RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 JMJD7-PLA2G4BH0Y9G9 81 aa6.76□□□□□ -1.33
PTCHD4-201ENST00000339488 BPY2O14599 106 aa6.76□□□□□ -1.33
PTCHD4-201ENST00000339488 PF4P02776 101 aa6.76□□□□□ -1.33
PTCHD4-201ENST00000339488 COX7B2Q8TF08 81 aa6.76□□□□□ -1.33
PTCHD4-201ENST00000339488 IGSF10Q6WRI0 2623 aa6.76□□□□□ -1.33
PTCHD4-201ENST00000339488 DEFB109BQ30KR1 87 aa6.75□□□□□ -1.33
PTCHD4-201ENST00000339488 KAAG1Q9UBP8 84 aa6.75□□□□□ -1.33
PTCHD4-201ENST00000339488 LAMTOR3Q9UHA4 124 aa6.75□□□□□ -1.33
PTCHD4-201ENST00000339488 GNLYP22749 145 aa6.75□□□□□ -1.33
PTCHD4-201ENST00000339488 Q6ZQT0 140 aa6.75□□□□□ -1.33
PTCHD4-201ENST00000339488 hDV103S1A0JD37 113 aa6.74□□□□□ -1.33
PTCHD4-201ENST00000339488 Q8N814 137 aa6.74□□□□□ -1.33
PTCHD4-201ENST00000339488 ODF3BA8MYP8 253 aa6.74□□□□□ -1.33
PTCHD4-201ENST00000339488 KTN1-AS1Q86SY8 53 aa6.74□□□□□ -1.33
PTCHD4-201ENST00000339488 C1orf64Q8NEQ6 169 aa6.74□□□□□ -1.33
PTCHD4-201ENST00000339488 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.73□□□□□ -1.33
PTCHD4-201ENST00000339488 RHPN1-AS1Q9BWJ2 59 aa6.73□□□□□ -1.33
PTCHD4-201ENST00000339488 ESM1Q9NQ30 184 aa6.73□□□□□ -1.33
PTCHD4-201ENST00000339488 CELA1Q9UNI1 258 aa6.73□□□□□ -1.33
PTCHD4-201ENST00000339488 LINC01006Q8NI28 216 aa6.73□□□□□ -1.33
PTCHD4-201ENST00000339488 MAP1AP78559 2803 aaPredicted RBP6.73□□□□□ -1.33
PTCHD4-201ENST00000339488 CRYBG3Q68DQ2 2970 aa6.72□□□□□ -1.33
PTCHD4-201ENST00000339488 TMEM256-PLSCR3K7ERE1 68 aa6.72□□□□□ -1.33
PTCHD4-201ENST00000339488 SYCNQ0VAF6 134 aa6.72□□□□□ -1.33
PTCHD4-201ENST00000339488 C19orf54Q5BKX5 351 aa6.72□□□□□ -1.33
PTCHD4-201ENST00000339488 CD164L2Q6UWJ8 174 aa6.72□□□□□ -1.33
PTCHD4-201ENST00000339488 M0R378 163 aa6.71□□□□□ -1.33
PTCHD4-201ENST00000339488 BCE1O60756 84 aa6.71□□□□□ -1.33
PTCHD4-201ENST00000339488 LINC00588Q9Y4M8 146 aa6.71□□□□□ -1.33
PTCHD4-201ENST00000339488 ANKRD17O75179 2603 aaKnown RBP6.71□□□□□ -1.34
PTCHD4-201ENST00000339488 MINOS1Q5TGZ0 78 aa6.71□□□□□ -1.34
PTCHD4-201ENST00000339488 FAM215AQ9Y5M1 114 aa6.71□□□□□ -1.34
PTCHD4-201ENST00000339488 DYNLRB2Q8TF09 96 aa6.71□□□□□ -1.34
PTCHD4-201ENST00000339488 NTM-AS1Q6ZSK4 140 aa6.7□□□□□ -1.34
PTCHD4-201ENST00000339488 CR1P17927 2039 aa6.7□□□□□ -1.34
PTCHD4-201ENST00000339488 CHD6Q8TD26 2715 aa6.7□□□□□ -1.34
PTCHD4-201ENST00000339488 Q1T7F1 81 aa6.7□□□□□ -1.34
PTCHD4-201ENST00000339488 Q8NA96 180 aa6.7□□□□□ -1.34
PTCHD4-201ENST00000339488 FAM30AQ9NZY2 134 aa6.69□□□□□ -1.34
PTCHD4-201ENST00000339488 TRBV6-4A0A1B0GX49 114 aa6.68□□□□□ -1.34
PTCHD4-201ENST00000339488 C16orf90A8MZG2 172 aa6.68□□□□□ -1.34
PTCHD4-201ENST00000339488 C6orf99Q4VX62 202 aa6.67□□□□□ -1.34
PTCHD4-201ENST00000339488 C10orf25Q5T742 122 aa6.67□□□□□ -1.34
PTCHD4-201ENST00000339488 C8orf87E5RJ46 101 aa6.67□□□□□ -1.34
PTCHD4-201ENST00000339488 LINC00167Q96N53 147 aa6.67□□□□□ -1.34
PTCHD4-201ENST00000339488 VPS13CQ709C8 3753 aa6.67□□□□□ -1.34
PTCHD4-201ENST00000339488 IGHV3-53P01767 116 aa6.67□□□□□ -1.34
PTCHD4-201ENST00000339488 OCR1Q9BZK8 76 aa6.67□□□□□ -1.34
PTCHD4-201ENST00000339488 CHKB-CPT1BH3BT56 60 aa6.66□□□□□ -1.34
PTCHD4-201ENST00000339488 CXCL6P80162 114 aa6.66□□□□□ -1.34
PTCHD4-201ENST00000339488 ZNF73O43830 326 aaPredicted RBP6.66□□□□□ -1.34
PTCHD4-201ENST00000339488 Q5VV11 94 aa6.66□□□□□ -1.34
PTCHD4-201ENST00000339488 LINC00269Q8N2A0 174 aa6.66□□□□□ -1.34
PTCHD4-201ENST00000339488 FLNCQ14315 2725 aa6.65□□□□□ -1.34
PTCHD4-201ENST00000339488 K7EMT4 169 aa6.65□□□□□ -1.34
PTCHD4-201ENST00000339488 FAM19A3Q7Z5A8 133 aa6.65□□□□□ -1.34
PTCHD4-201ENST00000339488 WNK1Q9H4A3 2382 aa6.65□□□□□ -1.34
PTCHD4-201ENST00000339488 LINC00612Q8N6U2 182 aa6.65□□□□□ -1.35
PTCHD4-201ENST00000339488 UBE2BP63146 152 aa6.64□□□□□ -1.35
PTCHD4-201ENST00000339488 LY6G6DO95868 133 aa6.64□□□□□ -1.35
PTCHD4-201ENST00000339488 SPG11Q96JI7 2443 aa6.64□□□□□ -1.35
PTCHD4-201ENST00000339488 NDUFA4O00483 81 aa6.63□□□□□ -1.35
PTCHD4-201ENST00000339488 CDC42SE2Q9NRR3 84 aa6.63□□□□□ -1.35
PTCHD4-201ENST00000339488 HRNRQ86YZ3 2850 aaPredicted RBP6.63□□□□□ -1.35
PTCHD4-201ENST00000339488 ZNF462Q96JM2 2506 aa6.63□□□□□ -1.35
PTCHD4-201ENST00000339488 MYO18BQ8IUG5 2567 aa6.63□□□□□ -1.35
PTCHD4-201ENST00000339488 IGKV4-1P06312 121 aa6.63□□□□□ -1.35
PTCHD4-201ENST00000339488 Q6ZQY7 126 aa6.63□□□□□ -1.35
PTCHD4-201ENST00000339488 Q8NDZ9 215 aa6.63□□□□□ -1.35
PTCHD4-201ENST00000339488 MUC7Q8TAX7 377 aa6.63□□□□□ -1.35
PTCHD4-201ENST00000339488 KMT2BQ9UMN6 2715 aaPredicted RBP6.62□□□□□ -1.35
PTCHD4-201ENST00000339488 LOC110117498A0A087WWA1 95 aa6.62□□□□□ -1.35
PTCHD4-201ENST00000339488 HCG22E2RYF7 251 aa6.62□□□□□ -1.35
PTCHD4-201ENST00000339488 K7EQD1 137 aa6.62□□□□□ -1.35
PTCHD4-201ENST00000339488 PSCAO43653 123 aa6.62□□□□□ -1.35
PTCHD4-201ENST00000339488 ANKHD1Q8IWZ3 2542 aaKnown RBP6.62□□□□□ -1.35
PTCHD4-201ENST00000339488 SMIM29Q86T20 159 aa6.62□□□□□ -1.35
PTCHD4-201ENST00000339488 LINC01560Q8TB33 94 aa6.62□□□□□ -1.35
PTCHD4-201ENST00000339488 IGLV4-60A0A075B6I1 120 aa6.61□□□□□ -1.35
PTCHD4-201ENST00000339488 LCA10Q71F78 164 aa6.6□□□□□ -1.35
PTCHD4-201ENST00000339488 HIVEP3Q5T1R4 2406 aa6.6□□□□□ -1.35
PTCHD4-201ENST00000339488 UTP20O75691 2785 aaKnown RBP6.6□□□□□ -1.35
PTCHD4-201ENST00000339488 ZFP36P26651 326 aaKnown RBP6.6□□□□□ -1.35
PTCHD4-201ENST00000339488 PRR15LQ9BU68 103 aa6.6□□□□□ -1.35
PTCHD4-201ENST00000339488 ERC2-IT1O76042 136 aa6.59□□□□□ -1.35
PTCHD4-201ENST00000339488 C9orf116Q5BN46 136 aaPredicted RBP6.59□□□□□ -1.35
PTCHD4-201ENST00000339488 AKAP9Q99996 3911 aa6.59□□□□□ -1.35
PTCHD4-201ENST00000339488 C3orf84H3BNL1 204 aa6.59□□□□□ -1.35
PTCHD4-201ENST00000339488 LINC00575Q6W349 94 aa6.59□□□□□ -1.35
PTCHD4-201ENST00000339488 KLK12Q9UKR0 248 aa6.59□□□□□ -1.35
PTCHD4-201ENST00000339488 FAM208BQ5VWN6 2430 aa6.59□□□□□ -1.35
PTCHD4-201ENST00000339488 USP9XQ93008 2570 aaPredicted RBP6.59□□□□□ -1.35
PTCHD4-201ENST00000339488 UBE2L6O14933 153 aa6.59□□□□□ -1.36
PTCHD4-201ENST00000339488 LY6EQ16553 131 aa6.59□□□□□ -1.36
PTCHD4-201ENST00000339488 CLPSL2Q6UWE3 100 aa6.59□□□□□ -1.36
PTCHD4-201ENST00000339488 C5orf56Q8N8D9 126 aa6.59□□□□□ -1.36
PTCHD4-201ENST00000339488 MDFIQ99750 246 aa6.59□□□□□ -1.36
PTCHD4-201ENST00000339488 A6NN06 94 aa6.58□□□□□ -1.36
PTCHD4-201ENST00000339488 LOC100131303A0A0U1RQF7 123 aa6.57□□□□□ -1.36
PTCHD4-201ENST00000339488 LRRK2Q5S007 2527 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms