RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 C2orf82Q6UX34 121 aa9.9□□□□□ -0.82
TSPAN4-201ENST00000346501 Q6ZRP5 223 aa9.9□□□□□ -0.82
TSPAN4-201ENST00000346501 GAGE2DQ9UEU5 116 aa9.9□□□□□ -0.82
TSPAN4-201ENST00000346501 VPS13BQ7Z7G8 4022 aa9.88□□□□□ -0.83
TSPAN4-201ENST00000346501 NDUFC2-KCTD14E9PQ53 114 aa9.88□□□□□ -0.83
TSPAN4-201ENST00000346501 PDZD11Q5EBL8 140 aa9.88□□□□□ -0.83
TSPAN4-201ENST00000346501 A0A1W2PNN7 141 aa9.87□□□□□ -0.83
TSPAN4-201ENST00000346501 F8VRH5 84 aa9.87□□□□□ -0.83
TSPAN4-201ENST00000346501 PRR3P79522 188 aaKnown RBP9.87□□□□□ -0.83
TSPAN4-201ENST00000346501 CBLN2Q8IUK8 224 aa9.86□□□□□ -0.83
TSPAN4-201ENST00000346501 CHCHD1Q96BP2 118 aaKnown RBP9.86□□□□□ -0.83
TSPAN4-201ENST00000346501 IGLV5-45A0A087WSX0 123 aa9.85□□□□□ -0.83
TSPAN4-201ENST00000346501 SMIM1B2RUZ4 78 aa9.85□□□□□ -0.83
TSPAN4-201ENST00000346501 COX7B2Q8TF08 81 aa9.85□□□□□ -0.83
TSPAN4-201ENST00000346501 HNRNPA3P51991 378 aaKnown RBP9.84□□□□□ -0.83
TSPAN4-201ENST00000346501 PMCHL1Q16048 86 aa9.84□□□□□ -0.83
TSPAN4-201ENST00000346501 BAGE3Q86Y29 109 aa9.84□□□□□ -0.83
TSPAN4-201ENST00000346501 SLC7A5P1Q8MH63 180 aa9.84□□□□□ -0.83
TSPAN4-201ENST00000346501 YPEL4Q96NS1 127 aa9.84□□□□□ -0.83
TSPAN4-201ENST00000346501 SPINK8P0C7L1 97 aa9.83□□□□□ -0.84
TSPAN4-201ENST00000346501 FAM19A5Q7Z5A7 132 aaPredicted RBP9.83□□□□□ -0.84
TSPAN4-201ENST00000346501 URB1-AS1Q96HZ7 61 aa9.83□□□□□ -0.84
TSPAN4-201ENST00000346501 HERC1Q15751 4861 aa9.83□□□□□ -0.84
TSPAN4-201ENST00000346501 A0A096LNJ9 63 aa9.82□□□□□ -0.84
TSPAN4-201ENST00000346501 HSBP1O75506 76 aa9.82□□□□□ -0.84
TSPAN4-201ENST00000346501 IGLC3P0DOY3 106 aa9.82□□□□□ -0.84
TSPAN4-201ENST00000346501 UBE2BP63146 152 aa9.81□□□□□ -0.84
TSPAN4-201ENST00000346501 REG3GQ6UW15 175 aa9.81□□□□□ -0.84
TSPAN4-201ENST00000346501 SPINK6Q6UWN8 80 aa9.81□□□□□ -0.84
TSPAN4-201ENST00000346501 PHF5AQ7RTV0 110 aaKnown RBP9.81□□□□□ -0.84
TSPAN4-201ENST00000346501 M0QXV9 152 aa9.8□□□□□ -0.84
TSPAN4-201ENST00000346501 TMEM170BQ5T4T1 132 aa9.8□□□□□ -0.84
TSPAN4-201ENST00000346501 TRGC2P03986 189 aa9.79□□□□□ -0.84
TSPAN4-201ENST00000346501 IFI27L1Q96BM0 104 aa9.79□□□□□ -0.84
TSPAN4-201ENST00000346501 CHTOPQ9Y3Y2 248 aaKnown RBP9.79□□□□□ -0.84
TSPAN4-201ENST00000346501 FAM168BA1KXE4 195 aa9.78□□□□□ -0.84
TSPAN4-201ENST00000346501 C1orf137Q5JT78 98 aa9.78□□□□□ -0.84
TSPAN4-201ENST00000346501 SFTA2Q6UW10 78 aa9.78□□□□□ -0.84
TSPAN4-201ENST00000346501 PSORS1C2Q9UIG4 136 aa9.78□□□□□ -0.84
TSPAN4-201ENST00000346501 ZNF22P17026 224 aaPredicted RBP9.77□□□□□ -0.85
TSPAN4-201ENST00000346501 LBHQ53QV2 105 aaPredicted RBP9.77□□□□□ -0.85
TSPAN4-201ENST00000346501 TRAV12-1A0A0B4J245 112 aa9.76□□□□□ -0.85
TSPAN4-201ENST00000346501 C9orf129Q5T035 196 aaKnown RBP9.76□□□□□ -0.85
TSPAN4-201ENST00000346501 SERTAD4-AS1Q5TG53 156 aa9.76□□□□□ -0.85
TSPAN4-201ENST00000346501 XAGE1AQ9HD64 81 aa9.76□□□□□ -0.85
TSPAN4-201ENST00000346501 MYCBP2O75592 4640 aa9.76□□□□□ -0.85
TSPAN4-201ENST00000346501 IGLV5-39A0A0G2JS06 123 aa9.74□□□□□ -0.85
TSPAN4-201ENST00000346501 C11orf86A6NJI1 115 aa9.74□□□□□ -0.85
TSPAN4-201ENST00000346501 LEPROTL1O95214 131 aa9.73□□□□□ -0.85
TSPAN4-201ENST00000346501 FAM19A2Q8N3H0 131 aa9.73□□□□□ -0.85
TSPAN4-201ENST00000346501 SRSF9Q13242 221 aaKnown RBP eCLIP9.72□□□□□ -0.85
TSPAN4-201ENST00000346501 DIRC1Q969H9 104 aa9.72□□□□□ -0.85
TSPAN4-201ENST00000346501 HSPB8Q9UJY1 196 aa9.72□□□□□ -0.85
TSPAN4-201ENST00000346501 ATP6V1G1O75348 118 aa9.71□□□□□ -0.86
TSPAN4-201ENST00000346501 SERF1AO75920 110 aa9.71□□□□□ -0.86
TSPAN4-201ENST00000346501 IGLV7-43P04211 117 aa9.71□□□□□ -0.86
TSPAN4-201ENST00000346501 PFN2P35080 140 aa9.71□□□□□ -0.86
TSPAN4-201ENST00000346501 COX17Q14061 63 aa9.71□□□□□ -0.86
TSPAN4-201ENST00000346501 NKAPP1Q8N9T2 125 aa9.71□□□□□ -0.86
TSPAN4-201ENST00000346501 TP73-AS1Q9UF72 201 aa9.71□□□□□ -0.86
TSPAN4-201ENST00000346501 C22orf24Q9Y442 160 aa9.71□□□□□ -0.86
TSPAN4-201ENST00000346501 COLCA2A8K830 154 aa9.7□□□□□ -0.86
TSPAN4-201ENST00000346501 H0Y8G0 127 aa9.7□□□□□ -0.86
TSPAN4-201ENST00000346501 ODF1Q14990 250 aa9.7□□□□□ -0.86
TSPAN4-201ENST00000346501 MRPL55Q7Z7F7 128 aaKnown RBP9.7□□□□□ -0.86
TSPAN4-201ENST00000346501 LINC01600Q96MT4 127 aa9.7□□□□□ -0.86
TSPAN4-201ENST00000346501 ERG28Q9UKR5 140 aa9.7□□□□□ -0.86
TSPAN4-201ENST00000346501 NUPR1O60356 82 aa9.68□□□□□ -0.86
TSPAN4-201ENST00000346501 KRTAP7-1Q8IUC3 87 aa9.68□□□□□ -0.86
TSPAN4-201ENST00000346501 PLA2G2DQ9UNK4 145 aa9.68□□□□□ -0.86
TSPAN4-201ENST00000346501 TMEM223A0PJW6 202 aa9.67□□□□□ -0.86
TSPAN4-201ENST00000346501 RPL24P83731 157 aaKnown RBP9.67□□□□□ -0.86
TSPAN4-201ENST00000346501 ZNF625Q96I27 306 aaPredicted RBP9.67□□□□□ -0.86
TSPAN4-201ENST00000346501 FABP4P15090 132 aa9.66□□□□□ -0.86
TSPAN4-201ENST00000346501 LINC00587B1AMM8 73 aa9.65□□□□□ -0.86
TSPAN4-201ENST00000346501 PLNP26678 52 aa9.65□□□□□ -0.86
TSPAN4-201ENST00000346501 LINC00158P58513 81 aa9.65□□□□□ -0.86
TSPAN4-201ENST00000346501 MT1HL1P0DM35 61 aa9.64□□□□□ -0.87
TSPAN4-201ENST00000346501 HERVK_113P61574 105 aa9.64□□□□□ -0.87
TSPAN4-201ENST00000346501 HERV-K104P63124 156 aa9.64□□□□□ -0.87
TSPAN4-201ENST00000346501 MAP1LC3CQ9BXW4 147 aa9.64□□□□□ -0.87
TSPAN4-201ENST00000346501 H0Y9J4 135 aa9.63□□□□□ -0.87
TSPAN4-201ENST00000346501 MEIG1Q5JSS6 88 aa9.63□□□□□ -0.87
TSPAN4-201ENST00000346501 KRTAP11-1Q8IUC1 163 aa9.63□□□□□ -0.87
TSPAN4-201ENST00000346501 SND1-IT1Q9HBX3 110 aa9.63□□□□□ -0.87
TSPAN4-201ENST00000346501 IGLV5-37A0A075B6J1 123 aa9.62□□□□□ -0.87
TSPAN4-201ENST00000346501 GAGE10A6NGK3 116 aa9.62□□□□□ -0.87
TSPAN4-201ENST00000346501 DPM2O94777 84 aa9.62□□□□□ -0.87
TSPAN4-201ENST00000346501 S100A1P23297 94 aa9.62□□□□□ -0.87
TSPAN4-201ENST00000346501 RPL28P46779 137 aaKnown RBP9.62□□□□□ -0.87
TSPAN4-201ENST00000346501 LINC00167Q96N53 147 aa9.62□□□□□ -0.87
TSPAN4-201ENST00000346501 MYMXA0A1B0GTQ4 84 aa9.61□□□□□ -0.87
TSPAN4-201ENST00000346501 RPL37AP8A6NKH3 93 aa9.61□□□□□ -0.87
TSPAN4-201ENST00000346501 PLEKHB2Q96CS7 222 aa9.61□□□□□ -0.87
TSPAN4-201ENST00000346501 ZNF861PO60384 105 aa9.6□□□□□ -0.87
TSPAN4-201ENST00000346501 SCO1O75880 301 aa9.6□□□□□ -0.87
TSPAN4-201ENST00000346501 LINC00310P59036 64 aa9.6□□□□□ -0.87
TSPAN4-201ENST00000346501 NDUFA12Q9UI09 145 aa9.6□□□□□ -0.87
TSPAN4-201ENST00000346501 PKHD1L1Q86WI1 4243 aa9.59□□□□□ -0.87
TSPAN4-201ENST00000346501 BCE1O60756 84 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms