RNA–Protein interactions for RNA: ENST00000226796.6

GAR1-201, Transcript of GAR1 ribonucleoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAR1, Length 1,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1-201ENST00000226796 PDZD11Q5EBL8 140 aa12.83□□□□□ -0.36
GAR1-201ENST00000226796 Q8IZM0 81 aa12.83□□□□□ -0.36
GAR1-201ENST00000226796 H3BRM9 83 aa12.81□□□□□ -0.36
GAR1-201ENST00000226796 GAGE2EQ4V326 116 aa12.81□□□□□ -0.36
GAR1-201ENST00000226796 GAGE2DQ9UEU5 116 aa12.81□□□□□ -0.36
GAR1-201ENST00000226796 FLG2Q5D862 2391 aaPredicted RBP12.8□□□□□ -0.36
GAR1-201ENST00000226796 IGLV5-45A0A087WSX0 123 aa12.8□□□□□ -0.36
GAR1-201ENST00000226796 TLX1NBP0CAT3 122 aa12.8□□□□□ -0.36
GAR1-201ENST00000226796 C9orf116Q5BN46 136 aaPredicted RBP12.8□□□□□ -0.36
GAR1-201ENST00000226796 Q6ZRP5 223 aa12.8□□□□□ -0.36
GAR1-201ENST00000226796 A0A1W2PNN7 141 aa12.79□□□□□ -0.36
GAR1-201ENST00000226796 COLCA2A8K830 154 aa12.79□□□□□ -0.36
GAR1-201ENST00000226796 SMIM1B2RUZ4 78 aa12.79□□□□□ -0.36
GAR1-201ENST00000226796 HSBP1O75506 76 aa12.79□□□□□ -0.36
GAR1-201ENST00000226796 SPINK8P0C7L1 97 aa12.79□□□□□ -0.36
GAR1-201ENST00000226796 COX7B2Q8TF08 81 aa12.78□□□□□ -0.36
GAR1-201ENST00000226796 NDUFC2-KCTD14E9PQ53 114 aa12.77□□□□□ -0.37
GAR1-201ENST00000226796 IGLC3P0DOY3 106 aa12.77□□□□□ -0.37
GAR1-201ENST00000226796 F8VRH5 84 aa12.76□□□□□ -0.37
GAR1-201ENST00000226796 CXCL5P42830 114 aa12.76□□□□□ -0.37
GAR1-201ENST00000226796 FAM19A2Q8N3H0 131 aa12.75□□□□□ -0.37
GAR1-201ENST00000226796 J3QL48 77 aa12.74□□□□□ -0.37
GAR1-201ENST00000226796 IFI27L1Q96BM0 104 aa12.74□□□□□ -0.37
GAR1-201ENST00000226796 CHTOPQ9Y3Y2 248 aaKnown RBP12.74□□□□□ -0.37
GAR1-201ENST00000226796 HNRNPA3P51991 378 aaKnown RBP12.73□□□□□ -0.37
GAR1-201ENST00000226796 FAM168BA1KXE4 195 aa12.72□□□□□ -0.37
GAR1-201ENST00000226796 SCO1O75880 301 aa12.72□□□□□ -0.37
GAR1-201ENST00000226796 ZNF22P17026 224 aaPredicted RBP12.72□□□□□ -0.37
GAR1-201ENST00000226796 PRR3P79522 188 aaKnown RBP12.72□□□□□ -0.37
GAR1-201ENST00000226796 TMEM170BQ5T4T1 132 aa12.72□□□□□ -0.37
GAR1-201ENST00000226796 SERF1AO75920 110 aa12.71□□□□□ -0.37
GAR1-201ENST00000226796 PHF5AQ7RTV0 110 aaKnown RBP12.71□□□□□ -0.37
GAR1-201ENST00000226796 FAM19A5Q7Z5A7 132 aaPredicted RBP12.71□□□□□ -0.37
GAR1-201ENST00000226796 MYCBP2O75592 4640 aa12.71□□□□□ -0.38
GAR1-201ENST00000226796 C11orf86A6NJI1 115 aa12.7□□□□□ -0.38
GAR1-201ENST00000226796 TRAV12-1A0A0B4J245 112 aa12.69□□□□□ -0.38
GAR1-201ENST00000226796 KRTAP29-1A8MX34 341 aaPredicted RBP12.68□□□□□ -0.38
GAR1-201ENST00000226796 LEPROTL1O95214 131 aa12.68□□□□□ -0.38
GAR1-201ENST00000226796 C9orf129Q5T035 196 aaKnown RBP12.68□□□□□ -0.38
GAR1-201ENST00000226796 H0Y8G0 127 aa12.67□□□□□ -0.38
GAR1-201ENST00000226796 XAGE1AQ9HD64 81 aa12.67□□□□□ -0.38
GAR1-201ENST00000226796 DMBT1Q9UGM3 2413 aaPredicted RBP12.66□□□□□ -0.38
GAR1-201ENST00000226796 IGLV5-39A0A0G2JS06 123 aa12.66□□□□□ -0.38
GAR1-201ENST00000226796 OXTP01178 125 aa12.65□□□□□ -0.38
GAR1-201ENST00000226796 M0QXV9 152 aa12.64□□□□□ -0.39
GAR1-201ENST00000226796 NUPR1O60356 82 aa12.64□□□□□ -0.39
GAR1-201ENST00000226796 FABP4P15090 132 aa12.64□□□□□ -0.39
GAR1-201ENST00000226796 LINC00310P59036 64 aa12.64□□□□□ -0.39
GAR1-201ENST00000226796 HSPB8Q9UJY1 196 aa12.64□□□□□ -0.39
GAR1-201ENST00000226796 PSORS1C2Q9UIG4 136 aa12.63□□□□□ -0.39
GAR1-201ENST00000226796 UBE2BP63146 152 aa12.62□□□□□ -0.39
GAR1-201ENST00000226796 PFN2P35080 140 aa12.61□□□□□ -0.39
GAR1-201ENST00000226796 C1orf137Q5JT78 98 aa12.61□□□□□ -0.39
GAR1-201ENST00000226796 KRTAP7-1Q8IUC3 87 aa12.61□□□□□ -0.39
GAR1-201ENST00000226796 TMEM223A0PJW6 202 aa12.6□□□□□ -0.39
GAR1-201ENST00000226796 HIST1H2BKO60814 126 aa12.59□□□□□ -0.39
GAR1-201ENST00000226796 HIST1H2BJP06899 126 aa12.59□□□□□ -0.39
GAR1-201ENST00000226796 HIST1H2BOP23527 126 aa12.59□□□□□ -0.39
GAR1-201ENST00000226796 HIST1H2BBP33778 126 aa12.59□□□□□ -0.39
GAR1-201ENST00000226796 HIST1H2BDP58876 126 aa12.59□□□□□ -0.39
GAR1-201ENST00000226796 HIST1H2BCP62807 126 aa12.59□□□□□ -0.39
GAR1-201ENST00000226796 HIST2H2BEQ16778 126 aa12.59□□□□□ -0.39
GAR1-201ENST00000226796 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.59□□□□□ -0.39
GAR1-201ENST00000226796 SERTAD4-AS1Q5TG53 156 aa12.59□□□□□ -0.39
GAR1-201ENST00000226796 SFTA2Q6UW10 78 aa12.59□□□□□ -0.39
GAR1-201ENST00000226796 SPINK6Q6UWN8 80 aa12.59□□□□□ -0.39
GAR1-201ENST00000226796 HIST1H2BHQ93079 126 aa12.59□□□□□ -0.39
GAR1-201ENST00000226796 ZNF625Q96I27 306 aaPredicted RBP12.59□□□□□ -0.39
GAR1-201ENST00000226796 HIST1H2BNQ99877 126 aa12.59□□□□□ -0.39
GAR1-201ENST00000226796 HIST1H2BMQ99879 126 aa12.59□□□□□ -0.39
GAR1-201ENST00000226796 ODF1Q14990 250 aa12.58□□□□□ -0.4
GAR1-201ENST00000226796 C22orf24Q9Y442 160 aa12.58□□□□□ -0.4
GAR1-201ENST00000226796 PKHD1L1Q86WI1 4243 aa12.57□□□□□ -0.4
GAR1-201ENST00000226796 LBHQ53QV2 105 aaPredicted RBP12.57□□□□□ -0.4
GAR1-201ENST00000226796 ERG28Q9UKR5 140 aa12.57□□□□□ -0.4
GAR1-201ENST00000226796 LRP1Q07954 4544 aaKnown RBP12.56□□□□□ -0.4
GAR1-201ENST00000226796 SRSF9Q13242 221 aaKnown RBP eCLIP12.55□□□□□ -0.4
GAR1-201ENST00000226796 KRTAP11-1Q8IUC1 163 aa12.55□□□□□ -0.4
GAR1-201ENST00000226796 MAP1LC3CQ9BXW4 147 aa12.55□□□□□ -0.4
GAR1-201ENST00000226796 COX17Q14061 63 aa12.54□□□□□ -0.4
GAR1-201ENST00000226796 PLNP26678 52 aa12.53□□□□□ -0.4
GAR1-201ENST00000226796 REG3GQ6UW15 175 aa12.53□□□□□ -0.4
GAR1-201ENST00000226796 DPM2O94777 84 aa12.52□□□□□ -0.41
GAR1-201ENST00000226796 IGLV7-43P04211 117 aa12.52□□□□□ -0.41
GAR1-201ENST00000226796 MRPL55Q7Z7F7 128 aaKnown RBP12.52□□□□□ -0.41
GAR1-201ENST00000226796 HERC1Q15751 4861 aa12.52□□□□□ -0.41
GAR1-201ENST00000226796 FAT3Q8TDW7 4589 aa12.51□□□□□ -0.41
GAR1-201ENST00000226796 LINC00158P58513 81 aa12.51□□□□□ -0.41
GAR1-201ENST00000226796 NKAPP1Q8N9T2 125 aa12.51□□□□□ -0.41
GAR1-201ENST00000226796 PMCHL2Q9BQD1 86 aa12.51□□□□□ -0.41
GAR1-201ENST00000226796 TP73-AS1Q9UF72 201 aa12.51□□□□□ -0.41
GAR1-201ENST00000226796 PLA2G2DQ9UNK4 145 aa12.51□□□□□ -0.41
GAR1-201ENST00000226796 SND1-IT1Q9HBX3 110 aa12.5□□□□□ -0.41
GAR1-201ENST00000226796 A0A0U1RRA0 63 aa12.49□□□□□ -0.41
GAR1-201ENST00000226796 ATP6V1G1O75348 118 aa12.49□□□□□ -0.41
GAR1-201ENST00000226796 IGKCP01834 107 aa12.49□□□□□ -0.41
GAR1-201ENST00000226796 S100A1P23297 94 aa12.49□□□□□ -0.41
GAR1-201ENST00000226796 GAGE10A6NGK3 116 aa12.48□□□□□ -0.41
GAR1-201ENST00000226796 HERVK_113P61574 105 aa12.48□□□□□ -0.41
GAR1-201ENST00000226796 MEIG1Q5JSS6 88 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms