RNA–Protein interactions for RNA: ENST00000270560.3

TM4SF5-201, Transcript of transmembrane 4 L six family member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF5, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF5-201ENST00000270560 TOMM7Q9P0U1 55 aa13.12□□□□□ -0.31
TM4SF5-201ENST00000270560 CKS1BP61024 79 aa13.11□□□□□ -0.31
TM4SF5-201ENST00000270560 RPL18AQ02543 176 aaKnown RBP13.11□□□□□ -0.31
TM4SF5-201ENST00000270560 C2orf82Q6UX34 121 aa13.11□□□□□ -0.31
TM4SF5-201ENST00000270560 SMIM1B2RUZ4 78 aa13.1□□□□□ -0.31
TM4SF5-201ENST00000270560 H3BRM9 83 aa13.1□□□□□ -0.31
TM4SF5-201ENST00000270560 TLX1NBP0CAT3 122 aa13.1□□□□□ -0.31
TM4SF5-201ENST00000270560 RPL37AP61513 92 aaKnown RBP13.09□□□□□ -0.31
TM4SF5-201ENST00000270560 KRTAP10-4P60372 401 aaPredicted RBP13.08□□□□□ -0.32
TM4SF5-201ENST00000270560 IFI27L1Q96BM0 104 aa13.08□□□□□ -0.32
TM4SF5-201ENST00000270560 SERF1AO75920 110 aa13.07□□□□□ -0.32
TM4SF5-201ENST00000270560 CXCL5P42830 114 aa13.07□□□□□ -0.32
TM4SF5-201ENST00000270560 FAM19A2Q8N3H0 131 aa13.07□□□□□ -0.32
TM4SF5-201ENST00000270560 C7orf33Q8WU49 177 aa13.07□□□□□ -0.32
TM4SF5-201ENST00000270560 SPINK8P0C7L1 97 aa13.06□□□□□ -0.32
TM4SF5-201ENST00000270560 Q6ZRP5 223 aa13.06□□□□□ -0.32
TM4SF5-201ENST00000270560 COX7B2Q8TF08 81 aa13.06□□□□□ -0.32
TM4SF5-201ENST00000270560 TRAV12-1A0A0B4J245 112 aa13.05□□□□□ -0.32
TM4SF5-201ENST00000270560 F8VRH5 84 aa13.05□□□□□ -0.32
TM4SF5-201ENST00000270560 LINC00310P59036 64 aa13.05□□□□□ -0.32
TM4SF5-201ENST00000270560 NDUFC2-KCTD14E9PQ53 114 aa13.04□□□□□ -0.32
TM4SF5-201ENST00000270560 ZNF22P17026 224 aaPredicted RBP13.04□□□□□ -0.32
TM4SF5-201ENST00000270560 CHTOPQ9Y3Y2 248 aaKnown RBP13.04□□□□□ -0.32
TM4SF5-201ENST00000270560 IGLV5-39A0A0G2JS06 123 aa13.02□□□□□ -0.33
TM4SF5-201ENST00000270560 A0A1W2PNN7 141 aa13.02□□□□□ -0.33
TM4SF5-201ENST00000270560 C11orf86A6NJI1 115 aa13.02□□□□□ -0.33
TM4SF5-201ENST00000270560 GAGE2EQ4V326 116 aa13.02□□□□□ -0.33
TM4SF5-201ENST00000270560 C9orf116Q5BN46 136 aaPredicted RBP13.02□□□□□ -0.33
TM4SF5-201ENST00000270560 GAGE2DQ9UEU5 116 aa13.02□□□□□ -0.33
TM4SF5-201ENST00000270560 LEPROTL1O95214 131 aa13.01□□□□□ -0.33
TM4SF5-201ENST00000270560 NUPR1O60356 82 aa13□□□□□ -0.33
TM4SF5-201ENST00000270560 HIST1H2BKO60814 126 aa12.99□□□□□ -0.33
TM4SF5-201ENST00000270560 HIST1H2BJP06899 126 aa12.99□□□□□ -0.33
TM4SF5-201ENST00000270560 HIST1H2BOP23527 126 aa12.99□□□□□ -0.33
TM4SF5-201ENST00000270560 HIST1H2BBP33778 126 aa12.99□□□□□ -0.33
TM4SF5-201ENST00000270560 HIST1H2BDP58876 126 aa12.99□□□□□ -0.33
TM4SF5-201ENST00000270560 HIST1H2BCP62807 126 aa12.99□□□□□ -0.33
TM4SF5-201ENST00000270560 HIST2H2BEQ16778 126 aa12.99□□□□□ -0.33
TM4SF5-201ENST00000270560 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.99□□□□□ -0.33
TM4SF5-201ENST00000270560 TMEM170BQ5T4T1 132 aa12.99□□□□□ -0.33
TM4SF5-201ENST00000270560 HIST1H2BHQ93079 126 aa12.99□□□□□ -0.33
TM4SF5-201ENST00000270560 HIST1H2BNQ99877 126 aa12.99□□□□□ -0.33
TM4SF5-201ENST00000270560 HIST1H2BMQ99879 126 aa12.99□□□□□ -0.33
TM4SF5-201ENST00000270560 HSPB8Q9UJY1 196 aa12.99□□□□□ -0.33
TM4SF5-201ENST00000270560 MYCBP2O75592 4640 aa12.97□□□□□ -0.33
TM4SF5-201ENST00000270560 S100A1P23297 94 aa12.96□□□□□ -0.33
TM4SF5-201ENST00000270560 FLG2Q5D862 2391 aaPredicted RBP12.95□□□□□ -0.34
TM4SF5-201ENST00000270560 FAM168BA1KXE4 195 aa12.94□□□□□ -0.34
TM4SF5-201ENST00000270560 FABP4P15090 132 aa12.94□□□□□ -0.34
TM4SF5-201ENST00000270560 ODF1Q14990 250 aa12.94□□□□□ -0.34
TM4SF5-201ENST00000270560 C9orf129Q5T035 196 aaKnown RBP12.94□□□□□ -0.34
TM4SF5-201ENST00000270560 H0Y8G0 127 aa12.93□□□□□ -0.34
TM4SF5-201ENST00000270560 PRR3P79522 188 aaKnown RBP12.93□□□□□ -0.34
TM4SF5-201ENST00000270560 TMEM223A0PJW6 202 aa12.92□□□□□ -0.34
TM4SF5-201ENST00000270560 HNRNPA3P51991 378 aaKnown RBP12.92□□□□□ -0.34
TM4SF5-201ENST00000270560 SFTA2Q6UW10 78 aa12.92□□□□□ -0.34
TM4SF5-201ENST00000270560 FAM19A5Q7Z5A7 132 aaPredicted RBP12.92□□□□□ -0.34
TM4SF5-201ENST00000270560 PHF5AQ7RTV0 110 aaKnown RBP12.91□□□□□ -0.34
TM4SF5-201ENST00000270560 PKHD1L1Q86WI1 4243 aa12.9□□□□□ -0.34
TM4SF5-201ENST00000270560 ATP6V1G1O75348 118 aa12.89□□□□□ -0.35
TM4SF5-201ENST00000270560 KRTAP7-1Q8IUC3 87 aa12.89□□□□□ -0.35
TM4SF5-201ENST00000270560 XAGE1AQ9HD64 81 aa12.89□□□□□ -0.35
TM4SF5-201ENST00000270560 PLNP26678 52 aa12.88□□□□□ -0.35
TM4SF5-201ENST00000270560 MAP1LC3CQ9BXW4 147 aa12.88□□□□□ -0.35
TM4SF5-201ENST00000270560 M0QXV9 152 aa12.86□□□□□ -0.35
TM4SF5-201ENST00000270560 COA6Q5JTJ3 125 aaKnown RBP12.86□□□□□ -0.35
TM4SF5-201ENST00000270560 ZNF625Q96I27 306 aaPredicted RBP12.86□□□□□ -0.35
TM4SF5-201ENST00000270560 KRTAP29-1A8MX34 341 aaPredicted RBP12.85□□□□□ -0.35
TM4SF5-201ENST00000270560 DPM2O94777 84 aa12.85□□□□□ -0.35
TM4SF5-201ENST00000270560 COX17Q14061 63 aa12.85□□□□□ -0.35
TM4SF5-201ENST00000270560 ERG28Q9UKR5 140 aa12.85□□□□□ -0.35
TM4SF5-201ENST00000270560 PFN2P35080 140 aa12.84□□□□□ -0.35
TM4SF5-201ENST00000270560 SERTAD4-AS1Q5TG53 156 aa12.84□□□□□ -0.35
TM4SF5-201ENST00000270560 PSORS1C2Q9UIG4 136 aa12.84□□□□□ -0.35
TM4SF5-201ENST00000270560 DMBT1Q9UGM3 2413 aaPredicted RBP12.83□□□□□ -0.36
TM4SF5-201ENST00000270560 OXTP01178 125 aa12.82□□□□□ -0.36
TM4SF5-201ENST00000270560 IGKCP01834 107 aa12.82□□□□□ -0.36
TM4SF5-201ENST00000270560 C22orf24Q9Y442 160 aa12.82□□□□□ -0.36
TM4SF5-201ENST00000270560 PMCHL2Q9BQD1 86 aa12.81□□□□□ -0.36
TM4SF5-201ENST00000270560 PLA2G2DQ9UNK4 145 aa12.81□□□□□ -0.36
TM4SF5-201ENST00000270560 LRP1Q07954 4544 aaKnown RBP12.8□□□□□ -0.36
TM4SF5-201ENST00000270560 SYS1-DBNDD2H3BUS1 97 aa12.8□□□□□ -0.36
TM4SF5-201ENST00000270560 J3QL48 77 aa12.8□□□□□ -0.36
TM4SF5-201ENST00000270560 UBE2BP63146 152 aa12.8□□□□□ -0.36
TM4SF5-201ENST00000270560 LBHQ53QV2 105 aaPredicted RBP12.8□□□□□ -0.36
TM4SF5-201ENST00000270560 TP73-AS1Q9UF72 201 aa12.8□□□□□ -0.36
TM4SF5-201ENST00000270560 FAT3Q8TDW7 4589 aa12.8□□□□□ -0.36
TM4SF5-201ENST00000270560 HERVK_113P61574 105 aa12.79□□□□□ -0.36
TM4SF5-201ENST00000270560 C1orf137Q5JT78 98 aa12.79□□□□□ -0.36
TM4SF5-201ENST00000270560 SPINK6Q6UWN8 80 aa12.79□□□□□ -0.36
TM4SF5-201ENST00000270560 HERV-K104P63124 156 aa12.78□□□□□ -0.36
TM4SF5-201ENST00000270560 SRSF9Q13242 221 aaKnown RBP eCLIP12.78□□□□□ -0.36
TM4SF5-201ENST00000270560 KRTAP11-1Q8IUC1 163 aa12.78□□□□□ -0.36
TM4SF5-201ENST00000270560 PLEKHB2Q96CS7 222 aa12.78□□□□□ -0.36
TM4SF5-201ENST00000270560 LEPROTO15243 131 aa12.77□□□□□ -0.37
TM4SF5-201ENST00000270560 SND1-IT1Q9HBX3 110 aa12.77□□□□□ -0.37
TM4SF5-201ENST00000270560 NDUFA12Q9UI09 145 aa12.77□□□□□ -0.37
TM4SF5-201ENST00000270560 IGLV5-37A0A075B6J1 123 aa12.76□□□□□ -0.37
TM4SF5-201ENST00000270560 PET117Q6UWS5 81 aa12.76□□□□□ -0.37
TM4SF5-201ENST00000270560 MRPL55Q7Z7F7 128 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms