RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 LINC00158P58513 81 aa5.47□□□□□ -1.53
HMGCR-202ENST00000343975 LINC01545Q5VT33 79 aa5.47□□□□□ -1.53
HMGCR-202ENST00000343975 ZNF22P17026 224 aaPredicted RBP5.47□□□□□ -1.53
HMGCR-202ENST00000343975 IGLV4-69A0A075B6H9 119 aa5.46□□□□□ -1.53
HMGCR-202ENST00000343975 NDUFA12Q9UI09 145 aa5.46□□□□□ -1.53
HMGCR-202ENST00000343975 LINC00310P59036 64 aa5.46□□□□□ -1.54
HMGCR-202ENST00000343975 HERV-K104P63124 156 aa5.46□□□□□ -1.54
HMGCR-202ENST00000343975 BVES-AS1Q5T3Y7 98 aa5.46□□□□□ -1.54
HMGCR-202ENST00000343975 IGHV3OR16-9A0A0B4J2B5 98 aa5.46□□□□□ -1.54
HMGCR-202ENST00000343975 NTN5Q8WTR8 489 aaPredicted RBP5.46□□□□□ -1.54
HMGCR-202ENST00000343975 ZNF815PA8K554 130 aa5.45□□□□□ -1.54
HMGCR-202ENST00000343975 J3QQQ9 107 aa5.45□□□□□ -1.54
HMGCR-202ENST00000343975 LEPROTO15243 131 aa5.45□□□□□ -1.54
HMGCR-202ENST00000343975 Q6ZR54 194 aa5.45□□□□□ -1.54
HMGCR-202ENST00000343975 FOXI1Q12951 378 aa5.45□□□□□ -1.54
HMGCR-202ENST00000343975 Q8IZM0 81 aa5.45□□□□□ -1.54
HMGCR-202ENST00000343975 C2orf48Q96LS8 159 aa5.45□□□□□ -1.54
HMGCR-202ENST00000343975 RPL18AQ02543 176 aaKnown RBP5.45□□□□□ -1.54
HMGCR-202ENST00000343975 SRSF9Q13242 221 aaKnown RBP eCLIP5.45□□□□□ -1.54
HMGCR-202ENST00000343975 A0A087WTM6 91 aa5.44□□□□□ -1.54
HMGCR-202ENST00000343975 FABP2P12104 132 aa5.44□□□□□ -1.54
HMGCR-202ENST00000343975 PGPEP1Q9NXJ5 209 aa5.44□□□□□ -1.54
HMGCR-202ENST00000343975 PFN2P35080 140 aa5.44□□□□□ -1.54
HMGCR-202ENST00000343975 HSD52Q0P140 79 aa5.44□□□□□ -1.54
HMGCR-202ENST00000343975 ZNF625Q96I27 306 aaPredicted RBP5.44□□□□□ -1.54
HMGCR-202ENST00000343975 COX6A2Q02221 97 aa5.43□□□□□ -1.54
HMGCR-202ENST00000343975 GAGE2BQ13066 116 aa5.43□□□□□ -1.54
HMGCR-202ENST00000343975 KRTAP1-5Q9BYS1 174 aa5.43□□□□□ -1.54
HMGCR-202ENST00000343975 A0A0U1RRA0 63 aa5.43□□□□□ -1.54
HMGCR-202ENST00000343975 TMEM223A0PJW6 202 aa5.43□□□□□ -1.54
HMGCR-202ENST00000343975 SPCS1Q9Y6A9 102 aa5.43□□□□□ -1.54
HMGCR-202ENST00000343975 SMIM1B2RUZ4 78 aa5.43□□□□□ -1.54
HMGCR-202ENST00000343975 E9PLD3 99 aa5.43□□□□□ -1.54
HMGCR-202ENST00000343975 H3BUT2 72 aa5.43□□□□□ -1.54
HMGCR-202ENST00000343975 K7EP34 96 aa5.43□□□□□ -1.54
HMGCR-202ENST00000343975 LINC00474Q9P2X8 69 aa5.43□□□□□ -1.54
HMGCR-202ENST00000343975 GVQW2A0A096LPI5 108 aaPredicted RBP5.42□□□□□ -1.54
HMGCR-202ENST00000343975 LOC107984640A0A0U1RRK4 108 aa5.42□□□□□ -1.54
HMGCR-202ENST00000343975 LINC00526Q96FQ7 95 aa5.42□□□□□ -1.54
HMGCR-202ENST00000343975 TRBV30A0A0K0K1B3 111 aa5.42□□□□□ -1.54
HMGCR-202ENST00000343975 C9orf118A6NHY6 69 aa5.42□□□□□ -1.54
HMGCR-202ENST00000343975 IGLV5-45A0A087WSX0 123 aa5.42□□□□□ -1.54
HMGCR-202ENST00000343975 C16orf90A8MZG2 172 aa5.42□□□□□ -1.54
HMGCR-202ENST00000343975 IGKV2-24A0A0C4DH68 120 aa5.41□□□□□ -1.54
HMGCR-202ENST00000343975 TNP2Q05952 138 aa5.41□□□□□ -1.54
HMGCR-202ENST00000343975 GAGE2EQ4V326 116 aa5.41□□□□□ -1.54
HMGCR-202ENST00000343975 FAM19A3Q7Z5A8 133 aa5.41□□□□□ -1.54
HMGCR-202ENST00000343975 GAGE2DQ9UEU5 116 aa5.41□□□□□ -1.54
HMGCR-202ENST00000343975 RTL8CO15255 209 aa5.41□□□□□ -1.54
HMGCR-202ENST00000343975 Q8N814 137 aa5.41□□□□□ -1.54
HMGCR-202ENST00000343975 NKAPP1Q8N9T2 125 aa5.41□□□□□ -1.54
HMGCR-202ENST00000343975 ERG28Q9UKR5 140 aa5.4□□□□□ -1.55
HMGCR-202ENST00000343975 C2orf82Q6UX34 121 aa5.39□□□□□ -1.55
HMGCR-202ENST00000343975 UNQ6190/PRO20217Q6UXQ8 127 aa5.39□□□□□ -1.55
HMGCR-202ENST00000343975 HIST1H4GQ99525 98 aa5.39□□□□□ -1.55
HMGCR-202ENST00000343975 Q6ZRU5 148 aa5.38□□□□□ -1.55
HMGCR-202ENST00000343975 RAB37Q96AX2 223 aa5.38□□□□□ -1.55
HMGCR-202ENST00000343975 IGLV5-39A0A0G2JS06 123 aa5.38□□□□□ -1.55
HMGCR-202ENST00000343975 COX17Q14061 63 aa5.38□□□□□ -1.55
HMGCR-202ENST00000343975 C15orf56Q8N910 161 aa5.38□□□□□ -1.55
HMGCR-202ENST00000343975 TENM2Q9NT68 2774 aa5.38□□□□□ -1.55
HMGCR-202ENST00000343975 UBE2BP63146 152 aa5.37□□□□□ -1.55
HMGCR-202ENST00000343975 A0A1W2PPM0 123 aa5.37□□□□□ -1.55
HMGCR-202ENST00000343975 SMIM13P0DJ93 91 aa5.37□□□□□ -1.55
HMGCR-202ENST00000343975 OR13C6PQ8NH95 151 aa5.37□□□□□ -1.55
HMGCR-202ENST00000343975 DNAH9Q9NYC9 4486 aa5.37□□□□□ -1.55
HMGCR-202ENST00000343975 COX8AP10176 69 aa5.37□□□□□ -1.55
HMGCR-202ENST00000343975 NDUFC2-KCTD14E9PQ53 114 aa5.36□□□□□ -1.55
HMGCR-202ENST00000343975 S100A7L2Q5SY68 101 aa5.36□□□□□ -1.55
HMGCR-202ENST00000343975 C7orf33Q8WU49 177 aa5.36□□□□□ -1.55
HMGCR-202ENST00000343975 HUWE1Q7Z6Z7 4374 aaKnown RBP5.36□□□□□ -1.55
HMGCR-202ENST00000343975 CNBPP62633 177 aaKnown RBP5.36□□□□□ -1.55
HMGCR-202ENST00000343975 BOD1L2Q8IYS8 172 aa5.36□□□□□ -1.55
HMGCR-202ENST00000343975 SNCGO76070 127 aa5.36□□□□□ -1.55
HMGCR-202ENST00000343975 MIR7-3HGQ8N6C7 128 aa5.36□□□□□ -1.55
HMGCR-202ENST00000343975 C9orf163Q8N9P6 203 aa5.36□□□□□ -1.55
HMGCR-202ENST00000343975 F8W1H4 67 aa5.35□□□□□ -1.55
HMGCR-202ENST00000343975 NAA38Q9BRA0 125 aaKnown RBP5.35□□□□□ -1.55
HMGCR-202ENST00000343975 CMYA5Q8N3K9 4069 aa5.35□□□□□ -1.55
HMGCR-202ENST00000343975 IFITM1P13164 125 aa5.35□□□□□ -1.55
HMGCR-202ENST00000343975 Q6ZRN7 208 aaPredicted RBP5.35□□□□□ -1.55
HMGCR-202ENST00000343975 MAPKAPK5-AS1Q8N8E1 139 aa5.35□□□□□ -1.55
HMGCR-202ENST00000343975 FAM104AQ969W3 186 aa5.35□□□□□ -1.55
HMGCR-202ENST00000343975 ANAPC13Q9BS18 74 aa5.35□□□□□ -1.55
HMGCR-202ENST00000343975 DNAH3Q8TD57 4116 aa5.35□□□□□ -1.55
HMGCR-202ENST00000343975 LRCOL1A6NCL2 159 aa5.34□□□□□ -1.55
HMGCR-202ENST00000343975 NPC2P61916 151 aa5.34□□□□□ -1.55
HMGCR-202ENST00000343975 XAGE1AQ9HD64 81 aa5.34□□□□□ -1.55
HMGCR-202ENST00000343975 A0A0J9YXY3 114 aa5.34□□□□□ -1.55
HMGCR-202ENST00000343975 WFDC2Q14508 124 aa5.34□□□□□ -1.55
HMGCR-202ENST00000343975 Q1RN00 199 aa5.34□□□□□ -1.55
HMGCR-202ENST00000343975 KRTAP26-1Q6PEX3 210 aa5.34□□□□□ -1.55
HMGCR-202ENST00000343975 PCP2Q8IVA1 136 aa5.34□□□□□ -1.56
HMGCR-202ENST00000343975 C6orf48Q9UBA6 75 aa5.34□□□□□ -1.56
HMGCR-202ENST00000343975 SS18L2Q9UHA2 77 aa5.34□□□□□ -1.56
HMGCR-202ENST00000343975 TIMM17BO60830 172 aa5.33□□□□□ -1.56
HMGCR-202ENST00000343975 C9orf116Q5BN46 136 aaPredicted RBP5.33□□□□□ -1.56
HMGCR-202ENST00000343975 KIAA0087Q14695 138 aa5.33□□□□□ -1.56
HMGCR-202ENST00000343975 FAM19A5Q7Z5A7 132 aaPredicted RBP5.33□□□□□ -1.56
HMGCR-202ENST00000343975 PRKDCP78527 4128 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms