RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 TLX1NBP0CAT3 122 aa10.69□□□□□ -0.7
NDUFA3-201ENST00000303553 CXCL5P42830 114 aa10.69□□□□□ -0.7
NDUFA3-201ENST00000303553 C6orf48Q9UBA6 75 aa10.69□□□□□ -0.7
NDUFA3-201ENST00000303553 C10orf25Q5T742 122 aa10.68□□□□□ -0.7
NDUFA3-201ENST00000303553 COLCA2A8K830 154 aa10.67□□□□□ -0.7
NDUFA3-201ENST00000303553 SMIM1B2RUZ4 78 aa10.67□□□□□ -0.7
NDUFA3-201ENST00000303553 IGLC3P0DOY3 106 aa10.67□□□□□ -0.7
NDUFA3-201ENST00000303553 C2orf82Q6UX34 121 aa10.67□□□□□ -0.7
NDUFA3-201ENST00000303553 VPS13BQ7Z7G8 4022 aa10.66□□□□□ -0.7
NDUFA3-201ENST00000303553 F8VRH5 84 aa10.65□□□□□ -0.7
NDUFA3-201ENST00000303553 KRTAP10-4P60372 401 aaPredicted RBP10.65□□□□□ -0.7
NDUFA3-201ENST00000303553 NDUFC2-KCTD14E9PQ53 114 aa10.64□□□□□ -0.71
NDUFA3-201ENST00000303553 COX7B2Q8TF08 81 aa10.64□□□□□ -0.71
NDUFA3-201ENST00000303553 Q6ZRP5 223 aa10.63□□□□□ -0.71
NDUFA3-201ENST00000303553 IFI27L1Q96BM0 104 aa10.63□□□□□ -0.71
NDUFA3-201ENST00000303553 SPINK8P0C7L1 97 aa10.62□□□□□ -0.71
NDUFA3-201ENST00000303553 GAGE2EQ4V326 116 aa10.62□□□□□ -0.71
NDUFA3-201ENST00000303553 C9orf116Q5BN46 136 aaPredicted RBP10.62□□□□□ -0.71
NDUFA3-201ENST00000303553 GAGE2DQ9UEU5 116 aa10.62□□□□□ -0.71
NDUFA3-201ENST00000303553 TRAV12-1A0A0B4J245 112 aa10.61□□□□□ -0.71
NDUFA3-201ENST00000303553 SERF1AO75920 110 aa10.61□□□□□ -0.71
NDUFA3-201ENST00000303553 CHTOPQ9Y3Y2 248 aaKnown RBP10.61□□□□□ -0.71
NDUFA3-201ENST00000303553 ZNF22P17026 224 aaPredicted RBP10.6□□□□□ -0.71
NDUFA3-201ENST00000303553 FAM19A2Q8N3H0 131 aa10.6□□□□□ -0.71
NDUFA3-201ENST00000303553 A0A1W2PNN7 141 aa10.59□□□□□ -0.71
NDUFA3-201ENST00000303553 TMEM170BQ5T4T1 132 aa10.59□□□□□ -0.71
NDUFA3-201ENST00000303553 C11orf86A6NJI1 115 aa10.58□□□□□ -0.72
NDUFA3-201ENST00000303553 SCO1O75880 301 aa10.58□□□□□ -0.72
NDUFA3-201ENST00000303553 LEPROTL1O95214 131 aa10.58□□□□□ -0.72
NDUFA3-201ENST00000303553 PRR3P79522 188 aaKnown RBP10.58□□□□□ -0.72
NDUFA3-201ENST00000303553 SFTA2Q6UW10 78 aa10.58□□□□□ -0.72
NDUFA3-201ENST00000303553 IGLV5-39A0A0G2JS06 123 aa10.57□□□□□ -0.72
NDUFA3-201ENST00000303553 HSPB8Q9UJY1 196 aa10.57□□□□□ -0.72
NDUFA3-201ENST00000303553 FLG2Q5D862 2391 aaPredicted RBP10.56□□□□□ -0.72
NDUFA3-201ENST00000303553 LINC00310P59036 64 aa10.55□□□□□ -0.72
NDUFA3-201ENST00000303553 FAM19A5Q7Z5A7 132 aaPredicted RBP10.55□□□□□ -0.72
NDUFA3-201ENST00000303553 FAM168BA1KXE4 195 aa10.53□□□□□ -0.72
NDUFA3-201ENST00000303553 KRTAP29-1A8MX34 341 aaPredicted RBP10.53□□□□□ -0.72
NDUFA3-201ENST00000303553 J3QL48 77 aa10.53□□□□□ -0.72
NDUFA3-201ENST00000303553 C9orf129Q5T035 196 aaKnown RBP10.53□□□□□ -0.72
NDUFA3-201ENST00000303553 H0Y8G0 127 aa10.52□□□□□ -0.73
NDUFA3-201ENST00000303553 M0QXV9 152 aa10.52□□□□□ -0.73
NDUFA3-201ENST00000303553 HIST1H2BKO60814 126 aa10.52□□□□□ -0.73
NDUFA3-201ENST00000303553 OXTP01178 125 aa10.52□□□□□ -0.73
NDUFA3-201ENST00000303553 HIST1H2BJP06899 126 aa10.52□□□□□ -0.73
NDUFA3-201ENST00000303553 HIST1H2BOP23527 126 aa10.52□□□□□ -0.73
NDUFA3-201ENST00000303553 HIST1H2BBP33778 126 aa10.52□□□□□ -0.73
NDUFA3-201ENST00000303553 HNRNPA3P51991 378 aaKnown RBP10.52□□□□□ -0.73
NDUFA3-201ENST00000303553 HIST1H2BDP58876 126 aa10.52□□□□□ -0.73
NDUFA3-201ENST00000303553 HIST1H2BCP62807 126 aa10.52□□□□□ -0.73
NDUFA3-201ENST00000303553 HIST2H2BEQ16778 126 aa10.52□□□□□ -0.73
NDUFA3-201ENST00000303553 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.52□□□□□ -0.73
NDUFA3-201ENST00000303553 PHF5AQ7RTV0 110 aaKnown RBP10.52□□□□□ -0.73
NDUFA3-201ENST00000303553 HIST1H2BHQ93079 126 aa10.52□□□□□ -0.73
NDUFA3-201ENST00000303553 HIST1H2BNQ99877 126 aa10.52□□□□□ -0.73
NDUFA3-201ENST00000303553 HIST1H2BMQ99879 126 aa10.52□□□□□ -0.73
NDUFA3-201ENST00000303553 TMEM223A0PJW6 202 aa10.51□□□□□ -0.73
NDUFA3-201ENST00000303553 FABP4P15090 132 aa10.5□□□□□ -0.73
NDUFA3-201ENST00000303553 PLNP26678 52 aa10.5□□□□□ -0.73
NDUFA3-201ENST00000303553 COX17Q14061 63 aa10.5□□□□□ -0.73
NDUFA3-201ENST00000303553 ODF1Q14990 250 aa10.5□□□□□ -0.73
NDUFA3-201ENST00000303553 XAGE1AQ9HD64 81 aa10.5□□□□□ -0.73
NDUFA3-201ENST00000303553 MYCBP2O75592 4640 aa10.5□□□□□ -0.73
NDUFA3-201ENST00000303553 DMBT1Q9UGM3 2413 aaPredicted RBP10.49□□□□□ -0.73
NDUFA3-201ENST00000303553 NUPR1O60356 82 aa10.49□□□□□ -0.73
NDUFA3-201ENST00000303553 S100A1P23297 94 aa10.49□□□□□ -0.73
NDUFA3-201ENST00000303553 UBE2BP63146 152 aa10.49□□□□□ -0.73
NDUFA3-201ENST00000303553 MAP1LC3CQ9BXW4 147 aa10.49□□□□□ -0.73
NDUFA3-201ENST00000303553 PSORS1C2Q9UIG4 136 aa10.48□□□□□ -0.73
NDUFA3-201ENST00000303553 ERG28Q9UKR5 140 aa10.48□□□□□ -0.73
NDUFA3-201ENST00000303553 LBHQ53QV2 105 aaPredicted RBP10.47□□□□□ -0.73
NDUFA3-201ENST00000303553 SPINK6Q6UWN8 80 aa10.47□□□□□ -0.73
NDUFA3-201ENST00000303553 DPM2O94777 84 aa10.46□□□□□ -0.73
NDUFA3-201ENST00000303553 PFN2P35080 140 aa10.46□□□□□ -0.73
NDUFA3-201ENST00000303553 C1orf137Q5JT78 98 aa10.46□□□□□ -0.73
NDUFA3-201ENST00000303553 ZNF625Q96I27 306 aaPredicted RBP10.46□□□□□ -0.73
NDUFA3-201ENST00000303553 TP73-AS1Q9UF72 201 aa10.46□□□□□ -0.73
NDUFA3-201ENST00000303553 SERTAD4-AS1Q5TG53 156 aa10.45□□□□□ -0.74
NDUFA3-201ENST00000303553 KRTAP7-1Q8IUC3 87 aa10.45□□□□□ -0.74
NDUFA3-201ENST00000303553 PLA2G2DQ9UNK4 145 aa10.45□□□□□ -0.74
NDUFA3-201ENST00000303553 HERVK_113P61574 105 aa10.44□□□□□ -0.74
NDUFA3-201ENST00000303553 C22orf24Q9Y442 160 aa10.44□□□□□ -0.74
NDUFA3-201ENST00000303553 IGKCP01834 107 aa10.43□□□□□ -0.74
NDUFA3-201ENST00000303553 HERV-K104P63124 156 aa10.43□□□□□ -0.74
NDUFA3-201ENST00000303553 REG3GQ6UW15 175 aa10.43□□□□□ -0.74
NDUFA3-201ENST00000303553 MRPL55Q7Z7F7 128 aaKnown RBP10.43□□□□□ -0.74
NDUFA3-201ENST00000303553 LINC00587B1AMM8 73 aa10.42□□□□□ -0.74
NDUFA3-201ENST00000303553 NKAPP1Q8N9T2 125 aa10.42□□□□□ -0.74
NDUFA3-201ENST00000303553 COA6Q5JTJ3 125 aaKnown RBP10.41□□□□□ -0.74
NDUFA3-201ENST00000303553 PLEKHB2Q96CS7 222 aa10.41□□□□□ -0.74
NDUFA3-201ENST00000303553 IGLV5-37A0A075B6J1 123 aa10.4□□□□□ -0.74
NDUFA3-201ENST00000303553 MYMXA0A1B0GTQ4 84 aa10.4□□□□□ -0.74
NDUFA3-201ENST00000303553 ATP6V1G1O75348 118 aa10.4□□□□□ -0.74
NDUFA3-201ENST00000303553 IGLV7-43P04211 117 aa10.4□□□□□ -0.74
NDUFA3-201ENST00000303553 SRSF9Q13242 221 aaKnown RBP eCLIP10.4□□□□□ -0.74
NDUFA3-201ENST00000303553 SND1-IT1Q9HBX3 110 aa10.4□□□□□ -0.74
NDUFA3-201ENST00000303553 SYS1-DBNDD2H3BUS1 97 aa10.39□□□□□ -0.75
NDUFA3-201ENST00000303553 LEPROTO15243 131 aa10.39□□□□□ -0.75
NDUFA3-201ENST00000303553 LINC00158P58513 81 aa10.39□□□□□ -0.75
NDUFA3-201ENST00000303553 RPL24P83731 157 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms