RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 Q6ZRU5 148 aa6.58□□□□□ -1.36
HMGCL-201ENST00000235958 C16orf90A8MZG2 172 aa6.57□□□□□ -1.36
HMGCL-201ENST00000235958 NDUFA1O15239 70 aa6.57□□□□□ -1.36
HMGCL-201ENST00000235958 STPG4Q8N801 248 aa6.57□□□□□ -1.36
HMGCL-201ENST00000235958 KRTAP10-1P60331 282 aa6.56□□□□□ -1.36
HMGCL-201ENST00000235958 RNF151Q2KHN1 245 aa6.56□□□□□ -1.36
HMGCL-201ENST00000235958 SDIM1Q6ZPB5 146 aa6.56□□□□□ -1.36
HMGCL-201ENST00000235958 ATOH7Q8N100 152 aa6.56□□□□□ -1.36
HMGCL-201ENST00000235958 CARD19Q96LW7 228 aa6.56□□□□□ -1.36
HMGCL-201ENST00000235958 SCGB1D1O95968 90 aa6.55□□□□□ -1.36
HMGCL-201ENST00000235958 AKR1D1P51857 326 aa6.55□□□□□ -1.36
HMGCL-201ENST00000235958 HERVK_113P61574 105 aa6.55□□□□□ -1.36
HMGCL-201ENST00000235958 LEPROTO15243 131 aa6.54□□□□□ -1.36
HMGCL-201ENST00000235958 C9orf116Q5BN46 136 aaPredicted RBP6.54□□□□□ -1.36
HMGCL-201ENST00000235958 PLEKHB2Q96CS7 222 aa6.54□□□□□ -1.36
HMGCL-201ENST00000235958 C6orf48Q9UBA6 75 aa6.54□□□□□ -1.36
HMGCL-201ENST00000235958 PKHD1P08F94 4074 aa6.54□□□□□ -1.36
HMGCL-201ENST00000235958 TRBV30A0A0K0K1B3 111 aa6.53□□□□□ -1.36
HMGCL-201ENST00000235958 E9PLD3 99 aa6.53□□□□□ -1.36
HMGCL-201ENST00000235958 J3QQQ9 107 aa6.53□□□□□ -1.36
HMGCL-201ENST00000235958 CXCL5P42830 114 aa6.53□□□□□ -1.36
HMGCL-201ENST00000235958 ZNF625Q96I27 306 aaPredicted RBP6.53□□□□□ -1.36
HMGCL-201ENST00000235958 HECTD4Q9Y4D8 3996 aa6.52□□□□□ -1.37
HMGCL-201ENST00000235958 TSPEAR-AS2P59090 65 aa6.52□□□□□ -1.37
HMGCL-201ENST00000235958 MAJINQ3KP22 176 aa6.52□□□□□ -1.37
HMGCL-201ENST00000235958 FAM30AQ9NZY2 134 aa6.52□□□□□ -1.37
HMGCL-201ENST00000235958 NDUFA12Q9UI09 145 aa6.52□□□□□ -1.37
HMGCL-201ENST00000235958 IGKV2D-26A0A0A0MRZ7 120 aa6.51□□□□□ -1.37
HMGCL-201ENST00000235958 LOC107984640A0A0U1RRK4 108 aa6.51□□□□□ -1.37
HMGCL-201ENST00000235958 JOSD1Q15040 202 aaPredicted RBP6.51□□□□□ -1.37
HMGCL-201ENST00000235958 ANKRD39Q53RE8 183 aa6.51□□□□□ -1.37
HMGCL-201ENST00000235958 DPH3Q96FX2 82 aa6.51□□□□□ -1.37
HMGCL-201ENST00000235958 MYMXA0A1B0GTQ4 84 aa6.5□□□□□ -1.37
HMGCL-201ENST00000235958 TLX1NBP0CAT3 122 aa6.5□□□□□ -1.37
HMGCL-201ENST00000235958 LGALS3P17931 250 aaKnown RBP6.5□□□□□ -1.37
HMGCL-201ENST00000235958 GAGE2BQ13066 116 aa6.5□□□□□ -1.37
HMGCL-201ENST00000235958 SFTA2Q6UW10 78 aa6.5□□□□□ -1.37
HMGCL-201ENST00000235958 A0A096LNI7 61 aa6.49□□□□□ -1.37
HMGCL-201ENST00000235958 IGKV2-24A0A0C4DH68 120 aa6.49□□□□□ -1.37
HMGCL-201ENST00000235958 HSBP1L1C9JCN9 74 aa6.49□□□□□ -1.37
HMGCL-201ENST00000235958 NDUFC2-KCTD14E9PQ53 114 aa6.49□□□□□ -1.37
HMGCL-201ENST00000235958 PANO1I0J062 215 aa6.49□□□□□ -1.37
HMGCL-201ENST00000235958 CHTF8P0CG12 524 aa6.49□□□□□ -1.37
HMGCL-201ENST00000235958 HERV-K104P63124 156 aa6.49□□□□□ -1.37
HMGCL-201ENST00000235958 Q6ZRP5 223 aa6.49□□□□□ -1.37
HMGCL-201ENST00000235958 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.49□□□□□ -1.37
HMGCL-201ENST00000235958 PFN2P35080 140 aa6.48□□□□□ -1.37
HMGCL-201ENST00000235958 NMUP48645 174 aa6.48□□□□□ -1.37
HMGCL-201ENST00000235958 PTTG1IPP53801 180 aa6.48□□□□□ -1.37
HMGCL-201ENST00000235958 RPL18AQ02543 176 aaKnown RBP6.48□□□□□ -1.37
HMGCL-201ENST00000235958 GAGE2EQ4V326 116 aa6.48□□□□□ -1.37
HMGCL-201ENST00000235958 PYY3Q5JQD4 70 aa6.48□□□□□ -1.37
HMGCL-201ENST00000235958 Q6ZSA8 131 aa6.48□□□□□ -1.37
HMGCL-201ENST00000235958 TTTY13Q9BZ97 58 aa6.48□□□□□ -1.37
HMGCL-201ENST00000235958 GAGE2DQ9UEU5 116 aa6.48□□□□□ -1.37
HMGCL-201ENST00000235958 ERG28Q9UKR5 140 aa6.48□□□□□ -1.37
HMGCL-201ENST00000235958 PKIGQ9Y2B9 76 aa6.48□□□□□ -1.37
HMGCL-201ENST00000235958 LINC00158P58513 81 aa6.47□□□□□ -1.37
HMGCL-201ENST00000235958 COX17Q14061 63 aa6.47□□□□□ -1.37
HMGCL-201ENST00000235958 LINC00474Q9P2X8 69 aa6.47□□□□□ -1.37
HMGCL-201ENST00000235958 DNAH5Q8TE73 4624 aa6.46□□□□□ -1.37
HMGCL-201ENST00000235958 DYNC1H1Q14204 4646 aaKnown RBP6.46□□□□□ -1.38
HMGCL-201ENST00000235958 A0A0U1RRA0 63 aa6.46□□□□□ -1.38
HMGCL-201ENST00000235958 LINC00587B1AMM8 73 aa6.46□□□□□ -1.38
HMGCL-201ENST00000235958 SMIM13P0DJ93 91 aa6.46□□□□□ -1.38
HMGCL-201ENST00000235958 XGP55808 180 aa6.46□□□□□ -1.38
HMGCL-201ENST00000235958 CIRBPQ14011 172 aaKnown RBP6.46□□□□□ -1.38
HMGCL-201ENST00000235958 PCP2Q8IVA1 136 aa6.46□□□□□ -1.38
HMGCL-201ENST00000235958 SPACA4Q8TDM5 124 aa6.46□□□□□ -1.38
HMGCL-201ENST00000235958 A0A087WYN8 130 aa6.45□□□□□ -1.38
HMGCL-201ENST00000235958 A0A0J9YXY3 114 aa6.45□□□□□ -1.38
HMGCL-201ENST00000235958 ZNF815PA8K554 130 aa6.45□□□□□ -1.38
HMGCL-201ENST00000235958 MEIG1Q5JSS6 88 aa6.45□□□□□ -1.38
HMGCL-201ENST00000235958 CIRBP-AS1Q8TBR5 109 aa6.45□□□□□ -1.38
HMGCL-201ENST00000235958 XAGE1AQ9HD64 81 aa6.45□□□□□ -1.38
HMGCL-201ENST00000235958 LRP1BQ9NZR2 4599 aa6.44□□□□□ -1.38
HMGCL-201ENST00000235958 LOC105371267A0A1B0GV96 52 aa6.44□□□□□ -1.38
HMGCL-201ENST00000235958 A0A1W2PNN7 141 aa6.44□□□□□ -1.38
HMGCL-201ENST00000235958 HAMPP81172 84 aa6.44□□□□□ -1.38
HMGCL-201ENST00000235958 C9orf129Q5T035 196 aaKnown RBP6.44□□□□□ -1.38
HMGCL-201ENST00000235958 SCXQ7RTU7 201 aa6.44□□□□□ -1.38
HMGCL-201ENST00000235958 SND1-IT1Q9HBX3 110 aa6.44□□□□□ -1.38
HMGCL-201ENST00000235958 PAM16Q9Y3D7 125 aa6.44□□□□□ -1.38
HMGCL-201ENST00000235958 FAM168BA1KXE4 195 aa6.43□□□□□ -1.38
HMGCL-201ENST00000235958 CDK2AP2O75956 126 aa6.43□□□□□ -1.38
HMGCL-201ENST00000235958 ADAMTSL4-AS1Q5T5F5 129 aa6.43□□□□□ -1.38
HMGCL-201ENST00000235958 VAMP8Q9BV40 100 aa6.43□□□□□ -1.38
HMGCL-201ENST00000235958 SPATA45Q537H7 98 aa6.42□□□□□ -1.38
HMGCL-201ENST00000235958 MIR7-3HGQ8N6C7 128 aa6.42□□□□□ -1.38
HMGCL-201ENST00000235958 DAND5Q8N907 189 aa6.42□□□□□ -1.38
HMGCL-201ENST00000235958 PLAC8Q9NZF1 115 aa6.42□□□□□ -1.38
HMGCL-201ENST00000235958 DNAH8Q96JB1 4490 aa6.42□□□□□ -1.38
HMGCL-201ENST00000235958 EPM2AB3EWF7 344 aa6.41□□□□□ -1.38
HMGCL-201ENST00000235958 COX8AP10176 69 aa6.41□□□□□ -1.38
HMGCL-201ENST00000235958 SCGB1D4Q6XE38 83 aa6.41□□□□□ -1.38
HMGCL-201ENST00000235958 KRTAP7-1Q8IUC3 87 aa6.41□□□□□ -1.38
HMGCL-201ENST00000235958 C14orf144Q96I85 54 aa6.41□□□□□ -1.38
HMGCL-201ENST00000235958 TIMM17BO60830 172 aa6.4□□□□□ -1.38
HMGCL-201ENST00000235958 SMR3BP02814 79 aaPredicted RBP6.4□□□□□ -1.38
HMGCL-201ENST00000235958 SERTAD4-AS1Q5TG53 156 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms