RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 XGP55808 180 aa12.15□□□□□ -0.46
CDHR4-201ENST00000343366 SYCNQ0VAF6 134 aa12.15□□□□□ -0.46
CDHR4-201ENST00000343366 CAMK2N2Q96S95 79 aa12.15□□□□□ -0.46
CDHR4-201ENST00000343366 NDUFA1O15239 70 aa12.14□□□□□ -0.47
CDHR4-201ENST00000343366 C6orf226Q5I0X4 101 aa12.14□□□□□ -0.47
CDHR4-201ENST00000343366 CARD19Q96LW7 228 aa12.14□□□□□ -0.47
CDHR4-201ENST00000343366 UBR4Q5T4S7 5183 aa12.13□□□□□ -0.47
CDHR4-201ENST00000343366 C20orf202A1L168 122 aa12.13□□□□□ -0.47
CDHR4-201ENST00000343366 C5orf52A6NGY3 159 aa12.13□□□□□ -0.47
CDHR4-201ENST00000343366 IGKCP01834 107 aa12.13□□□□□ -0.47
CDHR4-201ENST00000343366 SNRPEP62304 92 aaKnown RBP12.13□□□□□ -0.47
CDHR4-201ENST00000343366 RNF151Q2KHN1 245 aa12.13□□□□□ -0.47
CDHR4-201ENST00000343366 SFTA2Q6UW10 78 aa12.13□□□□□ -0.47
CDHR4-201ENST00000343366 C3orf79P0CE67 100 aa12.12□□□□□ -0.47
CDHR4-201ENST00000343366 CKS1BP61024 79 aa12.12□□□□□ -0.47
CDHR4-201ENST00000343366 KIAA0087Q14695 138 aa12.12□□□□□ -0.47
CDHR4-201ENST00000343366 LINC01545Q5VT33 79 aa12.12□□□□□ -0.47
CDHR4-201ENST00000343366 TOMM7Q9P0U1 55 aa12.12□□□□□ -0.47
CDHR4-201ENST00000343366 IGLV5-39A0A0G2JS06 123 aa12.11□□□□□ -0.47
CDHR4-201ENST00000343366 SPINK8P0C7L1 97 aa12.11□□□□□ -0.47
CDHR4-201ENST00000343366 KRTDAPP60985 99 aa12.11□□□□□ -0.47
CDHR4-201ENST00000343366 COX7B2Q8TF08 81 aa12.11□□□□□ -0.47
CDHR4-201ENST00000343366 HIST1H2BLQ99880 126 aa12.11□□□□□ -0.47
CDHR4-201ENST00000343366 TRBV30A0A0K0K1B3 111 aa12.1□□□□□ -0.47
CDHR4-201ENST00000343366 SLPIP03973 132 aa12.1□□□□□ -0.47
CDHR4-201ENST00000343366 HERVK_113P61574 105 aa12.1□□□□□ -0.47
CDHR4-201ENST00000343366 HMCN2Q8NDA2 5059 aa12.09□□□□□ -0.47
CDHR4-201ENST00000343366 TMEM223A0PJW6 202 aa12.09□□□□□ -0.47
CDHR4-201ENST00000343366 Q5VSD8 79 aa12.09□□□□□ -0.47
CDHR4-201ENST00000343366 LINC00526Q96FQ7 95 aa12.08□□□□□ -0.48
CDHR4-201ENST00000343366 Q6ZRU5 148 aa12.07□□□□□ -0.48
CDHR4-201ENST00000343366 LINC00474Q9P2X8 69 aa12.06□□□□□ -0.48
CDHR4-201ENST00000343366 LOC107984640A0A0U1RRK4 108 aa12.05□□□□□ -0.48
CDHR4-201ENST00000343366 FUSP35637 526 aaKnown RBP eCLIP12.05□□□□□ -0.48
CDHR4-201ENST00000343366 SDIM1Q6ZPB5 146 aa12.05□□□□□ -0.48
CDHR4-201ENST00000343366 UNQ6190/PRO20217Q6UXQ8 127 aa12.04□□□□□ -0.48
CDHR4-201ENST00000343366 PMCHL2Q9BQD1 86 aa12.04□□□□□ -0.48
CDHR4-201ENST00000343366 TLX1NBP0CAT3 122 aa12.03□□□□□ -0.48
CDHR4-201ENST00000343366 KRTAP10-1P60331 282 aa12.03□□□□□ -0.48
CDHR4-201ENST00000343366 PLEKHB2Q96CS7 222 aa12.03□□□□□ -0.48
CDHR4-201ENST00000343366 LEPROTO15243 131 aa12.02□□□□□ -0.49
CDHR4-201ENST00000343366 C2orf82Q6UX34 121 aa12.02□□□□□ -0.49
CDHR4-201ENST00000343366 DNAH8Q96JB1 4490 aa12.01□□□□□ -0.49
CDHR4-201ENST00000343366 Q6ZSA8 131 aa12.01□□□□□ -0.49
CDHR4-201ENST00000343366 C6orf48Q9UBA6 75 aa12.01□□□□□ -0.49
CDHR4-201ENST00000343366 C10orf25Q5T742 122 aa12□□□□□ -0.49
CDHR4-201ENST00000343366 LINC00587B1AMM8 73 aa11.99□□□□□ -0.49
CDHR4-201ENST00000343366 E9PLD3 99 aa11.99□□□□□ -0.49
CDHR4-201ENST00000343366 NMUP48645 174 aa11.99□□□□□ -0.49
CDHR4-201ENST00000343366 HERV-K104P63124 156 aa11.99□□□□□ -0.49
CDHR4-201ENST00000343366 LINC01620Q4KN68 170 aa11.99□□□□□ -0.49
CDHR4-201ENST00000343366 NDUFC2-KCTD14E9PQ53 114 aa11.98□□□□□ -0.49
CDHR4-201ENST00000343366 COX17Q14061 63 aa11.98□□□□□ -0.49
CDHR4-201ENST00000343366 TMA7Q9Y2S6 64 aaKnown RBP11.98□□□□□ -0.49
CDHR4-201ENST00000343366 MYMXA0A1B0GTQ4 84 aa11.97□□□□□ -0.49
CDHR4-201ENST00000343366 CIRBPQ14011 172 aaKnown RBP11.97□□□□□ -0.49
CDHR4-201ENST00000343366 J3QQQ9 107 aa11.96□□□□□ -0.49
CDHR4-201ENST00000343366 LGALS3P17931 250 aaKnown RBP11.96□□□□□ -0.49
CDHR4-201ENST00000343366 PTTG1IPP53801 180 aa11.96□□□□□ -0.49
CDHR4-201ENST00000343366 RPL18AQ02543 176 aaKnown RBP11.96□□□□□ -0.49
CDHR4-201ENST00000343366 ZNF625Q96I27 306 aaPredicted RBP11.96□□□□□ -0.49
CDHR4-201ENST00000343366 LRP1Q07954 4544 aaKnown RBP11.95□□□□□ -0.5
CDHR4-201ENST00000343366 DPH3Q96FX2 82 aa11.95□□□□□ -0.5
CDHR4-201ENST00000343366 NDUFA12Q9UI09 145 aa11.95□□□□□ -0.5
CDHR4-201ENST00000343366 HSBP1L1C9JCN9 74 aa11.94□□□□□ -0.5
CDHR4-201ENST00000343366 SPACA4Q8TDM5 124 aa11.94□□□□□ -0.5
CDHR4-201ENST00000343366 A0A096LNI7 61 aa11.93□□□□□ -0.5
CDHR4-201ENST00000343366 SCGB1D1O95968 90 aa11.93□□□□□ -0.5
CDHR4-201ENST00000343366 GAGE2BQ13066 116 aa11.93□□□□□ -0.5
CDHR4-201ENST00000343366 SMR3BP02814 79 aaPredicted RBP11.92□□□□□ -0.5
CDHR4-201ENST00000343366 Q6ZRP5 223 aa11.92□□□□□ -0.5
CDHR4-201ENST00000343366 FAM30AQ9NZY2 134 aa11.92□□□□□ -0.5
CDHR4-201ENST00000343366 ERG28Q9UKR5 140 aa11.92□□□□□ -0.5
CDHR4-201ENST00000343366 IGKV2-24A0A0C4DH68 120 aa11.91□□□□□ -0.5
CDHR4-201ENST00000343366 MAJINQ3KP22 176 aa11.91□□□□□ -0.5
CDHR4-201ENST00000343366 C9orf116Q5BN46 136 aaPredicted RBP11.91□□□□□ -0.5
CDHR4-201ENST00000343366 STPG4Q8N801 248 aa11.91□□□□□ -0.5
CDHR4-201ENST00000343366 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.9□□□□□ -0.5
CDHR4-201ENST00000343366 FAT3Q8TDW7 4589 aa11.88□□□□□ -0.51
CDHR4-201ENST00000343366 GAGE2EQ4V326 116 aa11.88□□□□□ -0.51
CDHR4-201ENST00000343366 MEIG1Q5JSS6 88 aa11.88□□□□□ -0.51
CDHR4-201ENST00000343366 ATOH7Q8N100 152 aa11.88□□□□□ -0.51
CDHR4-201ENST00000343366 PLAC8Q9NZF1 115 aa11.88□□□□□ -0.51
CDHR4-201ENST00000343366 GAGE2DQ9UEU5 116 aa11.88□□□□□ -0.51
CDHR4-201ENST00000343366 CHTF8P0CG12 524 aa11.87□□□□□ -0.51
CDHR4-201ENST00000343366 PFN2P35080 140 aa11.87□□□□□ -0.51
CDHR4-201ENST00000343366 TSPEAR-AS2P59090 65 aa11.87□□□□□ -0.51
CDHR4-201ENST00000343366 JOSD1Q15040 202 aaPredicted RBP11.87□□□□□ -0.51
CDHR4-201ENST00000343366 SCXQ7RTU7 201 aa11.87□□□□□ -0.51
CDHR4-201ENST00000343366 CIRBP-AS1Q8TBR5 109 aa11.87□□□□□ -0.51
CDHR4-201ENST00000343366 A0A087WYN8 130 aa11.86□□□□□ -0.51
CDHR4-201ENST00000343366 KRTAP29-1A8MX34 341 aaPredicted RBP11.86□□□□□ -0.51
CDHR4-201ENST00000343366 FAM229AH3BQW9 127 aa11.85□□□□□ -0.51
CDHR4-201ENST00000343366 J3QL48 77 aa11.85□□□□□ -0.51
CDHR4-201ENST00000343366 LINC00158P58513 81 aa11.85□□□□□ -0.51
CDHR4-201ENST00000343366 PANO1I0J062 215 aa11.84□□□□□ -0.51
CDHR4-201ENST00000343366 ZNF815PA8K554 130 aa11.83□□□□□ -0.52
CDHR4-201ENST00000343366 HAMPP81172 84 aa11.83□□□□□ -0.52
CDHR4-201ENST00000343366 IGKV2D-26A0A0A0MRZ7 120 aa11.82□□□□□ -0.52
CDHR4-201ENST00000343366 ANKRD39Q53RE8 183 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms