RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 PRSS2P07478 247 aa6.7□□□□□ -1.34
PFDN5-201ENST00000243040 CXCL5P42830 114 aa6.7□□□□□ -1.34
PFDN5-201ENST00000243040 RPL18AQ02543 176 aaKnown RBP6.7□□□□□ -1.34
PFDN5-201ENST00000243040 GAGE2BQ13066 116 aa6.7□□□□□ -1.34
PFDN5-201ENST00000243040 BAGE3Q86Y29 109 aa6.7□□□□□ -1.34
PFDN5-201ENST00000243040 DPH3Q96FX2 82 aa6.7□□□□□ -1.34
PFDN5-201ENST00000243040 TOMM7Q9P0U1 55 aa6.7□□□□□ -1.34
PFDN5-201ENST00000243040 LINC00310P59036 64 aa6.69□□□□□ -1.34
PFDN5-201ENST00000243040 RPL37AP61513 92 aaKnown RBP6.69□□□□□ -1.34
PFDN5-201ENST00000243040 C2orf82Q6UX34 121 aa6.69□□□□□ -1.34
PFDN5-201ENST00000243040 FAT3Q8TDW7 4589 aa6.69□□□□□ -1.34
PFDN5-201ENST00000243040 TRAV12-1A0A0B4J245 112 aa6.68□□□□□ -1.34
PFDN5-201ENST00000243040 H3BRM9 83 aa6.68□□□□□ -1.34
PFDN5-201ENST00000243040 SERF1AO75920 110 aa6.68□□□□□ -1.34
PFDN5-201ENST00000243040 ZNF22P17026 224 aaPredicted RBP6.68□□□□□ -1.34
PFDN5-201ENST00000243040 NDUFA6P56556 154 aa6.68□□□□□ -1.34
PFDN5-201ENST00000243040 C6orf226Q5I0X4 101 aa6.68□□□□□ -1.34
PFDN5-201ENST00000243040 Q6ZRP5 223 aa6.68□□□□□ -1.34
PFDN5-201ENST00000243040 IFI27L1Q96BM0 104 aa6.68□□□□□ -1.34
PFDN5-201ENST00000243040 NDUFC2-KCTD14E9PQ53 114 aa6.67□□□□□ -1.34
PFDN5-201ENST00000243040 F8VRH5 84 aa6.67□□□□□ -1.34
PFDN5-201ENST00000243040 SPINK8P0C7L1 97 aa6.67□□□□□ -1.34
PFDN5-201ENST00000243040 CKS1BP61024 79 aa6.67□□□□□ -1.34
PFDN5-201ENST00000243040 FAM19A2Q8N3H0 131 aa6.67□□□□□ -1.34
PFDN5-201ENST00000243040 COX7B2Q8TF08 81 aa6.67□□□□□ -1.34
PFDN5-201ENST00000243040 C7orf33Q8WU49 177 aa6.67□□□□□ -1.34
PFDN5-201ENST00000243040 IGLV5-39A0A0G2JS06 123 aa6.66□□□□□ -1.34
PFDN5-201ENST00000243040 C11orf86A6NJI1 115 aa6.66□□□□□ -1.34
PFDN5-201ENST00000243040 C9orf116Q5BN46 136 aaPredicted RBP6.66□□□□□ -1.34
PFDN5-201ENST00000243040 CHTOPQ9Y3Y2 248 aaKnown RBP6.66□□□□□ -1.34
PFDN5-201ENST00000243040 A0A1W2PNN7 141 aa6.65□□□□□ -1.34
PFDN5-201ENST00000243040 LEPROTL1O95214 131 aa6.65□□□□□ -1.34
PFDN5-201ENST00000243040 NUPR1O60356 82 aa6.64□□□□□ -1.35
PFDN5-201ENST00000243040 HIST1H2BKO60814 126 aa6.64□□□□□ -1.35
PFDN5-201ENST00000243040 HIST1H2BJP06899 126 aa6.64□□□□□ -1.35
PFDN5-201ENST00000243040 HIST1H2BOP23527 126 aa6.64□□□□□ -1.35
PFDN5-201ENST00000243040 HIST1H2BBP33778 126 aa6.64□□□□□ -1.35
PFDN5-201ENST00000243040 HIST1H2BDP58876 126 aa6.64□□□□□ -1.35
PFDN5-201ENST00000243040 HIST1H2BCP62807 126 aa6.64□□□□□ -1.35
PFDN5-201ENST00000243040 HIST2H2BEQ16778 126 aa6.64□□□□□ -1.35
PFDN5-201ENST00000243040 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.64□□□□□ -1.35
PFDN5-201ENST00000243040 HIST1H2BHQ93079 126 aa6.64□□□□□ -1.35
PFDN5-201ENST00000243040 HIST1H2BNQ99877 126 aa6.64□□□□□ -1.35
PFDN5-201ENST00000243040 HIST1H2BMQ99879 126 aa6.64□□□□□ -1.35
PFDN5-201ENST00000243040 LRP1Q07954 4544 aaKnown RBP6.64□□□□□ -1.35
PFDN5-201ENST00000243040 FLG2Q5D862 2391 aaPredicted RBP6.64□□□□□ -1.35
PFDN5-201ENST00000243040 GAGE2EQ4V326 116 aa6.63□□□□□ -1.35
PFDN5-201ENST00000243040 TMEM170BQ5T4T1 132 aa6.63□□□□□ -1.35
PFDN5-201ENST00000243040 GAGE2DQ9UEU5 116 aa6.63□□□□□ -1.35
PFDN5-201ENST00000243040 S100A1P23297 94 aa6.62□□□□□ -1.35
PFDN5-201ENST00000243040 HNRNPA3P51991 378 aaKnown RBP6.62□□□□□ -1.35
PFDN5-201ENST00000243040 PRR3P79522 188 aaKnown RBP6.62□□□□□ -1.35
PFDN5-201ENST00000243040 ODF1Q14990 250 aa6.62□□□□□ -1.35
PFDN5-201ENST00000243040 C9orf129Q5T035 196 aaKnown RBP6.62□□□□□ -1.35
PFDN5-201ENST00000243040 HSPB8Q9UJY1 196 aa6.62□□□□□ -1.35
PFDN5-201ENST00000243040 TMEM223A0PJW6 202 aa6.61□□□□□ -1.35
PFDN5-201ENST00000243040 FAM168BA1KXE4 195 aa6.61□□□□□ -1.35
PFDN5-201ENST00000243040 SFTA2Q6UW10 78 aa6.61□□□□□ -1.35
PFDN5-201ENST00000243040 KRTAP7-1Q8IUC3 87 aa6.61□□□□□ -1.35
PFDN5-201ENST00000243040 PHF5AQ7RTV0 110 aaKnown RBP6.6□□□□□ -1.35
PFDN5-201ENST00000243040 FAM19A5Q7Z5A7 132 aaPredicted RBP6.6□□□□□ -1.35
PFDN5-201ENST00000243040 KRTAP29-1A8MX34 341 aaPredicted RBP6.59□□□□□ -1.35
PFDN5-201ENST00000243040 M0QXV9 152 aa6.59□□□□□ -1.35
PFDN5-201ENST00000243040 ATP6V1G1O75348 118 aa6.59□□□□□ -1.35
PFDN5-201ENST00000243040 FABP4P15090 132 aa6.59□□□□□ -1.35
PFDN5-201ENST00000243040 COA6Q5JTJ3 125 aaKnown RBP6.59□□□□□ -1.35
PFDN5-201ENST00000243040 ZNF625Q96I27 306 aaPredicted RBP6.59□□□□□ -1.35
PFDN5-201ENST00000243040 H0Y8G0 127 aa6.58□□□□□ -1.36
PFDN5-201ENST00000243040 PLNP26678 52 aa6.58□□□□□ -1.36
PFDN5-201ENST00000243040 XAGE1AQ9HD64 81 aa6.58□□□□□ -1.36
PFDN5-201ENST00000243040 OXTP01178 125 aa6.57□□□□□ -1.36
PFDN5-201ENST00000243040 COX17Q14061 63 aa6.57□□□□□ -1.36
PFDN5-201ENST00000243040 SERTAD4-AS1Q5TG53 156 aa6.57□□□□□ -1.36
PFDN5-201ENST00000243040 MAP1LC3CQ9BXW4 147 aa6.57□□□□□ -1.36
PFDN5-201ENST00000243040 TP73-AS1Q9UF72 201 aa6.57□□□□□ -1.36
PFDN5-201ENST00000243040 PSORS1C2Q9UIG4 136 aa6.57□□□□□ -1.36
PFDN5-201ENST00000243040 ERG28Q9UKR5 140 aa6.57□□□□□ -1.36
PFDN5-201ENST00000243040 PLA2G2DQ9UNK4 145 aa6.57□□□□□ -1.36
PFDN5-201ENST00000243040 TNXBP22105 4242 aa6.56□□□□□ -1.36
PFDN5-201ENST00000243040 DPM2O94777 84 aa6.56□□□□□ -1.36
PFDN5-201ENST00000243040 HERC1Q15751 4861 aa6.56□□□□□ -1.36
PFDN5-201ENST00000243040 DMBT1Q9UGM3 2413 aaPredicted RBP6.55□□□□□ -1.36
PFDN5-201ENST00000243040 IGLV5-37A0A075B6J1 123 aa6.55□□□□□ -1.36
PFDN5-201ENST00000243040 IGKCP01834 107 aa6.55□□□□□ -1.36
PFDN5-201ENST00000243040 C22orf24Q9Y442 160 aa6.55□□□□□ -1.36
PFDN5-201ENST00000243040 SYS1-DBNDD2H3BUS1 97 aa6.54□□□□□ -1.36
PFDN5-201ENST00000243040 PFN2P35080 140 aa6.54□□□□□ -1.36
PFDN5-201ENST00000243040 HERV-K104P63124 156 aa6.54□□□□□ -1.36
PFDN5-201ENST00000243040 UBE2BP63146 152 aa6.54□□□□□ -1.36
PFDN5-201ENST00000243040 SRSF9Q13242 221 aaKnown RBP eCLIP6.54□□□□□ -1.36
PFDN5-201ENST00000243040 SPINK6Q6UWN8 80 aa6.54□□□□□ -1.36
PFDN5-201ENST00000243040 KRTAP11-1Q8IUC1 163 aa6.54□□□□□ -1.36
PFDN5-201ENST00000243040 PMCHL2Q9BQD1 86 aa6.54□□□□□ -1.36
PFDN5-201ENST00000243040 LEPROTO15243 131 aa6.53□□□□□ -1.36
PFDN5-201ENST00000243040 HERVK_113P61574 105 aa6.53□□□□□ -1.36
PFDN5-201ENST00000243040 LBHQ53QV2 105 aaPredicted RBP6.53□□□□□ -1.36
PFDN5-201ENST00000243040 C1orf137Q5JT78 98 aa6.53□□□□□ -1.36
PFDN5-201ENST00000243040 MRPL55Q7Z7F7 128 aaKnown RBP6.53□□□□□ -1.36
PFDN5-201ENST00000243040 PLEKHB2Q96CS7 222 aa6.53□□□□□ -1.36
PFDN5-201ENST00000243040 J3QL48 77 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms