RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 F8VRH5 84 aa8.65□□□□□ -1.02
UPK3BL1-201ENST00000340457 PLNP26678 52 aa8.65□□□□□ -1.02
UPK3BL1-201ENST00000340457 PRR3P79522 188 aaKnown RBP8.65□□□□□ -1.02
UPK3BL1-201ENST00000340457 S100A12P80511 92 aa8.65□□□□□ -1.02
UPK3BL1-201ENST00000340457 VCX2Q9H322 139 aa8.65□□□□□ -1.02
UPK3BL1-201ENST00000340457 A0A1B0GUV1 79 aa8.64□□□□□ -1.03
UPK3BL1-201ENST00000340457 AMELXQ99217 191 aa8.64□□□□□ -1.03
UPK3BL1-201ENST00000340457 CHTOPQ9Y3Y2 248 aaKnown RBP8.64□□□□□ -1.03
UPK3BL1-201ENST00000340457 HSBP1L1C9JCN9 74 aa8.63□□□□□ -1.03
UPK3BL1-201ENST00000340457 DPM2O94777 84 aa8.63□□□□□ -1.03
UPK3BL1-201ENST00000340457 STPG4Q8N801 248 aa8.63□□□□□ -1.03
UPK3BL1-201ENST00000340457 C12orf57Q99622 126 aa8.63□□□□□ -1.03
UPK3BL1-201ENST00000340457 IGKCP01834 107 aa8.62□□□□□ -1.03
UPK3BL1-201ENST00000340457 ZNF664Q8N3J9 261 aa8.62□□□□□ -1.03
UPK3BL1-201ENST00000340457 VAMP8Q9BV40 100 aa8.62□□□□□ -1.03
UPK3BL1-201ENST00000340457 CST9LQ9H4G1 147 aa8.62□□□□□ -1.03
UPK3BL1-201ENST00000340457 A0A0J9YXV3 536 aa8.61□□□□□ -1.03
UPK3BL1-201ENST00000340457 SEC11AP67812 179 aa8.61□□□□□ -1.03
UPK3BL1-201ENST00000340457 CFAP161Q6P656 301 aa8.61□□□□□ -1.03
UPK3BL1-201ENST00000340457 OPRPNQ99935 248 aaPredicted RBP8.61□□□□□ -1.03
UPK3BL1-201ENST00000340457 CDC42SE2Q9NRR3 84 aa8.61□□□□□ -1.03
UPK3BL1-201ENST00000340457 MRPL35Q9NZE8 188 aaKnown RBP8.61□□□□□ -1.03
UPK3BL1-201ENST00000340457 A0A096LNI7 61 aa8.6□□□□□ -1.03
UPK3BL1-201ENST00000340457 KRTAP10-8P60410 259 aa8.6□□□□□ -1.03
UPK3BL1-201ENST00000340457 RNASE13Q5GAN3 156 aaKnown RBP8.6□□□□□ -1.03
UPK3BL1-201ENST00000340457 LINC00518Q8N0U6 118 aa8.6□□□□□ -1.03
UPK3BL1-201ENST00000340457 PMCHL2Q9BQD1 86 aa8.6□□□□□ -1.03
UPK3BL1-201ENST00000340457 IGLC3P0DOY3 106 aa8.59□□□□□ -1.03
UPK3BL1-201ENST00000340457 ATOH7Q8N100 152 aa8.59□□□□□ -1.03
UPK3BL1-201ENST00000340457 IGLV4-69A0A075B6H9 119 aa8.58□□□□□ -1.04
UPK3BL1-201ENST00000340457 UBE2D1P51668 147 aa8.58□□□□□ -1.04
UPK3BL1-201ENST00000340457 HERVK_113P61574 105 aa8.58□□□□□ -1.04
UPK3BL1-201ENST00000340457 CHCHD10Q8WYQ3 142 aaPredicted RBP8.58□□□□□ -1.04
UPK3BL1-201ENST00000340457 LINC00526Q96FQ7 95 aa8.58□□□□□ -1.04
UPK3BL1-201ENST00000340457 CCL25O15444 150 aa8.57□□□□□ -1.04
UPK3BL1-201ENST00000340457 HERVK_113P63121 156 aa8.57□□□□□ -1.04
UPK3BL1-201ENST00000340457 ZC2HC1BQ5TFG8 222 aa8.57□□□□□ -1.04
UPK3BL1-201ENST00000340457 FAM19A3Q7Z5A8 133 aa8.57□□□□□ -1.04
UPK3BL1-201ENST00000340457 FAM104AQ969W3 186 aa8.57□□□□□ -1.04
UPK3BL1-201ENST00000340457 GEMIN7Q9H840 131 aaKnown RBP8.57□□□□□ -1.04
UPK3BL1-201ENST00000340457 TINCRA0A1B0GVN0 87 aa8.56□□□□□ -1.04
UPK3BL1-201ENST00000340457 C11orf86A6NJI1 115 aa8.56□□□□□ -1.04
UPK3BL1-201ENST00000340457 REG3GQ6UW15 175 aa8.56□□□□□ -1.04
UPK3BL1-201ENST00000340457 SPINK6Q6UWN8 80 aa8.56□□□□□ -1.04
UPK3BL1-201ENST00000340457 PAM16Q9Y3D7 125 aa8.56□□□□□ -1.04
UPK3BL1-201ENST00000340457 LPAP08519 4548 aa8.56□□□□□ -1.04
UPK3BL1-201ENST00000340457 GVQW2A0A096LPI5 108 aaPredicted RBP8.55□□□□□ -1.04
UPK3BL1-201ENST00000340457 TRAV13-1A0A0B4J241 112 aa8.55□□□□□ -1.04
UPK3BL1-201ENST00000340457 SS18Q15532 418 aa8.55□□□□□ -1.04
UPK3BL1-201ENST00000340457 SPATA45Q537H7 98 aa8.55□□□□□ -1.04
UPK3BL1-201ENST00000340457 TMEM170BQ5T4T1 132 aa8.55□□□□□ -1.04
UPK3BL1-201ENST00000340457 H3BRM9 83 aa8.54□□□□□ -1.04
UPK3BL1-201ENST00000340457 FOXI1Q12951 378 aa8.54□□□□□ -1.04
UPK3BL1-201ENST00000340457 TSTD3H0UI37 97 aa8.54□□□□□ -1.04
UPK3BL1-201ENST00000340457 ZNF22P17026 224 aaPredicted RBP8.54□□□□□ -1.04
UPK3BL1-201ENST00000340457 XCL1P47992 114 aa8.54□□□□□ -1.04
UPK3BL1-201ENST00000340457 SRSF9Q13242 221 aaKnown RBP eCLIP8.54□□□□□ -1.04
UPK3BL1-201ENST00000340457 LINC00469Q8N7U9 141 aa8.54□□□□□ -1.04
UPK3BL1-201ENST00000340457 IGLV5-45A0A087WSX0 123 aa8.53□□□□□ -1.04
UPK3BL1-201ENST00000340457 LINC00959A0A1B0GUT2 108 aa8.53□□□□□ -1.04
UPK3BL1-201ENST00000340457 LINC00242Q5T6M2 205 aa8.53□□□□□ -1.04
UPK3BL1-201ENST00000340457 Q6ZRP5 223 aa8.52□□□□□ -1.05
UPK3BL1-201ENST00000340457 CARD19Q96LW7 228 aa8.51□□□□□ -1.05
UPK3BL1-201ENST00000340457 LINC00474Q9P2X8 69 aa8.51□□□□□ -1.05
UPK3BL1-201ENST00000340457 TMEM223A0PJW6 202 aa8.5□□□□□ -1.05
UPK3BL1-201ENST00000340457 E9PLD3 99 aa8.5□□□□□ -1.05
UPK3BL1-201ENST00000340457 NMUP48645 174 aa8.5□□□□□ -1.05
UPK3BL1-201ENST00000340457 GAGE2BQ13066 116 aa8.49□□□□□ -1.05
UPK3BL1-201ENST00000340457 ANKRD39Q53RE8 183 aa8.49□□□□□ -1.05
UPK3BL1-201ENST00000340457 CDKN2A-AS1Q9UH64 79 aa8.49□□□□□ -1.05
UPK3BL1-201ENST00000340457 IGHV1-58A0A0C4DH39 117 aa8.48□□□□□ -1.05
UPK3BL1-201ENST00000340457 SYCNQ0VAF6 134 aa8.48□□□□□ -1.05
UPK3BL1-201ENST00000340457 CD164L2Q6UWJ8 174 aa8.48□□□□□ -1.05
UPK3BL1-201ENST00000340457 LINC01561Q8N1V8 128 aa8.48□□□□□ -1.05
UPK3BL1-201ENST00000340457 PLEKHB2Q96CS7 222 aa8.48□□□□□ -1.05
UPK3BL1-201ENST00000340457 IGHV3OR16-9A0A0B4J2B5 98 aa8.47□□□□□ -1.05
UPK3BL1-201ENST00000340457 A0A1W2PNN7 141 aa8.47□□□□□ -1.05
UPK3BL1-201ENST00000340457 LEPROTO15243 131 aa8.47□□□□□ -1.05
UPK3BL1-201ENST00000340457 SPINK8P0C7L1 97 aa8.47□□□□□ -1.05
UPK3BL1-201ENST00000340457 LGALS3P17931 250 aaKnown RBP8.47□□□□□ -1.05
UPK3BL1-201ENST00000340457 PTTG1IPP53801 180 aa8.47□□□□□ -1.05
UPK3BL1-201ENST00000340457 UQCR10Q9UDW1 63 aa8.47□□□□□ -1.05
UPK3BL1-201ENST00000340457 ZNF561-AS1K7EIQ3 104 aa8.46□□□□□ -1.06
UPK3BL1-201ENST00000340457 COX7A2LO14548 114 aa8.46□□□□□ -1.06
UPK3BL1-201ENST00000340457 COX8AP10176 69 aa8.46□□□□□ -1.06
UPK3BL1-201ENST00000340457 SLC25A34Q6PIV7 304 aa8.46□□□□□ -1.06
UPK3BL1-201ENST00000340457 A0A087WZ39 114 aa8.45□□□□□ -1.06
UPK3BL1-201ENST00000340457 SMIM1B2RUZ4 78 aa8.45□□□□□ -1.06
UPK3BL1-201ENST00000340457 APOMO95445 188 aa8.45□□□□□ -1.06
UPK3BL1-201ENST00000340457 PRO1933Q9H354 126 aa8.45□□□□□ -1.06
UPK3BL1-201ENST00000340457 PSORS1C2Q9UIG4 136 aa8.45□□□□□ -1.06
UPK3BL1-201ENST00000340457 PKIGQ9Y2B9 76 aa8.45□□□□□ -1.06
UPK3BL1-201ENST00000340457 IGKV2D-26A0A0A0MRZ7 120 aa8.44□□□□□ -1.06
UPK3BL1-201ENST00000340457 J3QQQ9 107 aa8.44□□□□□ -1.06
UPK3BL1-201ENST00000340457 MALP21145 153 aa8.44□□□□□ -1.06
UPK3BL1-201ENST00000340457 IGLV5-39A0A0G2JS06 123 aa8.43□□□□□ -1.06
UPK3BL1-201ENST00000340457 LOC107984640A0A0U1RRK4 108 aa8.43□□□□□ -1.06
UPK3BL1-201ENST00000340457 ZNF815PA8K554 130 aa8.43□□□□□ -1.06
UPK3BL1-201ENST00000340457 DLEU1O43261 78 aa8.43□□□□□ -1.06
UPK3BL1-201ENST00000340457 SFTA2Q6UW10 78 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms