RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 CD164L2Q6UWJ8 174 aa8.59□□□□□ -1.03
SHROOM3-201ENST00000296043 LY6LH3BQJ8 138 aa8.59□□□□□ -1.03
SHROOM3-201ENST00000296043 COX17Q14061 63 aa8.58□□□□□ -1.04
SHROOM3-201ENST00000296043 COX6A2Q02221 97 aa8.58□□□□□ -1.04
SHROOM3-201ENST00000296043 CRIP3Q6Q6R5 217 aa8.58□□□□□ -1.04
SHROOM3-201ENST00000296043 LINC00575Q6W349 94 aa8.58□□□□□ -1.04
SHROOM3-201ENST00000296043 FASNP49327 2511 aaKnown RBP8.58□□□□□ -1.04
SHROOM3-201ENST00000296043 IGLV1-47P01700 117 aa8.57□□□□□ -1.04
SHROOM3-201ENST00000296043 A6NDX4 124 aa8.57□□□□□ -1.04
SHROOM3-201ENST00000296043 THSD7BQ9C0I4 1608 aa8.57□□□□□ -1.04
SHROOM3-201ENST00000296043 SMCPP49901 116 aaPredicted RBP8.57□□□□□ -1.04
SHROOM3-201ENST00000296043 POLR2KP53803 58 aaKnown RBP8.57□□□□□ -1.04
SHROOM3-201ENST00000296043 SMIM29Q86T20 159 aa8.57□□□□□ -1.04
SHROOM3-201ENST00000296043 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.56□□□□□ -1.04
SHROOM3-201ENST00000296043 LINC00959A0A1B0GUT2 108 aa8.56□□□□□ -1.04
SHROOM3-201ENST00000296043 A8MTW9 85 aa8.56□□□□□ -1.04
SHROOM3-201ENST00000296043 PRO0461Q9UI25 63 aa8.56□□□□□ -1.04
SHROOM3-201ENST00000296043 CEP295Q9C0D2 2601 aa8.55□□□□□ -1.04
SHROOM3-201ENST00000296043 COL27A1Q8IZC6 1860 aaPredicted RBP8.55□□□□□ -1.04
SHROOM3-201ENST00000296043 LINC00242Q5T6M2 205 aa8.54□□□□□ -1.04
SHROOM3-201ENST00000296043 F8WDY8 70 aa8.54□□□□□ -1.04
SHROOM3-201ENST00000296043 A0A096LNJ9 63 aa8.54□□□□□ -1.04
SHROOM3-201ENST00000296043 hDV103S1A0JD37 113 aa8.54□□□□□ -1.04
SHROOM3-201ENST00000296043 ATP11AUNQ6ZP68 121 aa8.54□□□□□ -1.04
SHROOM3-201ENST00000296043 A0A1B0GU69 56 aa8.53□□□□□ -1.04
SHROOM3-201ENST00000296043 Q8IZM0 81 aa8.53□□□□□ -1.04
SHROOM3-201ENST00000296043 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.53□□□□□ -1.04
SHROOM3-201ENST00000296043 IGLV8-61A0A075B6I0 122 aa8.53□□□□□ -1.04
SHROOM3-201ENST00000296043 K7EQG2 157 aa8.53□□□□□ -1.04
SHROOM3-201ENST00000296043 CD164Q04900 197 aa8.53□□□□□ -1.04
SHROOM3-201ENST00000296043 PRLHP81277 87 aa8.52□□□□□ -1.04
SHROOM3-201ENST00000296043 CNFNQ9BYD5 112 aa8.52□□□□□ -1.05
SHROOM3-201ENST00000296043 SMIM1B2RUZ4 78 aa8.52□□□□□ -1.05
SHROOM3-201ENST00000296043 BBC3Q96PG8 261 aaPredicted RBP8.51□□□□□ -1.05
SHROOM3-201ENST00000296043 LINC00336Q6ZUF6 198 aa8.51□□□□□ -1.05
SHROOM3-201ENST00000296043 MUC7Q8TAX7 377 aa8.51□□□□□ -1.05
SHROOM3-201ENST00000296043 UNQ6190/PRO20217Q6UXQ8 127 aa8.51□□□□□ -1.05
SHROOM3-201ENST00000296043 TRAV10A0A0B4J240 114 aa8.5□□□□□ -1.05
SHROOM3-201ENST00000296043 CYSRT1A8MQ03 144 aa8.5□□□□□ -1.05
SHROOM3-201ENST00000296043 FHL2Q14192 279 aa8.5□□□□□ -1.05
SHROOM3-201ENST00000296043 MSMPQ1L6U9 139 aa8.5□□□□□ -1.05
SHROOM3-201ENST00000296043 IGFL3Q6UXB1 125 aa8.5□□□□□ -1.05
SHROOM3-201ENST00000296043 CDC42SE2Q9NRR3 84 aa8.5□□□□□ -1.05
SHROOM3-201ENST00000296043 LINC00337Q8N6G1 96 aa8.5□□□□□ -1.05
SHROOM3-201ENST00000296043 LINC00474Q9P2X8 69 aa8.5□□□□□ -1.05
SHROOM3-201ENST00000296043 FSHBP01225 129 aa8.49□□□□□ -1.05
SHROOM3-201ENST00000296043 BPTFQ12830 3046 aa8.49□□□□□ -1.05
SHROOM3-201ENST00000296043 ODF3BA8MYP8 253 aa8.49□□□□□ -1.05
SHROOM3-201ENST00000296043 LINC00574Q9H8X3 128 aa8.48□□□□□ -1.05
SHROOM3-201ENST00000296043 PLA2G1BP04054 148 aaKnown RBP8.48□□□□□ -1.05
SHROOM3-201ENST00000296043 C11orf45Q8TAV5 145 aa8.48□□□□□ -1.05
SHROOM3-201ENST00000296043 TM2D3Q9BRN9 247 aa8.47□□□□□ -1.05
SHROOM3-201ENST00000296043 KLLNB2CW77 178 aa8.47□□□□□ -1.05
SHROOM3-201ENST00000296043 A0A087WSZ3 146 aa8.47□□□□□ -1.05
SHROOM3-201ENST00000296043 SSBP3-AS1Q7Z2R9 100 aa8.46□□□□□ -1.06
SHROOM3-201ENST00000296043 Q9BRP9 147 aa8.46□□□□□ -1.06
SHROOM3-201ENST00000296043 C7orf65Q6ZTY9 151 aa8.46□□□□□ -1.06
SHROOM3-201ENST00000296043 EPG5Q9HCE0 2579 aa8.46□□□□□ -1.06
SHROOM3-201ENST00000296043 CIRBP-AS1Q8TBR5 109 aa8.46□□□□□ -1.06
SHROOM3-201ENST00000296043 CHCHD7Q9BUK0 85 aa8.46□□□□□ -1.06
SHROOM3-201ENST00000296043 DEFB114Q30KQ6 69 aa8.45□□□□□ -1.06
SHROOM3-201ENST00000296043 KPRPQ5T749 579 aaPredicted RBP8.45□□□□□ -1.06
SHROOM3-201ENST00000296043 SMCR5Q8TEV8 140 aa8.45□□□□□ -1.06
SHROOM3-201ENST00000296043 IGF2-ASQ6U949 168 aa8.45□□□□□ -1.06
SHROOM3-201ENST00000296043 REG3GQ6UW15 175 aa8.44□□□□□ -1.06
SHROOM3-201ENST00000296043 C6orf223Q8N319 242 aa8.44□□□□□ -1.06
SHROOM3-201ENST00000296043 IGKV2D-30A0A075B6S6 120 aa8.44□□□□□ -1.06
SHROOM3-201ENST00000296043 IGKV2-30P06310 120 aa8.44□□□□□ -1.06
SHROOM3-201ENST00000296043 A8MUN3 132 aa8.44□□□□□ -1.06
SHROOM3-201ENST00000296043 FAM218AQ96MZ4 157 aa8.44□□□□□ -1.06
SHROOM3-201ENST00000296043 SPATA3Q8NHX4 192 aa8.43□□□□□ -1.06
SHROOM3-201ENST00000296043 DEFB131BA0A096LNP1 70 aa8.43□□□□□ -1.06
SHROOM3-201ENST00000296043 H3BS24 57 aa8.43□□□□□ -1.06
SHROOM3-201ENST00000296043 KTN1-AS1Q86SY8 53 aa8.43□□□□□ -1.06
SHROOM3-201ENST00000296043 AMELXQ99217 191 aa8.43□□□□□ -1.06
SHROOM3-201ENST00000296043 C10orf99Q6UWK7 81 aa8.43□□□□□ -1.06
SHROOM3-201ENST00000296043 IGLV2-18A0A075B6J9 118 aa8.42□□□□□ -1.06
SHROOM3-201ENST00000296043 NHLRC4P0CG21 123 aaPredicted RBP8.42□□□□□ -1.06
SHROOM3-201ENST00000296043 FSTL3O95633 263 aa8.42□□□□□ -1.06
SHROOM3-201ENST00000296043 C6orf48Q9UBA6 75 aa8.42□□□□□ -1.06
SHROOM3-201ENST00000296043 FHL3Q13643 280 aa8.41□□□□□ -1.06
SHROOM3-201ENST00000296043 Q6ZTC4 211 aa8.41□□□□□ -1.06
SHROOM3-201ENST00000296043 C2orf48Q96LS8 159 aa8.4□□□□□ -1.06
SHROOM3-201ENST00000296043 LELP1Q5T871 98 aa8.4□□□□□ -1.07
SHROOM3-201ENST00000296043 AKAP13Q12802 2813 aa8.4□□□□□ -1.07
SHROOM3-201ENST00000296043 LINC00482Q8N8I6 264 aa8.39□□□□□ -1.07
SHROOM3-201ENST00000296043 C7orf33Q8WU49 177 aa8.39□□□□□ -1.07
SHROOM3-201ENST00000296043 PSMG3-AS1Q96PY0 264 aa8.38□□□□□ -1.07
SHROOM3-201ENST00000296043 IGLV4-60A0A075B6I1 120 aa8.38□□□□□ -1.07
SHROOM3-201ENST00000296043 ACYP2P14621 99 aa8.37□□□□□ -1.07
SHROOM3-201ENST00000296043 Q8N2B8 174 aa8.37□□□□□ -1.07
SHROOM3-201ENST00000296043 C19orf84I3L1E1 186 aa8.36□□□□□ -1.07
SHROOM3-201ENST00000296043 EGFEM1PQ0D2K5 195 aa8.35□□□□□ -1.07
SHROOM3-201ENST00000296043 Q6ZSN1 163 aa8.35□□□□□ -1.07
SHROOM3-201ENST00000296043 BCE1O60756 84 aa8.34□□□□□ -1.07
SHROOM3-201ENST00000296043 LINC01006Q8NI28 216 aa8.34□□□□□ -1.07
SHROOM3-201ENST00000296043 KIAA0087Q14695 138 aa8.33□□□□□ -1.08
SHROOM3-201ENST00000296043 C18orf65Q6ZTR6 163 aa8.33□□□□□ -1.08
SHROOM3-201ENST00000296043 WISP2O76076 250 aa8.33□□□□□ -1.08
SHROOM3-201ENST00000296043 DEFB113Q30KQ7 82 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms