RNA–Protein interactions for RNA: ENST00000236273.8

SYF2-201, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYF2, Length 1,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-201ENST00000236273 TLX1NBP0CAT3 122 aa14.03□□□□□ -0.16
SYF2-201ENST00000236273 TOMM7Q9P0U1 55 aa14.03□□□□□ -0.16
SYF2-201ENST00000236273 LINC00474Q9P2X8 69 aa14.03□□□□□ -0.16
SYF2-201ENST00000236273 IFI27L1Q96BM0 104 aa14.02□□□□□ -0.17
SYF2-201ENST00000236273 PACRGQ96M98 296 aaPredicted RBP14.02□□□□□ -0.17
SYF2-201ENST00000236273 TRBV30A0A0K0K1B3 111 aa14.01□□□□□ -0.17
SYF2-201ENST00000236273 PLA2G1BP04054 148 aaKnown RBP14.01□□□□□ -0.17
SYF2-201ENST00000236273 SPINK8P0C7L1 97 aa14.01□□□□□ -0.17
SYF2-201ENST00000236273 INAFM2P0DMQ5 153 aa14.01□□□□□ -0.17
SYF2-201ENST00000236273 ZNF22P17026 224 aaPredicted RBP14.01□□□□□ -0.17
SYF2-201ENST00000236273 C6orf226Q5I0X4 101 aa14.01□□□□□ -0.17
SYF2-201ENST00000236273 Q6ZRP5 223 aa14.01□□□□□ -0.17
SYF2-201ENST00000236273 A0A1W2PNN7 141 aa14□□□□□ -0.17
SYF2-201ENST00000236273 C9orf116Q5BN46 136 aaPredicted RBP14□□□□□ -0.17
SYF2-201ENST00000236273 PRSS2P07478 247 aa13.99□□□□□ -0.17
SYF2-201ENST00000236273 RPL18AQ02543 176 aaKnown RBP13.99□□□□□ -0.17
SYF2-201ENST00000236273 MYCBP2O75592 4640 aa13.99□□□□□ -0.17
SYF2-201ENST00000236273 TRAV12-1A0A0B4J245 112 aa13.98□□□□□ -0.17
SYF2-201ENST00000236273 C11orf86A6NJI1 115 aa13.98□□□□□ -0.17
SYF2-201ENST00000236273 HIST1H2BKO60814 126 aa13.98□□□□□ -0.17
SYF2-201ENST00000236273 HIST1H2BJP06899 126 aa13.98□□□□□ -0.17
SYF2-201ENST00000236273 HIST1H2BOP23527 126 aa13.98□□□□□ -0.17
SYF2-201ENST00000236273 HIST1H2BBP33778 126 aa13.98□□□□□ -0.17
SYF2-201ENST00000236273 HIST1H2BDP58876 126 aa13.98□□□□□ -0.17
SYF2-201ENST00000236273 HIST1H2BCP62807 126 aa13.98□□□□□ -0.17
SYF2-201ENST00000236273 HIST2H2BEQ16778 126 aa13.98□□□□□ -0.17
SYF2-201ENST00000236273 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.98□□□□□ -0.17
SYF2-201ENST00000236273 HIST1H2BHQ93079 126 aa13.98□□□□□ -0.17
SYF2-201ENST00000236273 HIST1H2BNQ99877 126 aa13.98□□□□□ -0.17
SYF2-201ENST00000236273 HIST1H2BMQ99879 126 aa13.98□□□□□ -0.17
SYF2-201ENST00000236273 FLG2Q5D862 2391 aaPredicted RBP13.98□□□□□ -0.17
SYF2-201ENST00000236273 IGLV5-39A0A0G2JS06 123 aa13.97□□□□□ -0.17
SYF2-201ENST00000236273 CKS1BP61024 79 aa13.96□□□□□ -0.17
SYF2-201ENST00000236273 COX7B2Q8TF08 81 aa13.96□□□□□ -0.17
SYF2-201ENST00000236273 CHTOPQ9Y3Y2 248 aaKnown RBP13.96□□□□□ -0.17
SYF2-201ENST00000236273 PKHD1L1Q86WI1 4243 aa13.96□□□□□ -0.18
SYF2-201ENST00000236273 H3BRM9 83 aa13.95□□□□□ -0.18
SYF2-201ENST00000236273 RPL37AP61513 92 aaKnown RBP13.95□□□□□ -0.18
SYF2-201ENST00000236273 NDUFC2-KCTD14E9PQ53 114 aa13.93□□□□□ -0.18
SYF2-201ENST00000236273 F8VRH5 84 aa13.93□□□□□ -0.18
SYF2-201ENST00000236273 LEPROTL1O95214 131 aa13.93□□□□□ -0.18
SYF2-201ENST00000236273 CXCL5P42830 114 aa13.92□□□□□ -0.18
SYF2-201ENST00000236273 GAGE2EQ4V326 116 aa13.92□□□□□ -0.18
SYF2-201ENST00000236273 KRTAP7-1Q8IUC3 87 aa13.92□□□□□ -0.18
SYF2-201ENST00000236273 GAGE2DQ9UEU5 116 aa13.92□□□□□ -0.18
SYF2-201ENST00000236273 ATP6V1G1O75348 118 aa13.91□□□□□ -0.18
SYF2-201ENST00000236273 HNRNPA3P51991 378 aaKnown RBP13.91□□□□□ -0.18
SYF2-201ENST00000236273 FAM168BA1KXE4 195 aa13.9□□□□□ -0.18
SYF2-201ENST00000236273 S100A1P23297 94 aa13.9□□□□□ -0.18
SYF2-201ENST00000236273 ODF1Q14990 250 aa13.9□□□□□ -0.18
SYF2-201ENST00000236273 C9orf129Q5T035 196 aaKnown RBP13.9□□□□□ -0.18
SYF2-201ENST00000236273 FABP4P15090 132 aa13.9□□□□□ -0.19
SYF2-201ENST00000236273 TMEM170BQ5T4T1 132 aa13.9□□□□□ -0.19
SYF2-201ENST00000236273 LRP1Q07954 4544 aaKnown RBP13.89□□□□□ -0.19
SYF2-201ENST00000236273 TMEM223A0PJW6 202 aa13.88□□□□□ -0.19
SYF2-201ENST00000236273 C7orf33Q8WU49 177 aa13.88□□□□□ -0.19
SYF2-201ENST00000236273 HSPB8Q9UJY1 196 aa13.87□□□□□ -0.19
SYF2-201ENST00000236273 FAT3Q8TDW7 4589 aa13.86□□□□□ -0.19
SYF2-201ENST00000236273 PHF5AQ7RTV0 110 aaKnown RBP13.85□□□□□ -0.19
SYF2-201ENST00000236273 H0Y8G0 127 aa13.84□□□□□ -0.19
SYF2-201ENST00000236273 COA6Q5JTJ3 125 aaKnown RBP13.84□□□□□ -0.19
SYF2-201ENST00000236273 PRR3P79522 188 aaKnown RBP13.82□□□□□ -0.2
SYF2-201ENST00000236273 XAGE1AQ9HD64 81 aa13.82□□□□□ -0.2
SYF2-201ENST00000236273 FAM19A5Q7Z5A7 132 aaPredicted RBP13.81□□□□□ -0.2
SYF2-201ENST00000236273 KRTAP11-1Q8IUC1 163 aa13.81□□□□□ -0.2
SYF2-201ENST00000236273 ZNF625Q96I27 306 aaPredicted RBP13.81□□□□□ -0.2
SYF2-201ENST00000236273 SERTAD4-AS1Q5TG53 156 aa13.79□□□□□ -0.2
SYF2-201ENST00000236273 PMCHL2Q9BQD1 86 aa13.79□□□□□ -0.2
SYF2-201ENST00000236273 MAP1LC3CQ9BXW4 147 aa13.77□□□□□ -0.21
SYF2-201ENST00000236273 PLNP26678 52 aa13.75□□□□□ -0.21
SYF2-201ENST00000236273 PSORS1C2Q9UIG4 136 aa13.75□□□□□ -0.21
SYF2-201ENST00000236273 ERG28Q9UKR5 140 aa13.75□□□□□ -0.21
SYF2-201ENST00000236273 SYS1-DBNDD2H3BUS1 97 aa13.74□□□□□ -0.21
SYF2-201ENST00000236273 M0QXV9 152 aa13.74□□□□□ -0.21
SYF2-201ENST00000236273 DPM2O94777 84 aa13.74□□□□□ -0.21
SYF2-201ENST00000236273 PFN2P35080 140 aa13.74□□□□□ -0.21
SYF2-201ENST00000236273 HERC1Q15751 4861 aa13.74□□□□□ -0.21
SYF2-201ENST00000236273 KRTAP29-1A8MX34 341 aaPredicted RBP13.73□□□□□ -0.21
SYF2-201ENST00000236273 SRSF9Q13242 221 aaKnown RBP eCLIP13.73□□□□□ -0.21
SYF2-201ENST00000236273 C22orf24Q9Y442 160 aa13.73□□□□□ -0.21
SYF2-201ENST00000236273 IGKCP01834 107 aa13.72□□□□□ -0.21
SYF2-201ENST00000236273 SFTA2Q6UW10 78 aa13.72□□□□□ -0.21
SYF2-201ENST00000236273 PLA2G2DQ9UNK4 145 aa13.72□□□□□ -0.21
SYF2-201ENST00000236273 TSPEAR-AS2P59090 65 aa13.71□□□□□ -0.21
SYF2-201ENST00000236273 COX17Q14061 63 aa13.71□□□□□ -0.21
SYF2-201ENST00000236273 DMBT1Q9UGM3 2413 aaPredicted RBP13.7□□□□□ -0.22
SYF2-201ENST00000236273 SND1-IT1Q9HBX3 110 aa13.69□□□□□ -0.22
SYF2-201ENST00000236273 LEPROTO15243 131 aa13.68□□□□□ -0.22
SYF2-201ENST00000236273 C3orf79P0CE67 100 aa13.68□□□□□ -0.22
SYF2-201ENST00000236273 LINC01545Q5VT33 79 aa13.68□□□□□ -0.22
SYF2-201ENST00000236273 PET117Q6UWS5 81 aa13.67□□□□□ -0.22
SYF2-201ENST00000236273 TP73-AS1Q9UF72 201 aa13.67□□□□□ -0.22
SYF2-201ENST00000236273 NDUFA12Q9UI09 145 aa13.67□□□□□ -0.22
SYF2-201ENST00000236273 IGLV5-37A0A075B6J1 123 aa13.66□□□□□ -0.22
SYF2-201ENST00000236273 C1orf137Q5JT78 98 aa13.66□□□□□ -0.22
SYF2-201ENST00000236273 OXTP01178 125 aa13.65□□□□□ -0.22
SYF2-201ENST00000236273 Q8NDZ9 215 aa13.65□□□□□ -0.22
SYF2-201ENST00000236273 SPINK6Q6UWN8 80 aa13.64□□□□□ -0.23
SYF2-201ENST00000236273 PLEKHB2Q96CS7 222 aa13.64□□□□□ -0.23
SYF2-201ENST00000236273 J3QQQ9 107 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms