RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 C20orf197Q8N268 126 aa10.42□□□□□ -0.74
PBX3-201ENST00000342287 DAND5Q8N907 189 aa10.42□□□□□ -0.74
PBX3-201ENST00000342287 VCYO14598 125 aa10.42□□□□□ -0.74
PBX3-201ENST00000342287 TMEM141Q96I45 108 aa10.42□□□□□ -0.74
PBX3-201ENST00000342287 LITAFQ99732 161 aa10.42□□□□□ -0.74
PBX3-201ENST00000342287 FP248Q71RG6 208 aaPredicted RBP10.41□□□□□ -0.74
PBX3-201ENST00000342287 NOP10Q9NPE3 64 aaKnown RBP10.41□□□□□ -0.74
PBX3-201ENST00000342287 PLAC8L1A1L4L8 177 aa10.4□□□□□ -0.74
PBX3-201ENST00000342287 NDUFC2-KCTD14E9PQ53 114 aa10.4□□□□□ -0.74
PBX3-201ENST00000342287 INAFM2P0DMQ5 153 aa10.4□□□□□ -0.74
PBX3-201ENST00000342287 APOC4P55056 127 aa10.4□□□□□ -0.74
PBX3-201ENST00000342287 A0A0J9YXV3 536 aa10.39□□□□□ -0.75
PBX3-201ENST00000342287 TRBV27A0A0K0K1C4 114 aa10.39□□□□□ -0.75
PBX3-201ENST00000342287 OXLD1Q5BKU9 147 aa10.39□□□□□ -0.75
PBX3-201ENST00000342287 Q6ZTI0 123 aa10.39□□□□□ -0.75
PBX3-201ENST00000342287 DNAL4O96015 105 aa10.39□□□□□ -0.75
PBX3-201ENST00000342287 TIMM17AQ99595 171 aa10.39□□□□□ -0.75
PBX3-201ENST00000342287 OVOL2Q9BRP0 275 aa10.39□□□□□ -0.75
PBX3-201ENST00000342287 TRRAPQ9Y4A5 3859 aa10.39□□□□□ -0.75
PBX3-201ENST00000342287 IGHV3-30-3P0DP02 117 aa10.38□□□□□ -0.75
PBX3-201ENST00000342287 EPM2AB3EWF7 344 aa10.38□□□□□ -0.75
PBX3-201ENST00000342287 SMIM26A0A096LP01 95 aa10.37□□□□□ -0.75
PBX3-201ENST00000342287 GHRHP01286 108 aa10.37□□□□□ -0.75
PBX3-201ENST00000342287 IGHV3-53P01767 116 aa10.37□□□□□ -0.75
PBX3-201ENST00000342287 MIAQ16674 131 aa10.37□□□□□ -0.75
PBX3-201ENST00000342287 Q6ZSN1 163 aa10.37□□□□□ -0.75
PBX3-201ENST00000342287 MAST4O15021 2626 aa10.37□□□□□ -0.75
PBX3-201ENST00000342287 A0A0U1RRA0 63 aa10.37□□□□□ -0.75
PBX3-201ENST00000342287 COX7A2LO14548 114 aa10.37□□□□□ -0.75
PBX3-201ENST00000342287 LINC00474Q9P2X8 69 aa10.37□□□□□ -0.75
PBX3-201ENST00000342287 IGHV4-30-4P0DP06 118 aa10.36□□□□□ -0.75
PBX3-201ENST00000342287 Q6JHZ5 121 aa10.36□□□□□ -0.75
PBX3-201ENST00000342287 EGFEM1PQ0D2K5 195 aa10.35□□□□□ -0.75
PBX3-201ENST00000342287 RETNQ9HD89 108 aa10.35□□□□□ -0.75
PBX3-201ENST00000342287 LINC00846Q9NV44 126 aa10.35□□□□□ -0.75
PBX3-201ENST00000342287 NDUFA12Q9UI09 145 aa10.35□□□□□ -0.75
PBX3-201ENST00000342287 C22orf24Q9Y442 160 aa10.35□□□□□ -0.75
PBX3-201ENST00000342287 X6R8D5 127 aa10.35□□□□□ -0.75
PBX3-201ENST00000342287 TRAV23DV6A0A075B6W5 121 aa10.35□□□□□ -0.75
PBX3-201ENST00000342287 A8MZ25 164 aa10.35□□□□□ -0.75
PBX3-201ENST00000342287 KRTAP10-11P60412 298 aa10.35□□□□□ -0.75
PBX3-201ENST00000342287 Q9HAA7 133 aa10.35□□□□□ -0.75
PBX3-201ENST00000342287 TRGV2A0A075B6R0 118 aa10.34□□□□□ -0.75
PBX3-201ENST00000342287 XCL1P47992 114 aa10.34□□□□□ -0.75
PBX3-201ENST00000342287 SS18Q15532 418 aa10.34□□□□□ -0.75
PBX3-201ENST00000342287 C14orf132Q9NPU4 83 aa10.34□□□□□ -0.75
PBX3-201ENST00000342287 DEFB135Q30KP9 77 aa10.33□□□□□ -0.76
PBX3-201ENST00000342287 STAB1Q9NY15 2570 aa10.33□□□□□ -0.76
PBX3-201ENST00000342287 C6orf226Q5I0X4 101 aa10.33□□□□□ -0.76
PBX3-201ENST00000342287 Q9UF83 564 aa10.32□□□□□ -0.76
PBX3-201ENST00000342287 UBE2D4Q9Y2X8 147 aa10.32□□□□□ -0.76
PBX3-201ENST00000342287 LYPD5Q6UWN5 251 aa10.31□□□□□ -0.76
PBX3-201ENST00000342287 TRBV10-1A0A0K0K1A3 114 aa10.3□□□□□ -0.76
PBX3-201ENST00000342287 K7EQD1 137 aa10.3□□□□□ -0.76
PBX3-201ENST00000342287 FAM19A1Q7Z5A9 133 aa10.3□□□□□ -0.76
PBX3-201ENST00000342287 FAM218AQ96MZ4 157 aa10.3□□□□□ -0.76
PBX3-201ENST00000342287 H7BZZ5 65 aa10.3□□□□□ -0.76
PBX3-201ENST00000342287 RPL28P46779 137 aaKnown RBP10.3□□□□□ -0.76
PBX3-201ENST00000342287 C9orf129Q5T035 196 aaKnown RBP10.3□□□□□ -0.76
PBX3-201ENST00000342287 LINC00612Q8N6U2 182 aa10.29□□□□□ -0.76
PBX3-201ENST00000342287 COL6A5A8TX70 2615 aa10.29□□□□□ -0.76
PBX3-201ENST00000342287 DEFB130BP0DP73 79 aa10.28□□□□□ -0.76
PBX3-201ENST00000342287 DEFB130AP0DP74 79 aa10.28□□□□□ -0.76
PBX3-201ENST00000342287 TRGV4A0A0C4DH28 118 aa10.28□□□□□ -0.76
PBX3-201ENST00000342287 RPL36AP83881 106 aaKnown RBP10.28□□□□□ -0.76
PBX3-201ENST00000342287 RBM3P98179 157 aaKnown RBP10.28□□□□□ -0.76
PBX3-201ENST00000342287 PMAIP1Q13794 54 aa10.28□□□□□ -0.76
PBX3-201ENST00000342287 C20orf203Q8NBC4 194 aa10.28□□□□□ -0.76
PBX3-201ENST00000342287 RPL36ALQ969Q0 106 aaKnown RBP10.28□□□□□ -0.76
PBX3-201ENST00000342287 TRBV6-4A0A1B0GX49 114 aa10.27□□□□□ -0.76
PBX3-201ENST00000342287 LYRM9A8MSI8 78 aa10.27□□□□□ -0.76
PBX3-201ENST00000342287 MIFP14174 115 aa10.27□□□□□ -0.76
PBX3-201ENST00000342287 FAM222AQ5U5X8 452 aa10.27□□□□□ -0.76
PBX3-201ENST00000342287 IGHV4-28A0A0C4DH34 117 aa10.26□□□□□ -0.77
PBX3-201ENST00000342287 IGHV1-58A0A0C4DH39 117 aa10.26□□□□□ -0.77
PBX3-201ENST00000342287 TIMM17BO60830 172 aa10.26□□□□□ -0.77
PBX3-201ENST00000342287 RNASE13Q5GAN3 156 aaKnown RBP10.26□□□□□ -0.77
PBX3-201ENST00000342287 MPLKIPQ8TAP9 179 aa10.26□□□□□ -0.77
PBX3-201ENST00000342287 IGHV3-38A0A0C4DH36 116 aa10.25□□□□□ -0.77
PBX3-201ENST00000342287 TRBV7-6A0A0J9YX20 115 aa10.25□□□□□ -0.77
PBX3-201ENST00000342287 Q8NAQ8 132 aa10.25□□□□□ -0.77
PBX3-201ENST00000342287 SNURFQ9Y675 71 aa10.25□□□□□ -0.77
PBX3-201ENST00000342287 IGLV4-3A0A075B6K6 122 aa10.24□□□□□ -0.77
PBX3-201ENST00000342287 DEFB4AO15263 64 aa10.24□□□□□ -0.77
PBX3-201ENST00000342287 ZNF625Q96I27 306 aaPredicted RBP10.24□□□□□ -0.77
PBX3-201ENST00000342287 CCKP06307 115 aa10.23□□□□□ -0.77
PBX3-201ENST00000342287 CHCHD7Q9BUK0 85 aa10.23□□□□□ -0.77
PBX3-201ENST00000342287 NBEAL2Q6ZNJ1 2754 aa10.22□□□□□ -0.77
PBX3-201ENST00000342287 PKD1L1Q8TDX9 2849 aa10.22□□□□□ -0.77
PBX3-201ENST00000342287 VSIG2Q96IQ7 327 aa10.22□□□□□ -0.77
PBX3-201ENST00000342287 F8WEM9 126 aa10.21□□□□□ -0.77
PBX3-201ENST00000342287 ENHOQ6UWT2 76 aa10.21□□□□□ -0.77
PBX3-201ENST00000342287 LINC00308Q8TCZ7 52 aa10.21□□□□□ -0.77
PBX3-201ENST00000342287 RMI2Q96E14 147 aa10.21□□□□□ -0.77
PBX3-201ENST00000342287 MDFIQ99750 246 aa10.21□□□□□ -0.77
PBX3-201ENST00000342287 MRPS36P82909 103 aaKnown RBP10.21□□□□□ -0.78
PBX3-201ENST00000342287 SPART-AS1P0CW21 52 aa10.2□□□□□ -0.78
PBX3-201ENST00000342287 DAD1P61803 113 aa10.2□□□□□ -0.78
PBX3-201ENST00000342287 LOC100131303A0A0U1RQF7 123 aa10.2□□□□□ -0.78
PBX3-201ENST00000342287 NCR3O14931 201 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms