□ -1.27
CHRNA1-202ENST00000348749 IGKV3OR2-268A0A0C4DH90 116 aa7.12□□□□□ -1.27
CHRNA1-202ENST00000348749 PLAC8L1A1L4L8 177 aa7.12□□□□□ -1.27
CHRNA1-202ENST00000348749 C9orf66Q5T8R8 295 aa7.12□□□□□ -1.27
CHRNA1-202ENST00000348749 CCL24O00175 119 aa7.11□□□□□ -1.27
CHRNA1-202ENST00000348749 ERC2-IT1O76042 136 aa7.11□□□□□ -1.27
CHRNA1-202ENST00000348749 HAMPP81172 84 aa7.11□□□□□ -1.27
CHRNA1-202ENST00000348749 LINC00474Q9P2X8 69 aa7.11□□□□□ -1.27
CHRNA1-202ENST00000348749 MYO9AB2RTY4 2548 aa7.11□□□□□ -1.27
CHRNA1-202ENST00000348749 TRGV4A0A0C4DH28 118 aa7.11□□□□□ -1.27
CHRNA1-202ENST00000348749 LINC00959A0A1B0GUT2 108 aa7.11□□□□□ -1.27
CHRNA1-202ENST00000348749 H3BQ85 93 aa7.11□□□□□ -1.27
CHRNA1-202ENST00000348749 MAPK1IP1LQ8NDC0 245 aa7.11□□□□□ -1.27
CHRNA1-202ENST00000348749 M0R2N4 97 aa7.1□□□□□ -1.27
CHRNA1-202ENST00000348749 GIG44P09565 113 aaPredicted RBP7.1□□□□□ -1.27
CHRNA1-202ENST00000348749 MIFP14174 115 aa7.1□□□□□ -1.27
CHRNA1-202ENST00000348749 COX17Q14061 63 aa7.1□□□□□ -1.27
CHRNA1-202ENST00000348749 LOC100131303A0A0U1RQF7 123 aa7.09□□□□□ -1.27
CHRNA1-202ENST00000348749 DEFB113Q30KQ7 82 aa7.09□□□□□ -1.27
CHRNA1-202ENST00000348749 C6orf99Q4VX62 202 aa7.09□□□□□ -1.27
CHRNA1-202ENST00000348749 Q8N3U1 123 aa7.09□□□□□ -1.27
CHRNA1-202ENST00000348749 C11orf68Q9H3H3 251 aaKnown RBP7.09□□□□□ -1.27
CHRNA1-202ENST00000348749 ANKRD17O75179 2603 aaKnown RBP7.09□□□□□ -1.27
CHRNA1-202ENST00000348749 RNASE1P07998 156 aaKnown RBP7.09□□□□□ -1.27
CHRNA1-202ENST00000348749 PRR3P79522 188 aaKnown RBP7.09□□□□□ -1.27
CHRNA1-202ENST00000348749 C1orf195Q5TG92 126 aa7.09□□□□□ -1.27
CHRNA1-202ENST00000348749 BRK1Q8WUW1 75 aa7.09□□□□□ -1.27
CHRNA1-202ENST00000348749 TM2D3Q9BRN9 247 aa7.09□□□□□ -1.27
CHRNA1-202ENST00000348749 A0A1B0GUV1 79 aa7.08□□□□□ -1.28
CHRNA1-202ENST00000348749 CSNK1G2-AS1Q8NCQ2 148 aa7.08□□□□□ -1.28
CHRNA1-202ENST00000348749 LAMTOR3Q9UHA4 124 aa7.08□□□□□ -1.28
CHRNA1-202ENST00000348749 V9GYY9 64 aa7.08□□□□□ -1.28
CHRNA1-202ENST00000348749 NREPQ16612 68 aa7.07□□□□□ -1.28
CHRNA1-202ENST00000348749 IGLV1-51P01701 117 aa7.06□□□□□ -1.28
CHRNA1-202ENST00000348749 TMEM254Q8TBM7 123 aa7.06□□□□□ -1.28
CHRNA1-202ENST00000348749 C19orf73Q9NVV2 129 aa7.06□□□□□ -1.28
CHRNA1-202ENST00000348749 TEP1Q99973 2627 aaKnown RBP7.06□□□□□ -1.28
CHRNA1-202ENST00000348749 USP9YO00507 2555 aaPredicted RBP7.06□□□□□ -1.28
CHRNA1-202ENST00000348749 VPS13CQ709C8 3753 aa7.06□□□□□ -1.28
CHRNA1-202ENST00000348749 LINC00612Q8N6U2 182 aa7.06□□□□□ -1.28
CHRNA1-202ENST00000348749 MUC7Q8TAX7 377 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms