RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 REG3GQ6UW15 175 aa9.34□□□□□ -0.91
TTC39A-202ENST00000262676 SBSPONQ8IVN8 264 aa9.34□□□□□ -0.91
TTC39A-202ENST00000262676 A0A1W2PPR1 153 aa9.34□□□□□ -0.91
TTC39A-202ENST00000262676 IGLV2-11P01706 119 aa9.34□□□□□ -0.91
TTC39A-202ENST00000262676 LINC00575Q6W349 94 aa9.33□□□□□ -0.92
TTC39A-202ENST00000262676 PTPRSQ13332 1948 aa9.33□□□□□ -0.92
TTC39A-202ENST00000262676 TRBV10-3A0A0K0K1G6 114 aa9.33□□□□□ -0.92
TTC39A-202ENST00000262676 Q8IZM0 81 aa9.33□□□□□ -0.92
TTC39A-202ENST00000262676 KIAA1549Q9HCM3 1950 aa9.33□□□□□ -0.92
TTC39A-202ENST00000262676 UTRNP46939 3433 aa9.33□□□□□ -0.92
TTC39A-202ENST00000262676 CEP295Q9C0D2 2601 aa9.32□□□□□ -0.92
TTC39A-202ENST00000262676 UNQ6190/PRO20217Q6UXQ8 127 aa9.32□□□□□ -0.92
TTC39A-202ENST00000262676 ANKRD11Q6UB99 2663 aaPredicted RBP9.32□□□□□ -0.92
TTC39A-202ENST00000262676 PRLHP81277 87 aa9.32□□□□□ -0.92
TTC39A-202ENST00000262676 C1orf134Q5TEV5 83 aa9.32□□□□□ -0.92
TTC39A-202ENST00000262676 YPEL4Q96NS1 127 aa9.31□□□□□ -0.92
TTC39A-202ENST00000262676 C11orf21Q9P2W6 132 aa9.31□□□□□ -0.92
TTC39A-202ENST00000262676 TLN2Q9Y4G6 2542 aa9.31□□□□□ -0.92
TTC39A-202ENST00000262676 ABCA12Q86UK0 2595 aa9.31□□□□□ -0.92
TTC39A-202ENST00000262676 CDC42SE2Q9NRR3 84 aa9.3□□□□□ -0.92
TTC39A-202ENST00000262676 HCG22E2RYF7 251 aa9.3□□□□□ -0.92
TTC39A-202ENST00000262676 COX6A2Q02221 97 aa9.3□□□□□ -0.92
TTC39A-202ENST00000262676 C6orf223Q8N319 242 aa9.3□□□□□ -0.92
TTC39A-202ENST00000262676 Q9BRP9 147 aa9.3□□□□□ -0.92
TTC39A-202ENST00000262676 SPAG11AQ6PDA7 123 aa9.3□□□□□ -0.92
TTC39A-202ENST00000262676 COL5A1P20908 1838 aaPredicted RBP9.29□□□□□ -0.92
TTC39A-202ENST00000262676 Q6ZPA2 131 aa9.29□□□□□ -0.92
TTC39A-202ENST00000262676 A0A087WSZ3 146 aa9.27□□□□□ -0.93
TTC39A-202ENST00000262676 C7orf65Q6ZTY9 151 aa9.27□□□□□ -0.93
TTC39A-202ENST00000262676 POLR2KP53803 58 aaKnown RBP9.27□□□□□ -0.93
TTC39A-202ENST00000262676 TMEM254Q8TBM7 123 aa9.27□□□□□ -0.93
TTC39A-202ENST00000262676 SPINT4Q6UDR6 99 aa9.26□□□□□ -0.93
TTC39A-202ENST00000262676 LINC01556Q5JQF7 62 aa9.26□□□□□ -0.93
TTC39A-202ENST00000262676 EDN2P20800 178 aa9.25□□□□□ -0.93
TTC39A-202ENST00000262676 EIF4EBP1Q13541 118 aaPredicted RBP9.25□□□□□ -0.93
TTC39A-202ENST00000262676 A0A1B0GU69 56 aa9.25□□□□□ -0.93
TTC39A-202ENST00000262676 NUP210LQ5VU65 1888 aa9.25□□□□□ -0.93
TTC39A-202ENST00000262676 FN1P02751 2386 aaKnown RBP9.25□□□□□ -0.93
TTC39A-202ENST00000262676 MYO9AB2RTY4 2548 aa9.25□□□□□ -0.93
TTC39A-202ENST00000262676 LINC00242Q5T6M2 205 aa9.25□□□□□ -0.93
TTC39A-202ENST00000262676 IGKV2D-30A0A075B6S6 120 aa9.24□□□□□ -0.93
TTC39A-202ENST00000262676 IGKV2-30P06310 120 aa9.24□□□□□ -0.93
TTC39A-202ENST00000262676 VPREB1P12018 145 aa9.24□□□□□ -0.93
TTC39A-202ENST00000262676 MRGPRG-AS1Q2M3A8 158 aa9.24□□□□□ -0.93
TTC39A-202ENST00000262676 Q8N6K4 173 aa9.24□□□□□ -0.93
TTC39A-202ENST00000262676 C1orf64Q8NEQ6 169 aa9.24□□□□□ -0.93
TTC39A-202ENST00000262676 LINC00574Q9H8X3 128 aa9.24□□□□□ -0.93
TTC39A-202ENST00000262676 POLQO75417 2590 aa9.24□□□□□ -0.93
TTC39A-202ENST00000262676 TSPEAR-AS2P59090 65 aa9.24□□□□□ -0.93
TTC39A-202ENST00000262676 IGIPA6NJ69 53 aa9.23□□□□□ -0.93
TTC39A-202ENST00000262676 RAI1Q7Z5J4 1906 aaPredicted RBP9.23□□□□□ -0.93
TTC39A-202ENST00000262676 SMIM1B2RUZ4 78 aa9.23□□□□□ -0.93
TTC39A-202ENST00000262676 ADAMTSL4-AS1Q5T5F5 129 aa9.23□□□□□ -0.93
TTC39A-202ENST00000262676 PRO0628Q9UI54 55 aa9.22□□□□□ -0.93
TTC39A-202ENST00000262676 KLLNB2CW77 178 aa9.22□□□□□ -0.93
TTC39A-202ENST00000262676 PLXNB1O43157 2135 aa9.22□□□□□ -0.93
TTC39A-202ENST00000262676 hDV103S1A0JD37 113 aa9.22□□□□□ -0.93
TTC39A-202ENST00000262676 A8MTW9 85 aa9.21□□□□□ -0.93
TTC39A-202ENST00000262676 C4orf26Q17RF5 130 aa9.21□□□□□ -0.93
TTC39A-202ENST00000262676 EGFEM1PQ0D2K5 195 aa9.21□□□□□ -0.93
TTC39A-202ENST00000262676 ZNF580Q9UK33 172 aa9.21□□□□□ -0.94
TTC39A-202ENST00000262676 LIMD2Q9BT23 127 aa9.2□□□□□ -0.94
TTC39A-202ENST00000262676 IGLV4-60A0A075B6I1 120 aa9.2□□□□□ -0.94
TTC39A-202ENST00000262676 MUC7Q8TAX7 377 aa9.2□□□□□ -0.94
TTC39A-202ENST00000262676 FSTL3O95633 263 aa9.2□□□□□ -0.94
TTC39A-202ENST00000262676 SMIM29Q86T20 159 aa9.2□□□□□ -0.94
TTC39A-202ENST00000262676 LINC00846Q9NV44 126 aa9.2□□□□□ -0.94
TTC39A-202ENST00000262676 CHCHD7Q9BUK0 85 aa9.18□□□□□ -0.94
TTC39A-202ENST00000262676 J3QL48 77 aa9.18□□□□□ -0.94
TTC39A-202ENST00000262676 EXPH5Q8NEV8 1989 aa9.18□□□□□ -0.94
TTC39A-202ENST00000262676 Q6ZTC4 211 aa9.18□□□□□ -0.94
TTC39A-202ENST00000262676 SETD2Q9BYW2 2564 aaPredicted RBP9.17□□□□□ -0.94
TTC39A-202ENST00000262676 IGLV8-61A0A075B6I0 122 aa9.17□□□□□ -0.94
TTC39A-202ENST00000262676 FAM229AH3BQW9 127 aa9.17□□□□□ -0.94
TTC39A-202ENST00000262676 KRTAP24-1Q3LI83 254 aa9.17□□□□□ -0.94
TTC39A-202ENST00000262676 NHLRC4P0CG21 123 aaPredicted RBP9.16□□□□□ -0.94
TTC39A-202ENST00000262676 C2orf48Q96LS8 159 aa9.16□□□□□ -0.94
TTC39A-202ENST00000262676 URB1-AS1Q96HZ7 61 aa9.15□□□□□ -0.94
TTC39A-202ENST00000262676 CRIP3Q6Q6R5 217 aa9.15□□□□□ -0.94
TTC39A-202ENST00000262676 MUC22E2RYF6 1773 aaPredicted RBP9.15□□□□□ -0.95
TTC39A-202ENST00000262676 IGLV1-40P01703 118 aa9.14□□□□□ -0.95
TTC39A-202ENST00000262676 CXCL6P80162 114 aa9.14□□□□□ -0.95
TTC39A-202ENST00000262676 LRP4O75096 1905 aa9.14□□□□□ -0.95
TTC39A-202ENST00000262676 USP9XQ93008 2570 aaPredicted RBP9.13□□□□□ -0.95
TTC39A-202ENST00000262676 LINC00310P59036 64 aa9.13□□□□□ -0.95
TTC39A-202ENST00000262676 MTORP42345 2549 aa9.12□□□□□ -0.95
TTC39A-202ENST00000262676 ATP11AUNQ6ZP68 121 aa9.12□□□□□ -0.95
TTC39A-202ENST00000262676 ACYP2P14621 99 aa9.12□□□□□ -0.95
TTC39A-202ENST00000262676 C2CD3Q4AC94 2353 aa9.11□□□□□ -0.95
TTC39A-202ENST00000262676 HCFC1P51610 2035 aa9.11□□□□□ -0.95
TTC39A-202ENST00000262676 C8orf87E5RJ46 101 aa9.1□□□□□ -0.95
TTC39A-202ENST00000262676 EPG5Q9HCE0 2579 aa9.1□□□□□ -0.95
TTC39A-202ENST00000262676 TET2Q6N021 2002 aaPredicted RBP9.1□□□□□ -0.95
TTC39A-202ENST00000262676 ODF3L2Q3SX64 289 aa9.09□□□□□ -0.95
TTC39A-202ENST00000262676 C16orf95Q9H693 158 aa9.09□□□□□ -0.95
TTC39A-202ENST00000262676 C6orf48Q9UBA6 75 aa9.09□□□□□ -0.95
TTC39A-202ENST00000262676 CNFNQ9BYD5 112 aa9.09□□□□□ -0.95
TTC39A-202ENST00000262676 FHL2Q14192 279 aa9.09□□□□□ -0.95
TTC39A-202ENST00000262676 IGLV1-51P01701 117 aa9.08□□□□□ -0.96
TTC39A-202ENST00000262676 SMCR5Q8TEV8 140 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms