RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 DNAH6Q9C0G6 4158 aa3.7□□□□□ -1.82
VPS50-202ENST00000305866 VPS13DQ5THJ4 4388 aa3.7□□□□□ -1.82
VPS50-202ENST00000305866 ALMS1Q8TCU4 4167 aa3.69□□□□□ -1.82
VPS50-202ENST00000305866 A0A087WVE0 104 aa3.69□□□□□ -1.82
VPS50-202ENST00000305866 CCKP06307 115 aa3.69□□□□□ -1.82
VPS50-202ENST00000305866 PRSS2P07478 247 aa3.69□□□□□ -1.82
VPS50-202ENST00000305866 H0YGX0 51 aa3.69□□□□□ -1.82
VPS50-202ENST00000305866 H3BNG1 76 aa3.69□□□□□ -1.82
VPS50-202ENST00000305866 MIR7-3HGQ8N6C7 128 aa3.69□□□□□ -1.82
VPS50-202ENST00000305866 ANKRD17O75179 2603 aaKnown RBP3.69□□□□□ -1.82
VPS50-202ENST00000305866 LINC00959A0A1B0GUT2 108 aa3.69□□□□□ -1.82
VPS50-202ENST00000305866 PAX4O43316 350 aa3.69□□□□□ -1.82
VPS50-202ENST00000305866 WFDC11Q8NEX6 87 aa3.69□□□□□ -1.82
VPS50-202ENST00000305866 PRR34Q9NV39 138 aa3.69□□□□□ -1.82
VPS50-202ENST00000305866 PKD1L1Q8TDX9 2849 aa3.69□□□□□ -1.82
VPS50-202ENST00000305866 TRGV1A0A0A0MS02 117 aa3.68□□□□□ -1.82
VPS50-202ENST00000305866 XCL2Q9UBD3 114 aa3.68□□□□□ -1.82
VPS50-202ENST00000305866 TENM1Q9UKZ4 2725 aa3.68□□□□□ -1.82
VPS50-202ENST00000305866 ITPR3Q14573 2671 aa3.68□□□□□ -1.82
VPS50-202ENST00000305866 WFDC9Q8NEX5 89 aa3.68□□□□□ -1.82
VPS50-202ENST00000305866 C14orf132Q9NPU4 83 aa3.68□□□□□ -1.82
VPS50-202ENST00000305866 PKD1L2Q7Z442 2459 aa3.68□□□□□ -1.82
VPS50-202ENST00000305866 LOC110117498A0A087WWA1 95 aa3.68□□□□□ -1.82
VPS50-202ENST00000305866 A0A0J9YWU9 116 aa3.68□□□□□ -1.82
VPS50-202ENST00000305866 IGHV4-30-4P0DP06 118 aa3.68□□□□□ -1.82
VPS50-202ENST00000305866 Q1RN00 199 aa3.68□□□□□ -1.82
VPS50-202ENST00000305866 C9orf66Q5T8R8 295 aa3.68□□□□□ -1.82
VPS50-202ENST00000305866 Q6ZQT0 140 aa3.68□□□□□ -1.82
VPS50-202ENST00000305866 MAPK1IP1LQ8NDC0 245 aa3.68□□□□□ -1.82
VPS50-202ENST00000305866 MAP1BP46821 2468 aaKnown RBP3.67□□□□□ -1.82
VPS50-202ENST00000305866 F8WDY8 70 aa3.67□□□□□ -1.82
VPS50-202ENST00000305866 NCR3O14931 201 aa3.67□□□□□ -1.82
VPS50-202ENST00000305866 NOP10Q9NPE3 64 aaKnown RBP3.67□□□□□ -1.82
VPS50-202ENST00000305866 TRBV10-3A0A0K0K1G6 114 aa3.67□□□□□ -1.82
VPS50-202ENST00000305866 hADV29S1A0JD25 119 aa3.67□□□□□ -1.82
VPS50-202ENST00000305866 H7BZZ5 65 aa3.67□□□□□ -1.82
VPS50-202ENST00000305866 KRTAP26-1Q6PEX3 210 aa3.67□□□□□ -1.82
VPS50-202ENST00000305866 SERP2Q8N6R1 65 aa3.67□□□□□ -1.82
VPS50-202ENST00000305866 Q8N814 137 aa3.67□□□□□ -1.82
VPS50-202ENST00000305866 PRB1P04280 392 aa3.66□□□□□ -1.82
VPS50-202ENST00000305866 SND1-IT1Q9HBX3 110 aa3.66□□□□□ -1.82
VPS50-202ENST00000305866 TRBV7-6A0A0J9YX20 115 aa3.66□□□□□ -1.82
VPS50-202ENST00000305866 H3BQ85 93 aa3.66□□□□□ -1.82
VPS50-202ENST00000305866 C6orf223Q8N319 242 aa3.66□□□□□ -1.82
VPS50-202ENST00000305866 DNAH8Q96JB1 4490 aa3.66□□□□□ -1.82
VPS50-202ENST00000305866 TENM2Q9NT68 2774 aa3.66□□□□□ -1.82
VPS50-202ENST00000305866 ATOX1O00244 68 aa3.66□□□□□ -1.82
VPS50-202ENST00000305866 IGLV6-57P01721 117 aa3.66□□□□□ -1.82
VPS50-202ENST00000305866 INAFM2P0DMQ5 153 aa3.66□□□□□ -1.82
VPS50-202ENST00000305866 TPRP12270 2363 aaKnown RBP3.66□□□□□ -1.82
VPS50-202ENST00000305866 BCE1O60756 84 aa3.65□□□□□ -1.82
VPS50-202ENST00000305866 SLPIP03973 132 aa3.65□□□□□ -1.82
VPS50-202ENST00000305866 CD164L2Q6UWJ8 174 aa3.65□□□□□ -1.82
VPS50-202ENST00000305866 Q8NAQ8 132 aa3.65□□□□□ -1.82
VPS50-202ENST00000305866 LCE6AA0A183 80 aa3.65□□□□□ -1.82
VPS50-202ENST00000305866 TMEM258P61165 79 aa3.65□□□□□ -1.82
VPS50-202ENST00000305866 PRR3P79522 188 aaKnown RBP3.65□□□□□ -1.82
VPS50-202ENST00000305866 FP248Q71RG6 208 aaPredicted RBP3.65□□□□□ -1.82
VPS50-202ENST00000305866 PRO0255Q9UI72 69 aa3.65□□□□□ -1.82
VPS50-202ENST00000305866 USP17L23D6RBM5 183 aa3.65□□□□□ -1.83
VPS50-202ENST00000305866 Q8N3U1 123 aa3.65□□□□□ -1.83
VPS50-202ENST00000305866 WFDC10AQ9H1F0 79 aa3.65□□□□□ -1.83
VPS50-202ENST00000305866 TRAV13-1A0A0B4J241 112 aa3.64□□□□□ -1.83
VPS50-202ENST00000305866 TRBV7-4A0A0J9YYF1 115 aa3.64□□□□□ -1.83
VPS50-202ENST00000305866 KLKP1Q107X0 134 aa3.64□□□□□ -1.83
VPS50-202ENST00000305866 C9orf153Q5TBE3 101 aa3.64□□□□□ -1.83
VPS50-202ENST00000305866 FAM19A1Q7Z5A9 133 aa3.64□□□□□ -1.83
VPS50-202ENST00000305866 USP9YO00507 2555 aaPredicted RBP3.64□□□□□ -1.83
VPS50-202ENST00000305866 SPTA1P02549 2419 aa3.64□□□□□ -1.83
VPS50-202ENST00000305866 A0A0U1RRA0 63 aa3.64□□□□□ -1.83
VPS50-202ENST00000305866 DGAT2L7PQ6IED9 249 aa3.64□□□□□ -1.83
VPS50-202ENST00000305866 AKAP6Q13023 2319 aa3.64□□□□□ -1.83
VPS50-202ENST00000305866 J3KT08 172 aa3.64□□□□□ -1.83
VPS50-202ENST00000305866 MIFP14174 115 aa3.64□□□□□ -1.83
VPS50-202ENST00000305866 C4orf26Q17RF5 130 aa3.64□□□□□ -1.83
VPS50-202ENST00000305866 LINC00575Q6W349 94 aa3.64□□□□□ -1.83
VPS50-202ENST00000305866 PTPN13Q12923 2485 aa3.64□□□□□ -1.83
VPS50-202ENST00000305866 NDUFC2-KCTD14E9PQ53 114 aa3.63□□□□□ -1.83
VPS50-202ENST00000305866 UBE2L6O14933 153 aa3.63□□□□□ -1.83
VPS50-202ENST00000305866 LECT2O14960 151 aa3.63□□□□□ -1.83
VPS50-202ENST00000305866 GAGE2AQ6NT46 116 aa3.63□□□□□ -1.83
VPS50-202ENST00000305866 KMT2BQ9UMN6 2715 aaPredicted RBP3.63□□□□□ -1.83
VPS50-202ENST00000305866 ATP5EP2Q5VTU8 51 aa3.63□□□□□ -1.83
VPS50-202ENST00000305866 DNAH17Q9UFH2 4485 aa3.62□□□□□ -1.83
VPS50-202ENST00000305866 NCOR2Q9Y618 2525 aa3.62□□□□□ -1.83
VPS50-202ENST00000305866 IGKV3D-7A0A0C4DH55 119 aa3.62□□□□□ -1.83
VPS50-202ENST00000305866 C5orf47Q569G3 176 aa3.62□□□□□ -1.83
VPS50-202ENST00000305866 C10orf25Q5T742 122 aa3.62□□□□□ -1.83
VPS50-202ENST00000305866 LELP1Q5T871 98 aa3.62□□□□□ -1.83
VPS50-202ENST00000305866 RIF1Q5UIP0 2472 aaKnown RBP3.62□□□□□ -1.83
VPS50-202ENST00000305866 USP24Q9UPU5 2620 aa3.62□□□□□ -1.83
VPS50-202ENST00000305866 DNAH2Q9P225 4427 aa3.62□□□□□ -1.83
VPS50-202ENST00000305866 CRPP02741 224 aa3.62□□□□□ -1.83
VPS50-202ENST00000305866 DSCR8Q96T75 97 aa3.62□□□□□ -1.83
VPS50-202ENST00000305866 C11orf68Q9H3H3 251 aaKnown RBP3.62□□□□□ -1.83
VPS50-202ENST00000305866 CHD8Q9HCK8 2581 aa3.62□□□□□ -1.83
VPS50-202ENST00000305866 FBN3Q75N90 2809 aa3.62□□□□□ -1.83
VPS50-202ENST00000305866 TRAV10A0A0B4J240 114 aa3.62□□□□□ -1.83
VPS50-202ENST00000305866 TRGV4A0A0C4DH28 118 aa3.62□□□□□ -1.83
VPS50-202ENST00000305866 LINC01547P58512 204 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms