RNA–Protein interactions for RNA: ENST00000345165.8

CCDC78-202, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC78, Length 1,055 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-202ENST00000345165 Q6ZRP5 223 aa11.81□□□□□ -0.52
CCDC78-202ENST00000345165 URB1-AS1Q96HZ7 61 aa11.81□□□□□ -0.52
CCDC78-202ENST00000345165 PKHD1L1Q86WI1 4243 aa11.8□□□□□ -0.52
CCDC78-202ENST00000345165 HBDP02042 147 aa11.8□□□□□ -0.52
CCDC78-202ENST00000345165 CKS1BP61024 79 aa11.8□□□□□ -0.52
CCDC78-202ENST00000345165 C9orf116Q5BN46 136 aaPredicted RBP11.8□□□□□ -0.52
CCDC78-202ENST00000345165 PDZD11Q5EBL8 140 aa11.8□□□□□ -0.52
CCDC78-202ENST00000345165 HERC1Q15751 4861 aa11.79□□□□□ -0.52
CCDC78-202ENST00000345165 A0A1W2PNN7 141 aa11.79□□□□□ -0.52
CCDC78-202ENST00000345165 C6orf226Q5I0X4 101 aa11.79□□□□□ -0.52
CCDC78-202ENST00000345165 LINC00469Q8N7U9 141 aa11.79□□□□□ -0.52
CCDC78-202ENST00000345165 SMIM1B2RUZ4 78 aa11.78□□□□□ -0.52
CCDC78-202ENST00000345165 C2orf82Q6UX34 121 aa11.78□□□□□ -0.52
CCDC78-202ENST00000345165 F8VRH5 84 aa11.77□□□□□ -0.53
CCDC78-202ENST00000345165 ATP5LO75964 103 aa11.77□□□□□ -0.53
CCDC78-202ENST00000345165 CHCHD1Q96BP2 118 aaKnown RBP11.77□□□□□ -0.53
CCDC78-202ENST00000345165 IGLC3P0DOY3 106 aa11.76□□□□□ -0.53
CCDC78-202ENST00000345165 TOMM7Q9P0U1 55 aa11.76□□□□□ -0.53
CCDC78-202ENST00000345165 H3BRM9 83 aa11.75□□□□□ -0.53
CCDC78-202ENST00000345165 SPINK6Q6UWN8 80 aa11.73□□□□□ -0.53
CCDC78-202ENST00000345165 CBLN2Q8IUK8 224 aa11.73□□□□□ -0.53
CCDC78-202ENST00000345165 LRP1Q07954 4544 aaKnown RBP11.72□□□□□ -0.53
CCDC78-202ENST00000345165 COX7B2Q8TF08 81 aa11.72□□□□□ -0.53
CCDC78-202ENST00000345165 GAGE2EQ4V326 116 aa11.71□□□□□ -0.53
CCDC78-202ENST00000345165 GAGE2DQ9UEU5 116 aa11.71□□□□□ -0.53
CCDC78-202ENST00000345165 IGLV5-39A0A0G2JS06 123 aa11.7□□□□□ -0.54
CCDC78-202ENST00000345165 SRSF9Q13242 221 aaKnown RBP eCLIP11.7□□□□□ -0.54
CCDC78-202ENST00000345165 C9orf129Q5T035 196 aaKnown RBP11.69□□□□□ -0.54
CCDC78-202ENST00000345165 PSORS1C2Q9UIG4 136 aa11.69□□□□□ -0.54
CCDC78-202ENST00000345165 FAT3Q8TDW7 4589 aa11.68□□□□□ -0.54
CCDC78-202ENST00000345165 PMCHL1Q16048 86 aa11.68□□□□□ -0.54
CCDC78-202ENST00000345165 SFTA2Q6UW10 78 aa11.68□□□□□ -0.54
CCDC78-202ENST00000345165 PHF5AQ7RTV0 110 aaKnown RBP11.68□□□□□ -0.54
CCDC78-202ENST00000345165 SLC7A5P1Q8MH63 180 aa11.68□□□□□ -0.54
CCDC78-202ENST00000345165 TRAV12-1A0A0B4J245 112 aa11.67□□□□□ -0.54
CCDC78-202ENST00000345165 FAM168BA1KXE4 195 aa11.67□□□□□ -0.54
CCDC78-202ENST00000345165 SPINK8P0C7L1 97 aa11.67□□□□□ -0.54
CCDC78-202ENST00000345165 ZNF22P17026 224 aaPredicted RBP11.67□□□□□ -0.54
CCDC78-202ENST00000345165 KRTAP7-1Q8IUC3 87 aa11.67□□□□□ -0.54
CCDC78-202ENST00000345165 M0QXV9 152 aa11.66□□□□□ -0.54
CCDC78-202ENST00000345165 NDUFA6P56556 154 aa11.66□□□□□ -0.54
CCDC78-202ENST00000345165 SERTAD4-AS1Q5TG53 156 aa11.66□□□□□ -0.54
CCDC78-202ENST00000345165 REG3GQ6UW15 175 aa11.66□□□□□ -0.54
CCDC78-202ENST00000345165 FAM19A5Q7Z5A7 132 aaPredicted RBP11.66□□□□□ -0.54
CCDC78-202ENST00000345165 MT1HL1P0DM35 61 aa11.65□□□□□ -0.54
CCDC78-202ENST00000345165 BAGE3Q86Y29 109 aa11.65□□□□□ -0.54
CCDC78-202ENST00000345165 LINC01600Q96MT4 127 aa11.65□□□□□ -0.54
CCDC78-202ENST00000345165 TP73-AS1Q9UF72 201 aa11.65□□□□□ -0.54
CCDC78-202ENST00000345165 TRGC2P03986 189 aa11.64□□□□□ -0.55
CCDC78-202ENST00000345165 IFI27L1Q96BM0 104 aa11.64□□□□□ -0.55
CCDC78-202ENST00000345165 HSBP1O75506 76 aa11.63□□□□□ -0.55
CCDC78-202ENST00000345165 PLA2G2DQ9UNK4 145 aa11.63□□□□□ -0.55
CCDC78-202ENST00000345165 C11orf86A6NJI1 115 aa11.62□□□□□ -0.55
CCDC78-202ENST00000345165 COLCA2A8K830 154 aa11.61□□□□□ -0.55
CCDC78-202ENST00000345165 COX17Q14061 63 aa11.61□□□□□ -0.55
CCDC78-202ENST00000345165 C1orf137Q5JT78 98 aa11.61□□□□□ -0.55
CCDC78-202ENST00000345165 CHTOPQ9Y3Y2 248 aaKnown RBP11.61□□□□□ -0.55
CCDC78-202ENST00000345165 IGLV7-43P04211 117 aa11.6□□□□□ -0.55
CCDC78-202ENST00000345165 LBHQ53QV2 105 aaPredicted RBP11.6□□□□□ -0.55
CCDC78-202ENST00000345165 XAGE1AQ9HD64 81 aa11.6□□□□□ -0.55
CCDC78-202ENST00000345165 TMEM170BQ5T4T1 132 aa11.59□□□□□ -0.55
CCDC78-202ENST00000345165 UBE2BP63146 152 aa11.58□□□□□ -0.56
CCDC78-202ENST00000345165 IGLV5-37A0A075B6J1 123 aa11.57□□□□□ -0.56
CCDC78-202ENST00000345165 KRTAP11-1Q8IUC1 163 aa11.57□□□□□ -0.56
CCDC78-202ENST00000345165 DIRC1Q969H9 104 aa11.57□□□□□ -0.56
CCDC78-202ENST00000345165 C22orf24Q9Y442 160 aa11.57□□□□□ -0.56
CCDC78-202ENST00000345165 NUPR1O60356 82 aa11.56□□□□□ -0.56
CCDC78-202ENST00000345165 SERF1AO75920 110 aa11.56□□□□□ -0.56
CCDC78-202ENST00000345165 LINC00310P59036 64 aa11.56□□□□□ -0.56
CCDC78-202ENST00000345165 ZNF625Q96I27 306 aaPredicted RBP11.56□□□□□ -0.56
CCDC78-202ENST00000345165 TMEM223A0PJW6 202 aa11.55□□□□□ -0.56
CCDC78-202ENST00000345165 MRPL55Q7Z7F7 128 aaKnown RBP11.55□□□□□ -0.56
CCDC78-202ENST00000345165 FAM19A2Q8N3H0 131 aa11.55□□□□□ -0.56
CCDC78-202ENST00000345165 LEPROTL1O95214 131 aa11.54□□□□□ -0.56
CCDC78-202ENST00000345165 ERG28Q9UKR5 140 aa11.54□□□□□ -0.56
CCDC78-202ENST00000345165 HSPB8Q9UJY1 196 aa11.53□□□□□ -0.56
CCDC78-202ENST00000345165 H0Y9J4 135 aa11.52□□□□□ -0.57
CCDC78-202ENST00000345165 KRTAP10-8P60410 259 aa11.52□□□□□ -0.57
CCDC78-202ENST00000345165 PLNP26678 52 aa11.5□□□□□ -0.57
CCDC78-202ENST00000345165 PFN2P35080 140 aa11.49□□□□□ -0.57
CCDC78-202ENST00000345165 HERV-K104P63124 156 aa11.48□□□□□ -0.57
CCDC78-202ENST00000345165 NKAPP1Q8N9T2 125 aa11.48□□□□□ -0.57
CCDC78-202ENST00000345165 SND1-IT1Q9HBX3 110 aa11.48□□□□□ -0.57
CCDC78-202ENST00000345165 ZNF861PO60384 105 aa11.47□□□□□ -0.57
CCDC78-202ENST00000345165 LINC00167Q96N53 147 aa11.47□□□□□ -0.57
CCDC78-202ENST00000345165 TNXBP22105 4242 aa11.47□□□□□ -0.57
CCDC78-202ENST00000345165 LINC00587B1AMM8 73 aa11.46□□□□□ -0.57
CCDC78-202ENST00000345165 RPL24P83731 157 aaKnown RBP11.46□□□□□ -0.57
CCDC78-202ENST00000345165 BCE1O60756 84 aa11.45□□□□□ -0.58
CCDC78-202ENST00000345165 VPREB1P12018 145 aa11.45□□□□□ -0.58
CCDC78-202ENST00000345165 HIST1H2BKO60814 126 aa11.44□□□□□ -0.58
CCDC78-202ENST00000345165 HIST1H2BJP06899 126 aa11.44□□□□□ -0.58
CCDC78-202ENST00000345165 HIST1H2BOP23527 126 aa11.44□□□□□ -0.58
CCDC78-202ENST00000345165 HIST1H2BBP33778 126 aa11.44□□□□□ -0.58
CCDC78-202ENST00000345165 HIST1H2BDP58876 126 aa11.44□□□□□ -0.58
CCDC78-202ENST00000345165 HIST1H2BCP62807 126 aa11.44□□□□□ -0.58
CCDC78-202ENST00000345165 HIST2H2BEQ16778 126 aa11.44□□□□□ -0.58
CCDC78-202ENST00000345165 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.44□□□□□ -0.58
CCDC78-202ENST00000345165 HIST1H2BHQ93079 126 aa11.44□□□□□ -0.58
CCDC78-202ENST00000345165 HIST1H2BNQ99877 126 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms