RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 PLAC8Q9NZF1 115 aa10.4□□□□□ -0.74
C11orf88-201ENST00000332814 C6orf48Q9UBA6 75 aa10.4□□□□□ -0.74
C11orf88-201ENST00000332814 IGLV5-45A0A087WSX0 123 aa10.39□□□□□ -0.75
C11orf88-201ENST00000332814 IGLC3P0DOY3 106 aa10.39□□□□□ -0.75
C11orf88-201ENST00000332814 IFI27L1Q96BM0 104 aa10.39□□□□□ -0.75
C11orf88-201ENST00000332814 DNAH8Q96JB1 4490 aa10.38□□□□□ -0.75
C11orf88-201ENST00000332814 SMIM1B2RUZ4 78 aa10.38□□□□□ -0.75
C11orf88-201ENST00000332814 LCE2BO14633 110 aa10.38□□□□□ -0.75
C11orf88-201ENST00000332814 SERF1AO75920 110 aa10.38□□□□□ -0.75
C11orf88-201ENST00000332814 SPINK8P0C7L1 97 aa10.38□□□□□ -0.75
C11orf88-201ENST00000332814 CXCL5P42830 114 aa10.38□□□□□ -0.75
C11orf88-201ENST00000332814 FAM19A2Q8N3H0 131 aa10.38□□□□□ -0.75
C11orf88-201ENST00000332814 COX7B2Q8TF08 81 aa10.37□□□□□ -0.75
C11orf88-201ENST00000332814 CHTOPQ9Y3Y2 248 aaKnown RBP10.37□□□□□ -0.75
C11orf88-201ENST00000332814 TLX1NBP0CAT3 122 aa10.36□□□□□ -0.75
C11orf88-201ENST00000332814 F8VRH5 84 aa10.35□□□□□ -0.75
C11orf88-201ENST00000332814 LEPROTL1O95214 131 aa10.35□□□□□ -0.75
C11orf88-201ENST00000332814 GAGE2EQ4V326 116 aa10.35□□□□□ -0.75
C11orf88-201ENST00000332814 GAGE2DQ9UEU5 116 aa10.35□□□□□ -0.75
C11orf88-201ENST00000332814 TRAV12-1A0A0B4J245 112 aa10.34□□□□□ -0.75
C11orf88-201ENST00000332814 ZNF22P17026 224 aaPredicted RBP10.34□□□□□ -0.75
C11orf88-201ENST00000332814 TMEM170BQ5T4T1 132 aa10.34□□□□□ -0.75
C11orf88-201ENST00000332814 NDUFC2-KCTD14E9PQ53 114 aa10.33□□□□□ -0.76
C11orf88-201ENST00000332814 H0Y8G0 127 aa10.33□□□□□ -0.76
C11orf88-201ENST00000332814 J3QL48 77 aa10.33□□□□□ -0.76
C11orf88-201ENST00000332814 Q6ZRP5 223 aa10.33□□□□□ -0.76
C11orf88-201ENST00000332814 HSPB8Q9UJY1 196 aa10.33□□□□□ -0.76
C11orf88-201ENST00000332814 C11orf86A6NJI1 115 aa10.32□□□□□ -0.76
C11orf88-201ENST00000332814 C9orf116Q5BN46 136 aaPredicted RBP10.32□□□□□ -0.76
C11orf88-201ENST00000332814 ABCA13Q86UQ4 5058 aa10.32□□□□□ -0.76
C11orf88-201ENST00000332814 S100A1P23297 94 aa10.31□□□□□ -0.76
C11orf88-201ENST00000332814 LINC00310P59036 64 aa10.31□□□□□ -0.76
C11orf88-201ENST00000332814 PCLOQ9Y6V0 5065 aa10.3□□□□□ -0.76
C11orf88-201ENST00000332814 FABP4P15090 132 aa10.3□□□□□ -0.76
C11orf88-201ENST00000332814 HIST1H2BKO60814 126 aa10.29□□□□□ -0.76
C11orf88-201ENST00000332814 HIST1H2BJP06899 126 aa10.29□□□□□ -0.76
C11orf88-201ENST00000332814 HIST1H2BOP23527 126 aa10.29□□□□□ -0.76
C11orf88-201ENST00000332814 HIST1H2BBP33778 126 aa10.29□□□□□ -0.76
C11orf88-201ENST00000332814 HIST1H2BDP58876 126 aa10.29□□□□□ -0.76
C11orf88-201ENST00000332814 HIST1H2BCP62807 126 aa10.29□□□□□ -0.76
C11orf88-201ENST00000332814 HIST2H2BEQ16778 126 aa10.29□□□□□ -0.76
C11orf88-201ENST00000332814 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.29□□□□□ -0.76
C11orf88-201ENST00000332814 HIST1H2BHQ93079 126 aa10.29□□□□□ -0.76
C11orf88-201ENST00000332814 HIST1H2BNQ99877 126 aa10.29□□□□□ -0.76
C11orf88-201ENST00000332814 HIST1H2BMQ99879 126 aa10.29□□□□□ -0.76
C11orf88-201ENST00000332814 FAT1Q14517 4588 aa10.28□□□□□ -0.76
C11orf88-201ENST00000332814 IGLV5-39A0A0G2JS06 123 aa10.28□□□□□ -0.76
C11orf88-201ENST00000332814 A0A1W2PNN7 141 aa10.28□□□□□ -0.76
C11orf88-201ENST00000332814 NUPR1O60356 82 aa10.28□□□□□ -0.76
C11orf88-201ENST00000332814 FAM19A5Q7Z5A7 132 aaPredicted RBP10.28□□□□□ -0.76
C11orf88-201ENST00000332814 ATP6V1G1O75348 118 aa10.26□□□□□ -0.77
C11orf88-201ENST00000332814 KRTAP10-4P60372 401 aaPredicted RBP10.26□□□□□ -0.77
C11orf88-201ENST00000332814 C4orf48Q5BLP8 95 aa10.26□□□□□ -0.77
C11orf88-201ENST00000332814 SFTA2Q6UW10 78 aa10.26□□□□□ -0.77
C11orf88-201ENST00000332814 MAP1LC3CQ9BXW4 147 aa10.26□□□□□ -0.77
C11orf88-201ENST00000332814 FAM168BA1KXE4 195 aa10.25□□□□□ -0.77
C11orf88-201ENST00000332814 ODF1Q14990 250 aa10.25□□□□□ -0.77
C11orf88-201ENST00000332814 TMEM223A0PJW6 202 aa10.24□□□□□ -0.77
C11orf88-201ENST00000332814 PLNP26678 52 aa10.24□□□□□ -0.77
C11orf88-201ENST00000332814 PRR3P79522 188 aaKnown RBP10.24□□□□□ -0.77
C11orf88-201ENST00000332814 PHF5AQ7RTV0 110 aaKnown RBP10.24□□□□□ -0.77
C11orf88-201ENST00000332814 XAGE1AQ9HD64 81 aa10.24□□□□□ -0.77
C11orf88-201ENST00000332814 M0QXV9 152 aa10.23□□□□□ -0.77
C11orf88-201ENST00000332814 SMCPP49901 116 aaPredicted RBP10.23□□□□□ -0.77
C11orf88-201ENST00000332814 C9orf129Q5T035 196 aaKnown RBP10.23□□□□□ -0.77
C11orf88-201ENST00000332814 PFN2P35080 140 aa10.22□□□□□ -0.77
C11orf88-201ENST00000332814 DPM2O94777 84 aa10.21□□□□□ -0.77
C11orf88-201ENST00000332814 HERVK_113P61574 105 aa10.21□□□□□ -0.77
C11orf88-201ENST00000332814 UBE2BP63146 152 aa10.21□□□□□ -0.77
C11orf88-201ENST00000332814 ZNF625Q96I27 306 aaPredicted RBP10.21□□□□□ -0.77
C11orf88-201ENST00000332814 ERG28Q9UKR5 140 aa10.2□□□□□ -0.78
C11orf88-201ENST00000332814 IGKCP01834 107 aa10.19□□□□□ -0.78
C11orf88-201ENST00000332814 PMCHL2Q9BQD1 86 aa10.19□□□□□ -0.78
C11orf88-201ENST00000332814 HNRNPA3P51991 378 aaKnown RBP10.18□□□□□ -0.78
C11orf88-201ENST00000332814 COX17Q14061 63 aa10.18□□□□□ -0.78
C11orf88-201ENST00000332814 SRRM2Q9UQ35 2752 aaKnown RBP10.18□□□□□ -0.78
C11orf88-201ENST00000332814 LBHQ53QV2 105 aaPredicted RBP10.17□□□□□ -0.78
C11orf88-201ENST00000332814 C1orf137Q5JT78 98 aa10.17□□□□□ -0.78
C11orf88-201ENST00000332814 VPS13BQ7Z7G8 4022 aa10.17□□□□□ -0.78
C11orf88-201ENST00000332814 SYS1-DBNDD2H3BUS1 97 aa10.16□□□□□ -0.78
C11orf88-201ENST00000332814 LINC00158P58513 81 aa10.16□□□□□ -0.78
C11orf88-201ENST00000332814 MEIG1Q5JSS6 88 aa10.16□□□□□ -0.78
C11orf88-201ENST00000332814 COA6Q5JTJ3 125 aaKnown RBP10.16□□□□□ -0.78
C11orf88-201ENST00000332814 SERTAD4-AS1Q5TG53 156 aa10.16□□□□□ -0.78
C11orf88-201ENST00000332814 PLEKHB2Q96CS7 222 aa10.16□□□□□ -0.78
C11orf88-201ENST00000332814 PSORS1C2Q9UIG4 136 aa10.16□□□□□ -0.78
C11orf88-201ENST00000332814 HERV-K104P63124 156 aa10.15□□□□□ -0.78
C11orf88-201ENST00000332814 KRTAP7-1Q8IUC3 87 aa10.15□□□□□ -0.78
C11orf88-201ENST00000332814 NKAPP1Q8N9T2 125 aa10.15□□□□□ -0.78
C11orf88-201ENST00000332814 NDUFA12Q9UI09 145 aa10.15□□□□□ -0.78
C11orf88-201ENST00000332814 C22orf24Q9Y442 160 aa10.15□□□□□ -0.78
C11orf88-201ENST00000332814 MYMXA0A1B0GTQ4 84 aa10.14□□□□□ -0.79
C11orf88-201ENST00000332814 LEPROTO15243 131 aa10.14□□□□□ -0.79
C11orf88-201ENST00000332814 KRTAP29-1A8MX34 341 aaPredicted RBP10.13□□□□□ -0.79
C11orf88-201ENST00000332814 LINC00587B1AMM8 73 aa10.13□□□□□ -0.79
C11orf88-201ENST00000332814 OXTP01178 125 aa10.13□□□□□ -0.79
C11orf88-201ENST00000332814 LGALS3P17931 250 aaKnown RBP10.13□□□□□ -0.79
C11orf88-201ENST00000332814 SPINK6Q6UWN8 80 aa10.13□□□□□ -0.79
C11orf88-201ENST00000332814 PET117Q6UWS5 81 aa10.13□□□□□ -0.79
C11orf88-201ENST00000332814 MRPL55Q7Z7F7 128 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms