RNA–Protein interactions for RNA: ENST00000321517.3

LINC00476-201, long intergenic non-protein coding RNA 476, humanhuman

TSL 1 (best)

Gene LINC00476, Length 1,269 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-201ENST00000321517 C3orf79P0CE67 100 aa10.77□□□□□ -0.69
LINC00476-201ENST00000321517 ZNF22P17026 224 aaPredicted RBP10.77□□□□□ -0.69
LINC00476-201ENST00000321517 CNBPP62633 177 aaKnown RBP10.77□□□□□ -0.69
LINC00476-201ENST00000321517 LINC01545Q5VT33 79 aa10.77□□□□□ -0.69
LINC00476-201ENST00000321517 C11orf86A6NJI1 115 aa10.76□□□□□ -0.69
LINC00476-201ENST00000321517 KRTDAPP60985 99 aa10.76□□□□□ -0.69
LINC00476-201ENST00000321517 LINC01620Q4KN68 170 aa10.76□□□□□ -0.69
LINC00476-201ENST00000321517 TMEM170BQ5T4T1 132 aa10.76□□□□□ -0.69
LINC00476-201ENST00000321517 Q6ZSA8 131 aa10.76□□□□□ -0.69
LINC00476-201ENST00000321517 Q8IZM0 81 aa10.76□□□□□ -0.69
LINC00476-201ENST00000321517 ORAOV1Q8WV07 137 aa10.76□□□□□ -0.69
LINC00476-201ENST00000321517 PKIGQ9Y2B9 76 aa10.76□□□□□ -0.69
LINC00476-201ENST00000321517 LRP1Q07954 4544 aaKnown RBP10.75□□□□□ -0.69
LINC00476-201ENST00000321517 IGKCP01834 107 aa10.75□□□□□ -0.69
LINC00476-201ENST00000321517 PRSS2P07478 247 aa10.75□□□□□ -0.69
LINC00476-201ENST00000321517 CXCL5P42830 114 aa10.75□□□□□ -0.69
LINC00476-201ENST00000321517 SPAG11BQ08648 103 aa10.75□□□□□ -0.69
LINC00476-201ENST00000321517 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.74□□□□□ -0.69
LINC00476-201ENST00000321517 SMIM1B2RUZ4 78 aa10.74□□□□□ -0.69
LINC00476-201ENST00000321517 SFTA2Q6UW10 78 aa10.74□□□□□ -0.69
LINC00476-201ENST00000321517 HERVK_113P61574 105 aa10.73□□□□□ -0.69
LINC00476-201ENST00000321517 IGLV5-39A0A0G2JS06 123 aa10.72□□□□□ -0.69
LINC00476-201ENST00000321517 HIGD2BQ4VC39 106 aa10.72□□□□□ -0.69
LINC00476-201ENST00000321517 C6orf226Q5I0X4 101 aa10.72□□□□□ -0.69
LINC00476-201ENST00000321517 TMEM223A0PJW6 202 aa10.71□□□□□ -0.69
LINC00476-201ENST00000321517 NDUFA1O15239 70 aa10.71□□□□□ -0.69
LINC00476-201ENST00000321517 KIAA0087Q14695 138 aa10.71□□□□□ -0.69
LINC00476-201ENST00000321517 RNF151Q2KHN1 245 aa10.71□□□□□ -0.69
LINC00476-201ENST00000321517 LINC00528Q8N1L1 170 aa10.71□□□□□ -0.69
LINC00476-201ENST00000321517 SPINK8P0C7L1 97 aa10.7□□□□□ -0.7
LINC00476-201ENST00000321517 SYCNQ0VAF6 134 aa10.7□□□□□ -0.7
LINC00476-201ENST00000321517 COX7B2Q8TF08 81 aa10.7□□□□□ -0.7
LINC00476-201ENST00000321517 CAMK2N2Q96S95 79 aa10.7□□□□□ -0.7
LINC00476-201ENST00000321517 TMA7Q9Y2S6 64 aaKnown RBP10.7□□□□□ -0.7
LINC00476-201ENST00000321517 FAT3Q8TDW7 4589 aa10.69□□□□□ -0.7
LINC00476-201ENST00000321517 CKS1BP61024 79 aa10.69□□□□□ -0.7
LINC00476-201ENST00000321517 C9orf163Q8N9P6 203 aa10.69□□□□□ -0.7
LINC00476-201ENST00000321517 CARD19Q96LW7 228 aa10.69□□□□□ -0.7
LINC00476-201ENST00000321517 TRBV30A0A0K0K1B3 111 aa10.68□□□□□ -0.7
LINC00476-201ENST00000321517 J3QL48 77 aa10.68□□□□□ -0.7
LINC00476-201ENST00000321517 KRTAP10-4P60372 401 aaPredicted RBP10.68□□□□□ -0.7
LINC00476-201ENST00000321517 SCXQ7RTU7 201 aa10.68□□□□□ -0.7
LINC00476-201ENST00000321517 TOMM7Q9P0U1 55 aa10.68□□□□□ -0.7
LINC00476-201ENST00000321517 PLEKHB2Q96CS7 222 aa10.67□□□□□ -0.7
LINC00476-201ENST00000321517 PMCHL2Q9BQD1 86 aa10.67□□□□□ -0.7
LINC00476-201ENST00000321517 PLA2G1BP04054 148 aaKnown RBP10.66□□□□□ -0.7
LINC00476-201ENST00000321517 KRTAP29-1A8MX34 341 aaPredicted RBP10.65□□□□□ -0.7
LINC00476-201ENST00000321517 LEPROTO15243 131 aa10.65□□□□□ -0.7
LINC00476-201ENST00000321517 SLPIP03973 132 aa10.65□□□□□ -0.7
LINC00476-201ENST00000321517 E9PLD3 99 aa10.64□□□□□ -0.71
LINC00476-201ENST00000321517 NMUP48645 174 aa10.64□□□□□ -0.71
LINC00476-201ENST00000321517 Q6ZRU5 148 aa10.64□□□□□ -0.71
LINC00476-201ENST00000321517 LINC00587B1AMM8 73 aa10.63□□□□□ -0.71
LINC00476-201ENST00000321517 CIRBP-AS1Q8TBR5 109 aa10.63□□□□□ -0.71
LINC00476-201ENST00000321517 PKHD1L1Q86WI1 4243 aa10.63□□□□□ -0.71
LINC00476-201ENST00000321517 SCGB1D1O95968 90 aa10.62□□□□□ -0.71
LINC00476-201ENST00000321517 TLX1NBP0CAT3 122 aa10.62□□□□□ -0.71
LINC00476-201ENST00000321517 HERV-K104P63124 156 aa10.62□□□□□ -0.71
LINC00476-201ENST00000321517 UNQ6190/PRO20217Q6UXQ8 127 aa10.62□□□□□ -0.71
LINC00476-201ENST00000321517 LINC00526Q96FQ7 95 aa10.62□□□□□ -0.71
LINC00476-201ENST00000321517 LINC00474Q9P2X8 69 aa10.62□□□□□ -0.71
LINC00476-201ENST00000321517 LOC107984640A0A0U1RRK4 108 aa10.61□□□□□ -0.71
LINC00476-201ENST00000321517 HSBP1L1C9JCN9 74 aa10.61□□□□□ -0.71
LINC00476-201ENST00000321517 HMCN2Q8NDA2 5059 aa10.6□□□□□ -0.71
LINC00476-201ENST00000321517 MYMXA0A1B0GTQ4 84 aa10.6□□□□□ -0.71
LINC00476-201ENST00000321517 J3QQQ9 107 aa10.6□□□□□ -0.71
LINC00476-201ENST00000321517 LGALS3P17931 250 aaKnown RBP10.6□□□□□ -0.71
LINC00476-201ENST00000321517 COX17Q14061 63 aa10.6□□□□□ -0.71
LINC00476-201ENST00000321517 JOSD1Q15040 202 aaPredicted RBP10.6□□□□□ -0.71
LINC00476-201ENST00000321517 C2orf82Q6UX34 121 aa10.6□□□□□ -0.71
LINC00476-201ENST00000321517 SDIM1Q6ZPB5 146 aa10.6□□□□□ -0.71
LINC00476-201ENST00000321517 ZNF625Q96I27 306 aaPredicted RBP10.59□□□□□ -0.71
LINC00476-201ENST00000321517 C6orf48Q9UBA6 75 aa10.59□□□□□ -0.71
LINC00476-201ENST00000321517 C10orf25Q5T742 122 aa10.58□□□□□ -0.72
LINC00476-201ENST00000321517 NDUFA12Q9UI09 145 aa10.58□□□□□ -0.72
LINC00476-201ENST00000321517 NDUFC2-KCTD14E9PQ53 114 aa10.57□□□□□ -0.72
LINC00476-201ENST00000321517 STPG4Q8N801 248 aa10.57□□□□□ -0.72
LINC00476-201ENST00000321517 ATOH7Q8N100 152 aa10.55□□□□□ -0.72
LINC00476-201ENST00000321517 CIRBPQ14011 172 aaKnown RBP10.54□□□□□ -0.72
LINC00476-201ENST00000321517 HNRNPA3P51991 378 aaKnown RBP10.53□□□□□ -0.72
LINC00476-201ENST00000321517 PTTG1IPP53801 180 aa10.53□□□□□ -0.72
LINC00476-201ENST00000321517 ERG28Q9UKR5 140 aa10.53□□□□□ -0.72
LINC00476-201ENST00000321517 PANO1I0J062 215 aa10.52□□□□□ -0.73
LINC00476-201ENST00000321517 TSPEAR-AS2P59090 65 aa10.52□□□□□ -0.73
LINC00476-201ENST00000321517 RPL18AQ02543 176 aaKnown RBP10.52□□□□□ -0.73
LINC00476-201ENST00000321517 ANKRD39Q53RE8 183 aa10.5□□□□□ -0.73
LINC00476-201ENST00000321517 C9orf116Q5BN46 136 aaPredicted RBP10.5□□□□□ -0.73
LINC00476-201ENST00000321517 MEIG1Q5JSS6 88 aa10.5□□□□□ -0.73
LINC00476-201ENST00000321517 Q6ZRP5 223 aa10.5□□□□□ -0.73
LINC00476-201ENST00000321517 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.5□□□□□ -0.73
LINC00476-201ENST00000321517 UBR4Q5T4S7 5183 aa10.5□□□□□ -0.73
LINC00476-201ENST00000321517 A0A096LNI7 61 aa10.49□□□□□ -0.73
LINC00476-201ENST00000321517 IGKV2D-26A0A0A0MRZ7 120 aa10.49□□□□□ -0.73
LINC00476-201ENST00000321517 ZNF815PA8K554 130 aa10.49□□□□□ -0.73
LINC00476-201ENST00000321517 OXTP01178 125 aa10.49□□□□□ -0.73
LINC00476-201ENST00000321517 GAGE2BQ13066 116 aa10.49□□□□□ -0.73
LINC00476-201ENST00000321517 SPACA4Q8TDM5 124 aa10.49□□□□□ -0.73
LINC00476-201ENST00000321517 TIMM17BO60830 172 aa10.48□□□□□ -0.73
LINC00476-201ENST00000321517 LINC00158P58513 81 aa10.48□□□□□ -0.73
LINC00476-201ENST00000321517 PYY3Q5JQD4 70 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms