RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 TMEM223A0PJW6 202 aa9.9□□□□□ -0.82
SEC13-201ENST00000337354 IGKCP01834 107 aa9.9□□□□□ -0.82
SEC13-201ENST00000337354 C3orf79P0CE67 100 aa9.9□□□□□ -0.82
SEC13-201ENST00000337354 HIST1H2BLQ99880 126 aa9.9□□□□□ -0.82
SEC13-201ENST00000337354 TRBV30A0A0K0K1B3 111 aa9.89□□□□□ -0.83
SEC13-201ENST00000337354 KRTDAPP60985 99 aa9.89□□□□□ -0.83
SEC13-201ENST00000337354 LINC01545Q5VT33 79 aa9.89□□□□□ -0.83
SEC13-201ENST00000337354 UNQ6190/PRO20217Q6UXQ8 127 aa9.89□□□□□ -0.83
SEC13-201ENST00000337354 AKR1D1P51857 326 aa9.88□□□□□ -0.83
SEC13-201ENST00000337354 PMCHL2Q9BQD1 86 aa9.88□□□□□ -0.83
SEC13-201ENST00000337354 C20orf202A1L168 122 aa9.88□□□□□ -0.83
SEC13-201ENST00000337354 CDK2AP2O75956 126 aa9.88□□□□□ -0.83
SEC13-201ENST00000337354 C10orf25Q5T742 122 aa9.88□□□□□ -0.83
SEC13-201ENST00000337354 SFTA2Q6UW10 78 aa9.88□□□□□ -0.83
SEC13-201ENST00000337354 C2orf82Q6UX34 121 aa9.88□□□□□ -0.83
SEC13-201ENST00000337354 Q6ZSA8 131 aa9.88□□□□□ -0.83
SEC13-201ENST00000337354 LOC107984640A0A0U1RRK4 108 aa9.87□□□□□ -0.83
SEC13-201ENST00000337354 LINC00474Q9P2X8 69 aa9.87□□□□□ -0.83
SEC13-201ENST00000337354 C6orf48Q9UBA6 75 aa9.87□□□□□ -0.83
SEC13-201ENST00000337354 RYR1P21817 5038 aa9.86□□□□□ -0.83
SEC13-201ENST00000337354 TLX1NBP0CAT3 122 aa9.86□□□□□ -0.83
SEC13-201ENST00000337354 HERVK_113P61574 105 aa9.86□□□□□ -0.83
SEC13-201ENST00000337354 FAM30AQ9NZY2 134 aa9.86□□□□□ -0.83
SEC13-201ENST00000337354 DNAH5Q8TE73 4624 aa9.85□□□□□ -0.83
SEC13-201ENST00000337354 LRP1BQ9NZR2 4599 aa9.84□□□□□ -0.83
SEC13-201ENST00000337354 CIRBPQ14011 172 aaKnown RBP9.84□□□□□ -0.83
SEC13-201ENST00000337354 NDUFC2-KCTD14E9PQ53 114 aa9.82□□□□□ -0.84
SEC13-201ENST00000337354 LEPROTO15243 131 aa9.82□□□□□ -0.84
SEC13-201ENST00000337354 XGP55808 180 aa9.82□□□□□ -0.84
SEC13-201ENST00000337354 PLEKHB2Q96CS7 222 aa9.82□□□□□ -0.84
SEC13-201ENST00000337354 DPH3Q96FX2 82 aa9.82□□□□□ -0.84
SEC13-201ENST00000337354 PTTG1IPP53801 180 aa9.81□□□□□ -0.84
SEC13-201ENST00000337354 GAGE2BQ13066 116 aa9.81□□□□□ -0.84
SEC13-201ENST00000337354 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.81□□□□□ -0.84
SEC13-201ENST00000337354 A0A096LNI7 61 aa9.8□□□□□ -0.84
SEC13-201ENST00000337354 E9PLD3 99 aa9.8□□□□□ -0.84
SEC13-201ENST00000337354 RPL18AQ02543 176 aaKnown RBP9.8□□□□□ -0.84
SEC13-201ENST00000337354 SPACA4Q8TDM5 124 aa9.8□□□□□ -0.84
SEC13-201ENST00000337354 ZNF625Q96I27 306 aaPredicted RBP9.8□□□□□ -0.84
SEC13-201ENST00000337354 IGKV2-24A0A0C4DH68 120 aa9.79□□□□□ -0.84
SEC13-201ENST00000337354 HERV-K104P63124 156 aa9.79□□□□□ -0.84
SEC13-201ENST00000337354 COX17Q14061 63 aa9.79□□□□□ -0.84
SEC13-201ENST00000337354 C9orf116Q5BN46 136 aaPredicted RBP9.79□□□□□ -0.84
SEC13-201ENST00000337354 Q6ZRP5 223 aa9.79□□□□□ -0.84
SEC13-201ENST00000337354 PANO1I0J062 215 aa9.78□□□□□ -0.84
SEC13-201ENST00000337354 J3QQQ9 107 aa9.78□□□□□ -0.84
SEC13-201ENST00000337354 CHTF8P0CG12 524 aa9.78□□□□□ -0.84
SEC13-201ENST00000337354 MAJINQ3KP22 176 aa9.78□□□□□ -0.84
SEC13-201ENST00000337354 SCXQ7RTU7 201 aa9.78□□□□□ -0.84
SEC13-201ENST00000337354 CIRBP-AS1Q8TBR5 109 aa9.78□□□□□ -0.84
SEC13-201ENST00000337354 MYMXA0A1B0GTQ4 84 aa9.77□□□□□ -0.84
SEC13-201ENST00000337354 LINC00587B1AMM8 73 aa9.77□□□□□ -0.84
SEC13-201ENST00000337354 NMUP48645 174 aa9.77□□□□□ -0.84
SEC13-201ENST00000337354 STPG4Q8N801 248 aa9.77□□□□□ -0.84
SEC13-201ENST00000337354 NDUFA12Q9UI09 145 aa9.77□□□□□ -0.84
SEC13-201ENST00000337354 TMA7Q9Y2S6 64 aaKnown RBP9.77□□□□□ -0.84
SEC13-201ENST00000337354 APOBP04114 4563 aaKnown RBP9.77□□□□□ -0.85
SEC13-201ENST00000337354 A0A087WYN8 130 aa9.76□□□□□ -0.85
SEC13-201ENST00000337354 LGALS3P17931 250 aaKnown RBP9.76□□□□□ -0.85
SEC13-201ENST00000337354 HAMPP81172 84 aa9.76□□□□□ -0.85
SEC13-201ENST00000337354 GAGE2EQ4V326 116 aa9.76□□□□□ -0.85
SEC13-201ENST00000337354 PLAC8Q9NZF1 115 aa9.76□□□□□ -0.85
SEC13-201ENST00000337354 GAGE2DQ9UEU5 116 aa9.76□□□□□ -0.85
SEC13-201ENST00000337354 ERG28Q9UKR5 140 aa9.76□□□□□ -0.85
SEC13-201ENST00000337354 HSPG2P98160 4391 aa9.75□□□□□ -0.85
SEC13-201ENST00000337354 SCGB1D1O95968 90 aa9.74□□□□□ -0.85
SEC13-201ENST00000337354 PFN2P35080 140 aa9.74□□□□□ -0.85
SEC13-201ENST00000337354 TSPEAR-AS2P59090 65 aa9.74□□□□□ -0.85
SEC13-201ENST00000337354 EPM2AB3EWF7 344 aa9.73□□□□□ -0.85
SEC13-201ENST00000337354 ATOH7Q8N100 152 aa9.73□□□□□ -0.85
SEC13-201ENST00000337354 MEIG1Q5JSS6 88 aa9.72□□□□□ -0.85
SEC13-201ENST00000337354 Q8N1X5 172 aa9.72□□□□□ -0.85
SEC13-201ENST00000337354 HSBP1L1C9JCN9 74 aa9.71□□□□□ -0.86
SEC13-201ENST00000337354 LINC00158P58513 81 aa9.71□□□□□ -0.86
SEC13-201ENST00000337354 C9orf129Q5T035 196 aaKnown RBP9.71□□□□□ -0.86
SEC13-201ENST00000337354 A0A1W2PNN7 141 aa9.7□□□□□ -0.86
SEC13-201ENST00000337354 XAGE1AQ9HD64 81 aa9.7□□□□□ -0.86
SEC13-201ENST00000337354 PCLOQ9Y6V0 5065 aa9.69□□□□□ -0.86
SEC13-201ENST00000337354 IGKV2D-26A0A0A0MRZ7 120 aa9.69□□□□□ -0.86
SEC13-201ENST00000337354 JOSD1Q15040 202 aaPredicted RBP9.69□□□□□ -0.86
SEC13-201ENST00000337354 ANKRD39Q53RE8 183 aa9.69□□□□□ -0.86
SEC13-201ENST00000337354 KRTAP17-1Q9BYP8 105 aa9.69□□□□□ -0.86
SEC13-201ENST00000337354 KRTAP4-5Q9BYR2 181 aa9.69□□□□□ -0.86
SEC13-201ENST00000337354 DNAH8Q96JB1 4490 aa9.68□□□□□ -0.86
SEC13-201ENST00000337354 SMR3BP02814 79 aaPredicted RBP9.68□□□□□ -0.86
SEC13-201ENST00000337354 SMIM13P0DJ93 91 aa9.68□□□□□ -0.86
SEC13-201ENST00000337354 SND1-IT1Q9HBX3 110 aa9.68□□□□□ -0.86
SEC13-201ENST00000337354 PLA2G2DQ9UNK4 145 aa9.68□□□□□ -0.86
SEC13-201ENST00000337354 FAM229AH3BQW9 127 aa9.67□□□□□ -0.86
SEC13-201ENST00000337354 ABCA13Q86UQ4 5058 aa9.66□□□□□ -0.86
SEC13-201ENST00000337354 A0A0J9YXY3 114 aa9.66□□□□□ -0.86
SEC13-201ENST00000337354 A0A0U1RRA0 63 aa9.66□□□□□ -0.86
SEC13-201ENST00000337354 ZNF815PA8K554 130 aa9.66□□□□□ -0.86
SEC13-201ENST00000337354 Q5VSD8 79 aa9.66□□□□□ -0.86
SEC13-201ENST00000337354 FAM168BA1KXE4 195 aa9.65□□□□□ -0.86
SEC13-201ENST00000337354 MIR7-3HGQ8N6C7 128 aa9.65□□□□□ -0.86
SEC13-201ENST00000337354 C7orf33Q8WU49 177 aa9.65□□□□□ -0.86
SEC13-201ENST00000337354 TIMM17BO60830 172 aa9.64□□□□□ -0.87
SEC13-201ENST00000337354 FAM19A5Q7Z5A7 132 aaPredicted RBP9.64□□□□□ -0.87
SEC13-201ENST00000337354 LINC00528Q8N1L1 170 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms