RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 CSAG1Q6PB30 78 aa6.24□□□□□ -1.41
CTDSPL-201ENST00000273179 COL6A6A6NMZ7 2263 aa6.24□□□□□ -1.41
CTDSPL-201ENST00000273179 IGHV3OR16-12A0A075B7B8 117 aa6.24□□□□□ -1.41
CTDSPL-201ENST00000273179 IGKV2-40A0A087WW87 121 aaPredicted RBP6.24□□□□□ -1.41
CTDSPL-201ENST00000273179 A0A0J9YX75 114 aa6.24□□□□□ -1.41
CTDSPL-201ENST00000273179 IGKV2D-40P01614 121 aaPredicted RBP6.24□□□□□ -1.41
CTDSPL-201ENST00000273179 Q8TAT8 98 aa6.23□□□□□ -1.41
CTDSPL-201ENST00000273179 DNAJC9-AS1A6NH13 148 aa6.23□□□□□ -1.41
CTDSPL-201ENST00000273179 LYNX1G3V0Z9 82 aa6.23□□□□□ -1.41
CTDSPL-201ENST00000273179 LYNX1P0DP58 116 aa6.23□□□□□ -1.41
CTDSPL-201ENST00000273179 C7orf69Q9H7B7 122 aa6.23□□□□□ -1.41
CTDSPL-201ENST00000273179 ZFHX3Q15911 3703 aa6.23□□□□□ -1.41
CTDSPL-201ENST00000273179 USF3Q68DE3 2245 aa6.23□□□□□ -1.41
CTDSPL-201ENST00000273179 TRBV6-1A0A0K0K1D8 114 aa6.23□□□□□ -1.41
CTDSPL-201ENST00000273179 C18orf65Q6ZTR6 163 aa6.23□□□□□ -1.41
CTDSPL-201ENST00000273179 CAMK2N2Q96S95 79 aa6.23□□□□□ -1.41
CTDSPL-201ENST00000273179 TRBV7-4A0A0J9YYF1 115 aa6.23□□□□□ -1.41
CTDSPL-201ENST00000273179 LINC00308Q8TCZ7 52 aa6.23□□□□□ -1.41
CTDSPL-201ENST00000273179 A0A1B0GW54 56 aa6.22□□□□□ -1.41
CTDSPL-201ENST00000273179 COX7B2Q8TF08 81 aa6.22□□□□□ -1.41
CTDSPL-201ENST00000273179 LINC00467Q9BRT7 94 aa6.22□□□□□ -1.41
CTDSPL-201ENST00000273179 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.22□□□□□ -1.413e-6■■□□□ 13.8
CTDSPL-201ENST00000273179 WNK2Q9Y3S1 2297 aa6.22□□□□□ -1.41
CTDSPL-201ENST00000273179 MSMBP08118 114 aa6.22□□□□□ -1.41
CTDSPL-201ENST00000273179 Q6ZTC4 211 aa6.22□□□□□ -1.41
CTDSPL-201ENST00000273179 SPTBN1Q01082 2364 aaKnown RBP6.21□□□□□ -1.41
CTDSPL-201ENST00000273179 WT1-ASQ06250 92 aa6.21□□□□□ -1.41
CTDSPL-201ENST00000273179 IGHV3-49A0A0A0MS15 119 aa6.21□□□□□ -1.42
CTDSPL-201ENST00000273179 CGB3P0DN86 165 aa6.21□□□□□ -1.42
CTDSPL-201ENST00000273179 CGB7P0DN87 165 aa6.21□□□□□ -1.42
CTDSPL-201ENST00000273179 ADM2Q7Z4H4 148 aa6.21□□□□□ -1.42
CTDSPL-201ENST00000273179 RPL39P62891 51 aaKnown RBP6.21□□□□□ -1.42
CTDSPL-201ENST00000273179 ZNRD1Q9P1U0 126 aa6.2□□□□□ -1.42
CTDSPL-201ENST00000273179 PTPRQQ9UMZ3 2332 aa6.2□□□□□ -1.42
CTDSPL-201ENST00000273179 CCL19Q99731 98 aa6.2□□□□□ -1.42
CTDSPL-201ENST00000273179 CELSR1Q9NYQ6 3014 aa6.2□□□□□ -1.42
CTDSPL-201ENST00000273179 C11orf71Q6IPW1 123 aa6.19□□□□□ -1.42
CTDSPL-201ENST00000273179 RPL39LQ96EH5 51 aaKnown RBP6.19□□□□□ -1.42
CTDSPL-201ENST00000273179 Q8N7P7 452 aa6.19□□□□□ -1.42
CTDSPL-201ENST00000273179 DSCAMO60469 2012 aa6.19□□□□□ -1.42
CTDSPL-201ENST00000273179 CSMD2Q7Z408 3487 aa6.18□□□□□ -1.42
CTDSPL-201ENST00000273179 GAS8-AS1O95177 125 aa6.18□□□□□ -1.42
CTDSPL-201ENST00000273179 S4R3C0 116 aa6.18□□□□□ -1.42
CTDSPL-201ENST00000273179 IGHV3-74A0A0B4J1X5 117 aa6.18□□□□□ -1.42
CTDSPL-201ENST00000273179 BRWD1-AS2P59051 145 aa6.18□□□□□ -1.42
CTDSPL-201ENST00000273179 Q6ZQT0 140 aa6.17□□□□□ -1.42
CTDSPL-201ENST00000273179 IGHV3-35A0A0C4DH35 117 aa6.17□□□□□ -1.42
CTDSPL-201ENST00000273179 IGIPA6NJ69 53 aa6.17□□□□□ -1.42
CTDSPL-201ENST00000273179 IGHV3-23P01764 117 aa6.17□□□□□ -1.42
CTDSPL-201ENST00000273179 A0A087WYN8 130 aa6.17□□□□□ -1.42
CTDSPL-201ENST00000273179 IGHV7-81A0A0B4J1V7 117 aa6.17□□□□□ -1.42
CTDSPL-201ENST00000273179 DSCR9P59020 149 aa6.17□□□□□ -1.42
CTDSPL-201ENST00000273179 Q8N9P0 234 aaPredicted RBP6.17□□□□□ -1.42
CTDSPL-201ENST00000273179 ABCA1O95477 2261 aa6.16□□□□□ -1.42
CTDSPL-201ENST00000273179 Q6ZTI0 123 aa6.16□□□□□ -1.42
CTDSPL-201ENST00000273179 CDC42SE2Q9NRR3 84 aa6.16□□□□□ -1.42
CTDSPL-201ENST00000273179 H3BRN7 92 aa6.16□□□□□ -1.42
CTDSPL-201ENST00000273179 ETDCA0A1B0GVM5 59 aa6.16□□□□□ -1.42
CTDSPL-201ENST00000273179 IGKV3-7A0A075B6H7 116 aa6.15□□□□□ -1.42
CTDSPL-201ENST00000273179 IGHV4-30-2A0A087WSY4 118 aa6.15□□□□□ -1.42
CTDSPL-201ENST00000273179 IGLV2-11P01706 119 aa6.15□□□□□ -1.42
CTDSPL-201ENST00000273179 IGLV4-69A0A075B6H9 119 aa6.15□□□□□ -1.42
CTDSPL-201ENST00000273179 LY6EQ16553 131 aa6.15□□□□□ -1.42
CTDSPL-201ENST00000273179 ELOF1P60002 83 aaKnown RBP6.15□□□□□ -1.43
CTDSPL-201ENST00000273179 CRYBG3Q68DQ2 2970 aa6.15□□□□□ -1.43
CTDSPL-201ENST00000273179 NTM-AS1Q6ZSK4 140 aa6.15□□□□□ -1.43
CTDSPL-201ENST00000273179 USMG5Q96IX5 58 aa6.15□□□□□ -1.43
CTDSPL-201ENST00000273179 DHRS4-AS1Q9P1J3 65 aa6.15□□□□□ -1.43
CTDSPL-201ENST00000273179 ITPR1Q14643 2758 aa6.14□□□□□ -1.43
CTDSPL-201ENST00000273179 A6NDX4 124 aa6.14□□□□□ -1.43
CTDSPL-201ENST00000273179 H0Y9P7 68 aa6.14□□□□□ -1.43
CTDSPL-201ENST00000273179 ASB16-AS1Q495Z4 193 aa6.14□□□□□ -1.43
CTDSPL-201ENST00000273179 Q8N9W7 124 aa6.14□□□□□ -1.43
CTDSPL-201ENST00000273179 IGLV1-47P01700 117 aa6.14□□□□□ -1.43
CTDSPL-201ENST00000273179 IGHV4-61A0A0C4DH41 118 aa6.13□□□□□ -1.43
CTDSPL-201ENST00000273179 IGHV4-59P01825 116 aa6.13□□□□□ -1.43
CTDSPL-201ENST00000273179 PLA2G2AP14555 144 aa6.13□□□□□ -1.43
CTDSPL-201ENST00000273179 ROMO1P60602 79 aa6.13□□□□□ -1.43
CTDSPL-201ENST00000273179 C8orf17Q9NRJ1 99 aa6.13□□□□□ -1.43
CTDSPL-201ENST00000273179 IGLV2-23P01705 113 aa6.13□□□□□ -1.43
CTDSPL-201ENST00000273179 NPBQ8NG41 125 aa6.13□□□□□ -1.43
CTDSPL-201ENST00000273179 PRRC2AP48634 2157 aaKnown RBP6.13□□□□□ -1.43
CTDSPL-201ENST00000273179 A8MWP4 228 aa6.13□□□□□ -1.43
CTDSPL-201ENST00000273179 IGHV4-30-4P0DP06 118 aa6.13□□□□□ -1.43
CTDSPL-201ENST00000273179 SMIM11BQ8TCY0 68 aa6.13□□□□□ -1.43
CTDSPL-201ENST00000273179 C11orf21Q9P2W6 132 aa6.13□□□□□ -1.43
CTDSPL-201ENST00000273179 UTP20O75691 2785 aaKnown RBP6.13□□□□□ -1.43
CTDSPL-201ENST00000273179 IGHV4-28A0A0C4DH34 117 aa6.13□□□□□ -1.43
CTDSPL-201ENST00000273179 H3BQ85 93 aa6.13□□□□□ -1.43
CTDSPL-201ENST00000273179 CACNA1BQ00975 2339 aa6.12□□□□□ -1.43
CTDSPL-201ENST00000273179 HRNRQ86YZ3 2850 aaPredicted RBP6.12□□□□□ -1.43
CTDSPL-201ENST00000273179 IGHV3-66A0A0C4DH42 116 aa6.12□□□□□ -1.43
CTDSPL-201ENST00000273179 Q8NAQ8 132 aa6.12□□□□□ -1.43
CTDSPL-201ENST00000273179 IGKV1OR2-108A0A075B7D4 117 aa6.12□□□□□ -1.43
CTDSPL-201ENST00000273179 TRGV2A0A075B6R0 118 aa6.12□□□□□ -1.43
CTDSPL-201ENST00000273179 IGHV3OR16-8A0A075B7F1 116 aa6.12□□□□□ -1.43
CTDSPL-201ENST00000273179 I3L2K1 104 aa6.12□□□□□ -1.43
CTDSPL-201ENST00000273179 IGLV1-51P01701 117 aa6.12□□□□□ -1.43
CTDSPL-201ENST00000273179 LINC01546A6NGU7 62 aa6.11□□□□□ -1.43
CTDSPL-201ENST00000273179 Q8N9L7 120 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms