RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 UBE2D1P51668 147 aa9.73□□□□□ -0.85
FOXR1-201ENST00000317011 C7orf33Q8WU49 177 aa9.73□□□□□ -0.85
FOXR1-201ENST00000317011 LINC00526Q96FQ7 95 aa9.73□□□□□ -0.85
FOXR1-201ENST00000317011 IGKV2-24A0A0C4DH68 120 aa9.72□□□□□ -0.85
FOXR1-201ENST00000317011 PACRGQ96M98 296 aaPredicted RBP9.72□□□□□ -0.85
FOXR1-201ENST00000317011 HIST1H2BLQ99880 126 aa9.72□□□□□ -0.85
FOXR1-201ENST00000317011 MAP1LC3CQ9BXW4 147 aa9.72□□□□□ -0.85
FOXR1-201ENST00000317011 A0A0J9YXV3 536 aa9.71□□□□□ -0.86
FOXR1-201ENST00000317011 SYCNQ0VAF6 134 aa9.71□□□□□ -0.86
FOXR1-201ENST00000317011 LINC00242Q5T6M2 205 aa9.71□□□□□ -0.86
FOXR1-201ENST00000317011 CARD19Q96LW7 228 aa9.71□□□□□ -0.86
FOXR1-201ENST00000317011 PLA2G2DQ9UNK4 145 aa9.71□□□□□ -0.86
FOXR1-201ENST00000317011 PKIGQ9Y2B9 76 aa9.71□□□□□ -0.86
FOXR1-201ENST00000317011 TRAV12-1A0A0B4J245 112 aa9.7□□□□□ -0.86
FOXR1-201ENST00000317011 ZNF561-AS1K7EIQ3 104 aa9.7□□□□□ -0.86
FOXR1-201ENST00000317011 KRTDAPP60985 99 aa9.7□□□□□ -0.86
FOXR1-201ENST00000317011 PRR3P79522 188 aaKnown RBP9.7□□□□□ -0.86
FOXR1-201ENST00000317011 CHTOPQ9Y3Y2 248 aaKnown RBP9.7□□□□□ -0.86
FOXR1-201ENST00000317011 SRSF9Q13242 221 aaKnown RBP eCLIP9.69□□□□□ -0.86
FOXR1-201ENST00000317011 LINC01600Q96MT4 127 aa9.69□□□□□ -0.86
FOXR1-201ENST00000317011 IGLV4-69A0A075B6H9 119 aa9.68□□□□□ -0.86
FOXR1-201ENST00000317011 SYS1-DBNDD2H3BUS1 97 aa9.68□□□□□ -0.86
FOXR1-201ENST00000317011 C3orf79P0CE67 100 aa9.68□□□□□ -0.86
FOXR1-201ENST00000317011 GEMIN7Q9H840 131 aaKnown RBP9.68□□□□□ -0.86
FOXR1-201ENST00000317011 MRPL35Q9NZE8 188 aaKnown RBP9.68□□□□□ -0.86
FOXR1-201ENST00000317011 COX7A2LO14548 114 aa9.67□□□□□ -0.86
FOXR1-201ENST00000317011 PTTG1IPP53801 180 aa9.67□□□□□ -0.86
FOXR1-201ENST00000317011 HERVK_113P63121 156 aa9.67□□□□□ -0.86
FOXR1-201ENST00000317011 SEC11AP67812 179 aa9.67□□□□□ -0.86
FOXR1-201ENST00000317011 ODF1Q14990 250 aa9.67□□□□□ -0.86
FOXR1-201ENST00000317011 FAM19A3Q7Z5A8 133 aa9.67□□□□□ -0.86
FOXR1-201ENST00000317011 C2orf48Q96LS8 159 aa9.67□□□□□ -0.86
FOXR1-201ENST00000317011 PMCHL2Q9BQD1 86 aa9.67□□□□□ -0.86
FOXR1-201ENST00000317011 TINCRA0A1B0GVN0 87 aa9.66□□□□□ -0.86
FOXR1-201ENST00000317011 F8VRH5 84 aa9.66□□□□□ -0.86
FOXR1-201ENST00000317011 IGLC3P0DOY3 106 aa9.66□□□□□ -0.86
FOXR1-201ENST00000317011 C5orf38Q86SI9 138 aa9.66□□□□□ -0.86
FOXR1-201ENST00000317011 LINC00469Q8N7U9 141 aa9.66□□□□□ -0.86
FOXR1-201ENST00000317011 IGHV3OR16-9A0A0B4J2B5 98 aa9.65□□□□□ -0.86
FOXR1-201ENST00000317011 LOC107984640A0A0U1RRK4 108 aa9.65□□□□□ -0.86
FOXR1-201ENST00000317011 C11orf86A6NJI1 115 aa9.65□□□□□ -0.86
FOXR1-201ENST00000317011 MALP21145 153 aa9.65□□□□□ -0.86
FOXR1-201ENST00000317011 RNF151Q2KHN1 245 aa9.65□□□□□ -0.86
FOXR1-201ENST00000317011 PET117Q6UWS5 81 aa9.65□□□□□ -0.86
FOXR1-201ENST00000317011 A0A1W2PNN7 141 aa9.64□□□□□ -0.87
FOXR1-201ENST00000317011 KRTAP10-8P60410 259 aa9.64□□□□□ -0.87
FOXR1-201ENST00000317011 SPINK6Q6UWN8 80 aa9.64□□□□□ -0.87
FOXR1-201ENST00000317011 CDKN2A-AS1Q9UH64 79 aa9.64□□□□□ -0.87
FOXR1-201ENST00000317011 Q6ZRP5 223 aa9.63□□□□□ -0.87
FOXR1-201ENST00000317011 OR10D4PQ8NGN7 298 aa9.63□□□□□ -0.87
FOXR1-201ENST00000317011 IGLV5-45A0A087WSX0 123 aa9.62□□□□□ -0.87
FOXR1-201ENST00000317011 F8WDY8 70 aa9.62□□□□□ -0.87
FOXR1-201ENST00000317011 DPM2O94777 84 aa9.62□□□□□ -0.87
FOXR1-201ENST00000317011 APOMO95445 188 aa9.62□□□□□ -0.87
FOXR1-201ENST00000317011 ZNF22P17026 224 aaPredicted RBP9.62□□□□□ -0.87
FOXR1-201ENST00000317011 GAGE2BQ13066 116 aa9.62□□□□□ -0.87
FOXR1-201ENST00000317011 TMEM170BQ5T4T1 132 aa9.62□□□□□ -0.87
FOXR1-201ENST00000317011 LINC01545Q5VT33 79 aa9.62□□□□□ -0.87
FOXR1-201ENST00000317011 CAMK2N2Q96S95 79 aa9.62□□□□□ -0.87
FOXR1-201ENST00000317011 LRP2P98164 4655 aa9.61□□□□□ -0.87
FOXR1-201ENST00000317011 A0A087WZ39 114 aa9.61□□□□□ -0.87
FOXR1-201ENST00000317011 C20orf202A1L168 122 aa9.61□□□□□ -0.87
FOXR1-201ENST00000317011 SPINK8P0C7L1 97 aa9.61□□□□□ -0.87
FOXR1-201ENST00000317011 PLNP26678 52 aa9.61□□□□□ -0.87
FOXR1-201ENST00000317011 H3BRM9 83 aa9.6□□□□□ -0.87
FOXR1-201ENST00000317011 IGKCP01834 107 aa9.6□□□□□ -0.87
FOXR1-201ENST00000317011 ORAOV1Q8WV07 137 aa9.59□□□□□ -0.87
FOXR1-201ENST00000317011 SMIM1B2RUZ4 78 aa9.58□□□□□ -0.88
FOXR1-201ENST00000317011 SPAG11BQ08648 103 aa9.58□□□□□ -0.88
FOXR1-201ENST00000317011 C9orf116Q5BN46 136 aaPredicted RBP9.58□□□□□ -0.88
FOXR1-201ENST00000317011 TLX1NBP0CAT3 122 aa9.57□□□□□ -0.88
FOXR1-201ENST00000317011 KIAA0087Q14695 138 aa9.57□□□□□ -0.88
FOXR1-201ENST00000317011 ATOH7Q8N100 152 aa9.57□□□□□ -0.88
FOXR1-201ENST00000317011 LINC01561Q8N1V8 128 aa9.57□□□□□ -0.88
FOXR1-201ENST00000317011 TOMM7Q9P0U1 55 aa9.57□□□□□ -0.88
FOXR1-201ENST00000317011 TMEM223A0PJW6 202 aa9.56□□□□□ -0.88
FOXR1-201ENST00000317011 SCGB1D1O95968 90 aa9.56□□□□□ -0.88
FOXR1-201ENST00000317011 C10orf25Q5T742 122 aa9.56□□□□□ -0.88
FOXR1-201ENST00000317011 REG3GQ6UW15 175 aa9.56□□□□□ -0.88
FOXR1-201ENST00000317011 PSORS1C2Q9UIG4 136 aa9.55□□□□□ -0.88
FOXR1-201ENST00000317011 PRSS2P07478 247 aa9.54□□□□□ -0.88
FOXR1-201ENST00000317011 AKR1D1P51857 326 aa9.54□□□□□ -0.88
FOXR1-201ENST00000317011 UNQ6190/PRO20217Q6UXQ8 127 aa9.54□□□□□ -0.88
FOXR1-201ENST00000317011 IGLV5-39A0A0G2JS06 123 aa9.53□□□□□ -0.88
FOXR1-201ENST00000317011 NDUFA1O15239 70 aa9.53□□□□□ -0.88
FOXR1-201ENST00000317011 HERVK_113P61574 105 aa9.53□□□□□ -0.88
FOXR1-201ENST00000317011 COX7B2Q8TF08 81 aa9.53□□□□□ -0.88
FOXR1-201ENST00000317011 C6orf48Q9UBA6 75 aa9.53□□□□□ -0.88
FOXR1-201ENST00000317011 RPL18AQ02543 176 aaKnown RBP9.52□□□□□ -0.89
FOXR1-201ENST00000317011 PHF5AQ7RTV0 110 aaKnown RBP9.52□□□□□ -0.89
FOXR1-201ENST00000317011 Q8IZM0 81 aa9.52□□□□□ -0.89
FOXR1-201ENST00000317011 KRTAP7-1Q8IUC3 87 aa9.51□□□□□ -0.89
FOXR1-201ENST00000317011 JOSD1Q15040 202 aaPredicted RBP9.5□□□□□ -0.89
FOXR1-201ENST00000317011 C6orf226Q5I0X4 101 aa9.5□□□□□ -0.89
FOXR1-201ENST00000317011 C2orf82Q6UX34 121 aa9.5□□□□□ -0.89
FOXR1-201ENST00000317011 LEPROTO15243 131 aa9.49□□□□□ -0.89
FOXR1-201ENST00000317011 CKS1BP61024 79 aa9.49□□□□□ -0.89
FOXR1-201ENST00000317011 KRTAP11-1Q8IUC1 163 aa9.49□□□□□ -0.89
FOXR1-201ENST00000317011 TRBV30A0A0K0K1B3 111 aa9.48□□□□□ -0.89
FOXR1-201ENST00000317011 FAM168BA1KXE4 195 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms