RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 IGKCP01834 107 aa11.55□□□□□ -0.56
SSSCA1-201ENST00000309328 SDIM1Q6ZPB5 146 aa11.55□□□□□ -0.56
SSSCA1-201ENST00000309328 Q6ZRU5 148 aa11.55□□□□□ -0.56
SSSCA1-201ENST00000309328 HIST3H2BBQ8N257 126 aa11.55□□□□□ -0.56
SSSCA1-201ENST00000309328 HERVK_113P61574 105 aa11.54□□□□□ -0.56
SSSCA1-201ENST00000309328 LINC01545Q5VT33 79 aa11.54□□□□□ -0.56
SSSCA1-201ENST00000309328 Q6ZSA8 131 aa11.54□□□□□ -0.56
SSSCA1-201ENST00000309328 LOC107984640A0A0U1RRK4 108 aa11.53□□□□□ -0.56
SSSCA1-201ENST00000309328 TMEM223A0PJW6 202 aa11.53□□□□□ -0.56
SSSCA1-201ENST00000309328 C3orf79P0CE67 100 aa11.52□□□□□ -0.57
SSSCA1-201ENST00000309328 KRTDAPP60985 99 aa11.52□□□□□ -0.57
SSSCA1-201ENST00000309328 TLX1NBP0CAT3 122 aa11.51□□□□□ -0.57
SSSCA1-201ENST00000309328 LINC01620Q4KN68 170 aa11.51□□□□□ -0.57
SSSCA1-201ENST00000309328 HIST1H2BLQ99880 126 aa11.51□□□□□ -0.57
SSSCA1-201ENST00000309328 C5orf52A6NGY3 159 aa11.5□□□□□ -0.57
SSSCA1-201ENST00000309328 SNRPEP62304 92 aaKnown RBP11.5□□□□□ -0.57
SSSCA1-201ENST00000309328 UNQ6190/PRO20217Q6UXQ8 127 aa11.5□□□□□ -0.57
SSSCA1-201ENST00000309328 CIRBPQ14011 172 aaKnown RBP11.49□□□□□ -0.57
SSSCA1-201ENST00000309328 C2orf82Q6UX34 121 aa11.49□□□□□ -0.57
SSSCA1-201ENST00000309328 C6orf48Q9UBA6 75 aa11.49□□□□□ -0.57
SSSCA1-201ENST00000309328 C10orf25Q5T742 122 aa11.48□□□□□ -0.57
SSSCA1-201ENST00000309328 PLEKHB2Q96CS7 222 aa11.48□□□□□ -0.57
SSSCA1-201ENST00000309328 NDUFC2-KCTD14E9PQ53 114 aa11.47□□□□□ -0.57
SSSCA1-201ENST00000309328 PTTG1IPP53801 180 aa11.46□□□□□ -0.57
SSSCA1-201ENST00000309328 SPACA4Q8TDM5 124 aa11.46□□□□□ -0.57
SSSCA1-201ENST00000309328 PMCHL2Q9BQD1 86 aa11.46□□□□□ -0.57
SSSCA1-201ENST00000309328 LINC00587B1AMM8 73 aa11.45□□□□□ -0.58
SSSCA1-201ENST00000309328 LEPROTO15243 131 aa11.45□□□□□ -0.58
SSSCA1-201ENST00000309328 RPL18AQ02543 176 aaKnown RBP11.45□□□□□ -0.58
SSSCA1-201ENST00000309328 DNAH8Q96JB1 4490 aa11.45□□□□□ -0.58
SSSCA1-201ENST00000309328 NMUP48645 174 aa11.44□□□□□ -0.58
SSSCA1-201ENST00000309328 HERV-K104P63124 156 aa11.44□□□□□ -0.58
SSSCA1-201ENST00000309328 COX17Q14061 63 aa11.44□□□□□ -0.58
SSSCA1-201ENST00000309328 DPH3Q96FX2 82 aa11.44□□□□□ -0.58
SSSCA1-201ENST00000309328 FAM30AQ9NZY2 134 aa11.44□□□□□ -0.58
SSSCA1-201ENST00000309328 APOBP04114 4563 aaKnown RBP11.44□□□□□ -0.58
SSSCA1-201ENST00000309328 A0A096LNI7 61 aa11.43□□□□□ -0.58
SSSCA1-201ENST00000309328 XGP55808 180 aa11.43□□□□□ -0.58
SSSCA1-201ENST00000309328 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.43□□□□□ -0.58
SSSCA1-201ENST00000309328 IGKV2-24A0A0C4DH68 120 aa11.42□□□□□ -0.58
SSSCA1-201ENST00000309328 MYMXA0A1B0GTQ4 84 aa11.42□□□□□ -0.58
SSSCA1-201ENST00000309328 E9PLD3 99 aa11.42□□□□□ -0.58
SSSCA1-201ENST00000309328 GAGE2BQ13066 116 aa11.42□□□□□ -0.58
SSSCA1-201ENST00000309328 MAJINQ3KP22 176 aa11.42□□□□□ -0.58
SSSCA1-201ENST00000309328 ZNF625Q96I27 306 aaPredicted RBP11.42□□□□□ -0.58
SSSCA1-201ENST00000309328 J3QQQ9 107 aa11.41□□□□□ -0.58
SSSCA1-201ENST00000309328 LGALS3P17931 250 aaKnown RBP11.41□□□□□ -0.58
SSSCA1-201ENST00000309328 SCXQ7RTU7 201 aa11.41□□□□□ -0.58
SSSCA1-201ENST00000309328 NDUFA12Q9UI09 145 aa11.41□□□□□ -0.58
SSSCA1-201ENST00000309328 Q6ZRP5 223 aa11.4□□□□□ -0.58
SSSCA1-201ENST00000309328 CIRBP-AS1Q8TBR5 109 aa11.4□□□□□ -0.58
SSSCA1-201ENST00000309328 PLAC8Q9NZF1 115 aa11.4□□□□□ -0.58
SSSCA1-201ENST00000309328 CHTF8P0CG12 524 aa11.39□□□□□ -0.59
SSSCA1-201ENST00000309328 C9orf116Q5BN46 136 aaPredicted RBP11.39□□□□□ -0.59
SSSCA1-201ENST00000309328 A0A087WYN8 130 aa11.38□□□□□ -0.59
SSSCA1-201ENST00000309328 ERG28Q9UKR5 140 aa11.38□□□□□ -0.59
SSSCA1-201ENST00000309328 GAGE2EQ4V326 116 aa11.37□□□□□ -0.59
SSSCA1-201ENST00000309328 STPG4Q8N801 248 aa11.37□□□□□ -0.59
SSSCA1-201ENST00000309328 GAGE2DQ9UEU5 116 aa11.37□□□□□ -0.59
SSSCA1-201ENST00000309328 HSBP1L1C9JCN9 74 aa11.36□□□□□ -0.59
SSSCA1-201ENST00000309328 PANO1I0J062 215 aa11.36□□□□□ -0.59
SSSCA1-201ENST00000309328 HSPG2P98160 4391 aa11.35□□□□□ -0.59
SSSCA1-201ENST00000309328 RYR1P21817 5038 aa11.35□□□□□ -0.59
SSSCA1-201ENST00000309328 TMA7Q9Y2S6 64 aaKnown RBP11.35□□□□□ -0.59
SSSCA1-201ENST00000309328 KIAA1109Q2LD37 5005 aa11.34□□□□□ -0.59
SSSCA1-201ENST00000309328 EPM2AB3EWF7 344 aa11.34□□□□□ -0.59
SSSCA1-201ENST00000309328 SCGB1D1O95968 90 aa11.33□□□□□ -0.6
SSSCA1-201ENST00000309328 PFN2P35080 140 aa11.33□□□□□ -0.6
SSSCA1-201ENST00000309328 TSPEAR-AS2P59090 65 aa11.33□□□□□ -0.6
SSSCA1-201ENST00000309328 MEIG1Q5JSS6 88 aa11.33□□□□□ -0.6
SSSCA1-201ENST00000309328 LINC00158P58513 81 aa11.32□□□□□ -0.6
SSSCA1-201ENST00000309328 C7orf33Q8WU49 177 aa11.32□□□□□ -0.6
SSSCA1-201ENST00000309328 FAM229AH3BQW9 127 aa11.31□□□□□ -0.6
SSSCA1-201ENST00000309328 Q8N1X5 172 aa11.31□□□□□ -0.6
SSSCA1-201ENST00000309328 C9orf129Q5T035 196 aaKnown RBP11.3□□□□□ -0.6
SSSCA1-201ENST00000309328 ATOH7Q8N100 152 aa11.3□□□□□ -0.6
SSSCA1-201ENST00000309328 PLA2G2DQ9UNK4 145 aa11.3□□□□□ -0.6
SSSCA1-201ENST00000309328 HAMPP81172 84 aa11.29□□□□□ -0.6
SSSCA1-201ENST00000309328 XAGE1AQ9HD64 81 aa11.29□□□□□ -0.6
SSSCA1-201ENST00000309328 LINC00528Q8N1L1 170 aa11.28□□□□□ -0.6
SSSCA1-201ENST00000309328 SND1-IT1Q9HBX3 110 aa11.28□□□□□ -0.6
SSSCA1-201ENST00000309328 A0A1W2PNN7 141 aa11.27□□□□□ -0.61
SSSCA1-201ENST00000309328 ZNF815PA8K554 130 aa11.27□□□□□ -0.61
SSSCA1-201ENST00000309328 PLA2G1BP04054 148 aaKnown RBP11.27□□□□□ -0.61
SSSCA1-201ENST00000309328 SMIM13P0DJ93 91 aa11.27□□□□□ -0.61
SSSCA1-201ENST00000309328 TP73-AS1Q9UF72 201 aa11.27□□□□□ -0.61
SSSCA1-201ENST00000309328 IGKV2D-26A0A0A0MRZ7 120 aa11.26□□□□□ -0.61
SSSCA1-201ENST00000309328 TIMM17BO60830 172 aa11.26□□□□□ -0.61
SSSCA1-201ENST00000309328 RPL24P83731 157 aaKnown RBP11.26□□□□□ -0.61
SSSCA1-201ENST00000309328 JOSD1Q15040 202 aaPredicted RBP11.26□□□□□ -0.61
SSSCA1-201ENST00000309328 ANKRD39Q53RE8 183 aa11.26□□□□□ -0.61
SSSCA1-201ENST00000309328 HERC2O95714 4834 aa11.25□□□□□ -0.61
SSSCA1-201ENST00000309328 A0A0J9YXY3 114 aa11.25□□□□□ -0.61
SSSCA1-201ENST00000309328 SMR3BP02814 79 aaPredicted RBP11.25□□□□□ -0.61
SSSCA1-201ENST00000309328 LBHQ53QV2 105 aaPredicted RBP11.25□□□□□ -0.61
SSSCA1-201ENST00000309328 FAM19A5Q7Z5A7 132 aaPredicted RBP11.25□□□□□ -0.61
SSSCA1-201ENST00000309328 M0QXV9 152 aa11.24□□□□□ -0.61
SSSCA1-201ENST00000309328 MIR7-3HGQ8N6C7 128 aa11.24□□□□□ -0.61
SSSCA1-201ENST00000309328 IGLV5-37A0A075B6J1 123 aa11.23□□□□□ -0.61
SSSCA1-201ENST00000309328 FAM168BA1KXE4 195 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms