RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 NF1P21359 2839 aa12.44□□□□□ -0.42
CDKN1B-201ENST00000228872 ORMDL1Q9P0S3 153 aa12.44□□□□□ -0.42
CDKN1B-201ENST00000228872 FASNP49327 2511 aaKnown RBP12.43□□□□□ -0.42
CDKN1B-201ENST00000228872 UBE2L6O14933 153 aa12.43□□□□□ -0.42
CDKN1B-201ENST00000228872 HRCT1Q6UXD1 115 aa12.43□□□□□ -0.42
CDKN1B-201ENST00000228872 GHRHP01286 108 aa12.43□□□□□ -0.42
CDKN1B-201ENST00000228872 TMEM243Q9BU79 118 aa12.43□□□□□ -0.42
CDKN1B-201ENST00000228872 IL17DQ8TAD2 202 aa12.42□□□□□ -0.42
CDKN1B-201ENST00000228872 HECTD1Q9ULT8 2610 aa12.42□□□□□ -0.42
CDKN1B-201ENST00000228872 CUBNO60494 3623 aa12.41□□□□□ -0.42
CDKN1B-201ENST00000228872 PAX4O43316 350 aa12.41□□□□□ -0.42
CDKN1B-201ENST00000228872 DEFB136Q30KP8 78 aa12.41□□□□□ -0.42
CDKN1B-201ENST00000228872 ESM1Q9NQ30 184 aa12.41□□□□□ -0.42
CDKN1B-201ENST00000228872 XCL2Q9UBD3 114 aa12.41□□□□□ -0.42
CDKN1B-201ENST00000228872 IBA57-AS1B1ANH7 110 aa12.41□□□□□ -0.42
CDKN1B-201ENST00000228872 S100A7L2Q5SY68 101 aa12.41□□□□□ -0.42
CDKN1B-201ENST00000228872 WFDC9Q8NEX5 89 aa12.41□□□□□ -0.42
CDKN1B-201ENST00000228872 NDUFC2-KCTD14E9PQ53 114 aa12.4□□□□□ -0.42
CDKN1B-201ENST00000228872 PFN2P35080 140 aa12.4□□□□□ -0.42
CDKN1B-201ENST00000228872 ATP5EP2Q5VTU8 51 aa12.4□□□□□ -0.42
CDKN1B-201ENST00000228872 C18orf65Q6ZTR6 163 aa12.4□□□□□ -0.42
CDKN1B-201ENST00000228872 NDUFC2O95298 119 aa12.4□□□□□ -0.42
CDKN1B-201ENST00000228872 TRAV23DV6A0A075B6W5 121 aa12.39□□□□□ -0.43
CDKN1B-201ENST00000228872 IGKV3OR2-268A0A0C4DH90 116 aa12.39□□□□□ -0.43
CDKN1B-201ENST00000228872 LY6G6DO95868 133 aa12.39□□□□□ -0.43
CDKN1B-201ENST00000228872 Q6ZTI0 123 aa12.39□□□□□ -0.43
CDKN1B-201ENST00000228872 TRBV6-4A0A1B0GX49 114 aa12.38□□□□□ -0.43
CDKN1B-201ENST00000228872 FAM19A1Q7Z5A9 133 aa12.38□□□□□ -0.43
CDKN1B-201ENST00000228872 RNASE1P07998 156 aaKnown RBP12.38□□□□□ -0.43
CDKN1B-201ENST00000228872 C1orf158Q8N1D5 194 aa12.38□□□□□ -0.43
CDKN1B-201ENST00000228872 SMR3AQ99954 134 aa12.38□□□□□ -0.43
CDKN1B-201ENST00000228872 LINC00167Q96N53 147 aa12.37□□□□□ -0.43
CDKN1B-201ENST00000228872 ACANP16112 2415 aa12.36□□□□□ -0.43
CDKN1B-201ENST00000228872 JMJD7-PLA2G4BH0Y9G9 81 aa12.36□□□□□ -0.43
CDKN1B-201ENST00000228872 ENHOQ6UWT2 76 aa12.36□□□□□ -0.43
CDKN1B-201ENST00000228872 IGHV3OR16-9A0A0B4J2B5 98 aa12.35□□□□□ -0.43
CDKN1B-201ENST00000228872 KHDC1LQ5JSQ8 128 aa12.35□□□□□ -0.43
CDKN1B-201ENST00000228872 LYPD5Q6UWN5 251 aa12.35□□□□□ -0.43
CDKN1B-201ENST00000228872 C20orf197Q8N268 126 aa12.34□□□□□ -0.43
CDKN1B-201ENST00000228872 DYNLRB2Q8TF09 96 aa12.34□□□□□ -0.43
CDKN1B-201ENST00000228872 C16orf95Q9H693 158 aa12.34□□□□□ -0.43
CDKN1B-201ENST00000228872 IGLV4-60A0A075B6I1 120 aa12.33□□□□□ -0.44
CDKN1B-201ENST00000228872 A0A087WZ39 114 aa12.33□□□□□ -0.44
CDKN1B-201ENST00000228872 LOC100131303A0A0U1RQF7 123 aa12.32□□□□□ -0.44
CDKN1B-201ENST00000228872 C4orf3Q8WVX3 66 aa12.32□□□□□ -0.44
CDKN1B-201ENST00000228872 OTOGQ6ZRI0 2925 aa12.32□□□□□ -0.44
CDKN1B-201ENST00000228872 TRBV10-3A0A0K0K1G6 114 aa12.32□□□□□ -0.44
CDKN1B-201ENST00000228872 FAM236DA0A1B0GTK5 79 aa12.32□□□□□ -0.44
CDKN1B-201ENST00000228872 FAM236CP0DP71 79 aa12.32□□□□□ -0.44
CDKN1B-201ENST00000228872 XCL1P47992 114 aa12.32□□□□□ -0.44
CDKN1B-201ENST00000228872 DEFB114Q30KQ6 69 aa12.31□□□□□ -0.44
CDKN1B-201ENST00000228872 Q8N814 137 aa12.31□□□□□ -0.44
CDKN1B-201ENST00000228872 WNK1Q9H4A3 2382 aa12.31□□□□□ -0.44
CDKN1B-201ENST00000228872 SETD2Q9BYW2 2564 aaPredicted RBP12.31□□□□□ -0.44
CDKN1B-201ENST00000228872 MTORP42345 2549 aa12.3□□□□□ -0.44
CDKN1B-201ENST00000228872 TMEM256-PLSCR3K7ERE1 68 aa12.3□□□□□ -0.44
CDKN1B-201ENST00000228872 ODF3L2Q3SX64 289 aa12.3□□□□□ -0.44
CDKN1B-201ENST00000228872 C11orf68Q9H3H3 251 aaKnown RBP12.3□□□□□ -0.44
CDKN1B-201ENST00000228872 NANOS2P60321 138 aaKnown RBP12.29□□□□□ -0.44
CDKN1B-201ENST00000228872 UBL5Q9BZL1 73 aa12.29□□□□□ -0.44
CDKN1B-201ENST00000228872 NOP10Q9NPE3 64 aaKnown RBP12.29□□□□□ -0.44
CDKN1B-201ENST00000228872 STHQ8IWL8 128 aa12.29□□□□□ -0.44
CDKN1B-201ENST00000228872 EPM2AB3EWF7 344 aa12.28□□□□□ -0.44
CDKN1B-201ENST00000228872 LINC01006Q8NI28 216 aa12.27□□□□□ -0.44
CDKN1B-201ENST00000228872 C6orf226Q5I0X4 101 aa12.26□□□□□ -0.45
CDKN1B-201ENST00000228872 H7BZZ5 65 aa12.25□□□□□ -0.45
CDKN1B-201ENST00000228872 MRAPQ8TCY5 172 aa12.25□□□□□ -0.45
CDKN1B-201ENST00000228872 SERP1Q9Y6X1 66 aa12.25□□□□□ -0.45
CDKN1B-201ENST00000228872 C11orf44Q8N8P7 122 aa12.25□□□□□ -0.45
CDKN1B-201ENST00000228872 HIVEP2P31629 2446 aa12.25□□□□□ -0.45
CDKN1B-201ENST00000228872 INAFM1C9JVW0 142 aa12.24□□□□□ -0.45
CDKN1B-201ENST00000228872 PRR3P79522 188 aaKnown RBP12.24□□□□□ -0.45
CDKN1B-201ENST00000228872 C2CD3Q4AC94 2353 aa12.24□□□□□ -0.45
CDKN1B-201ENST00000228872 TRBV6-8A0A0A6YYG3 113 aa12.24□□□□□ -0.45
CDKN1B-201ENST00000228872 TRAV7A0A075B6U4 112 aa12.24□□□□□ -0.45
CDKN1B-201ENST00000228872 NIPBLQ6KC79 2804 aaeCLIP12.23□□□□□ -0.45
CDKN1B-201ENST00000228872 TRGV2A0A075B6R0 118 aa12.23□□□□□ -0.45
CDKN1B-201ENST00000228872 LINC00959A0A1B0GUT2 108 aa12.23□□□□□ -0.45
CDKN1B-201ENST00000228872 A0A1W2PRX2 142 aa12.23□□□□□ -0.45
CDKN1B-201ENST00000228872 BCE1O60756 84 aa12.23□□□□□ -0.45
CDKN1B-201ENST00000228872 PLAC8L1A1L4L8 177 aa12.21□□□□□ -0.46
CDKN1B-201ENST00000228872 TRGV4A0A0C4DH28 118 aa12.2□□□□□ -0.46
CDKN1B-201ENST00000228872 Q6ZQT0 140 aa12.2□□□□□ -0.46
CDKN1B-201ENST00000228872 NOTCH2Q04721 2471 aa12.19□□□□□ -0.46
CDKN1B-201ENST00000228872 Q8IZM0 81 aa12.19□□□□□ -0.46
CDKN1B-201ENST00000228872 KLKP1Q107X0 134 aa12.18□□□□□ -0.46
CDKN1B-201ENST00000228872 LINC00482Q8N8I6 264 aa12.18□□□□□ -0.46
CDKN1B-201ENST00000228872 LINC01547P58512 204 aaPredicted RBP12.17□□□□□ -0.46
CDKN1B-201ENST00000228872 C16orf74Q96GX8 76 aa12.17□□□□□ -0.46
CDKN1B-201ENST00000228872 CCL24O00175 119 aa12.16□□□□□ -0.46
CDKN1B-201ENST00000228872 RBM3P98179 157 aaKnown RBP12.16□□□□□ -0.46
CDKN1B-201ENST00000228872 C6orf99Q4VX62 202 aa12.16□□□□□ -0.46
CDKN1B-201ENST00000228872 LINC00336Q6ZUF6 198 aa12.16□□□□□ -0.46
CDKN1B-201ENST00000228872 LOC110117498A0A087WWA1 95 aa12.16□□□□□ -0.46
CDKN1B-201ENST00000228872 TRAV10A0A0B4J240 114 aa12.16□□□□□ -0.46
CDKN1B-201ENST00000228872 M0R2N4 97 aa12.16□□□□□ -0.46
CDKN1B-201ENST00000228872 GIG44P09565 113 aaPredicted RBP12.15□□□□□ -0.46
CDKN1B-201ENST00000228872 PRO0628Q9UI54 55 aa12.15□□□□□ -0.46
CDKN1B-201ENST00000228872 SNURFQ9Y675 71 aa12.15□□□□□ -0.46
CDKN1B-201ENST00000228872 SETXQ7Z333 2677 aaKnown RBP12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms