RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 GAGE2DQ9UEU5 116 aa15.17■□□□□ 0.02
SMARCD2-201ENST00000225742 PFN2P35080 140 aa15.17■□□□□ 0.02
SMARCD2-201ENST00000225742 CD164L2Q6UWJ8 174 aa15.17■□□□□ 0.02
SMARCD2-201ENST00000225742 C15orf53Q8NAA6 179 aa15.17■□□□□ 0.02
SMARCD2-201ENST00000225742 SPATA3Q8NHX4 192 aa15.17■□□□□ 0.02
SMARCD2-201ENST00000225742 CXCL5P42830 114 aa15.16■□□□□ 0.02
SMARCD2-201ENST00000225742 FAM218AQ96MZ4 157 aa15.16■□□□□ 0.02
SMARCD2-201ENST00000225742 CUBNO60494 3623 aa15.15■□□□□ 0.02
SMARCD2-201ENST00000225742 ATP5G1P05496 136 aa15.15■□□□□ 0.02
SMARCD2-201ENST00000225742 SMIM11BQ8TCY0 68 aa15.15■□□□□ 0.02
SMARCD2-201ENST00000225742 A0A096LPF7 62 aa15.13■□□□□ 0.01
SMARCD2-201ENST00000225742 Q8NAQ8 132 aa15.13■□□□□ 0.01
SMARCD2-201ENST00000225742 COX17Q14061 63 aa15.13■□□□□ 0.01
SMARCD2-201ENST00000225742 LINC00269Q8N2A0 174 aa15.12■□□□□ 0.01
SMARCD2-201ENST00000225742 WFDC9Q8NEX5 89 aa15.12■□□□□ 0.01
SMARCD2-201ENST00000225742 WIPF1O43516 503 aa15.11■□□□□ 0.01
SMARCD2-201ENST00000225742 SPART-AS1P0CW21 52 aa15.11■□□□□ 0.01
SMARCD2-201ENST00000225742 INAFM2P0DMQ5 153 aa15.11■□□□□ 0.01
SMARCD2-201ENST00000225742 CFAP161Q6P656 301 aa15.1■□□□□ 0.01
SMARCD2-201ENST00000225742 CLPSL2Q6UWE3 100 aa15.1■□□□□ 0.01
SMARCD2-201ENST00000225742 CHCHD10Q8WYQ3 142 aaPredicted RBP15.1■□□□□ 0.01
SMARCD2-201ENST00000225742 MALP21145 153 aa15.1■□□□□ 0.01
SMARCD2-201ENST00000225742 REG3AQ06141 175 aa15.1■□□□□ 0.01
SMARCD2-201ENST00000225742 HELZ2Q9BYK8 2649 aaKnown RBP15.09■□□□□ 0.01
SMARCD2-201ENST00000225742 DEFB4AO15263 64 aa15.09■□□□□ 0.01
SMARCD2-201ENST00000225742 KIAA0087Q14695 138 aa15.09■□□□□ 0.01
SMARCD2-201ENST00000225742 C11orf68Q9H3H3 251 aaKnown RBP15.09■□□□□ 0.01
SMARCD2-201ENST00000225742 C22orf24Q9Y442 160 aa15.09■□□□□ 0.01
SMARCD2-201ENST00000225742 DNAL4O96015 105 aa15.08■□□□□ 0.01
SMARCD2-201ENST00000225742 ANGP03950 147 aaKnown RBP15.08■□□□□ 0.01
SMARCD2-201ENST00000225742 NIPBLQ6KC79 2804 aaeCLIP15.08■□□□□ 0
SMARCD2-201ENST00000225742 NDUFC2O95298 119 aa15.08■□□□□ 0
SMARCD2-201ENST00000225742 LELP1Q5T871 98 aa15.07■□□□□ 0
SMARCD2-201ENST00000225742 ANAPC13Q9BS18 74 aa15.07■□□□□ 0
SMARCD2-201ENST00000225742 FASNP49327 2511 aaKnown RBP15.07■□□□□ 0
SMARCD2-201ENST00000225742 OR13C6PQ8NH95 151 aa15.06■□□□□ 0
SMARCD2-201ENST00000225742 CELA1Q9UNI1 258 aa15.06■□□□□ 0
SMARCD2-201ENST00000225742 MUC7Q8TAX7 377 aa15.05■□□□□ -0
SMARCD2-201ENST00000225742 TTC32Q5I0X7 151 aa15.04■□□□□ -0
SMARCD2-201ENST00000225742 Q9HAA7 133 aa15.04■□□□□ -0
SMARCD2-201ENST00000225742 A0A087WYN8 130 aa15.03■□□□□ -0
SMARCD2-201ENST00000225742 TRBV7-7A0A0K0K1E9 115 aa15.03■□□□□ -0
SMARCD2-201ENST00000225742 NDUFV3P56181 108 aaKnown RBP15.03■□□□□ -0
SMARCD2-201ENST00000225742 KLK5Q9Y337 293 aaPredicted RBP15.03■□□□□ -0
SMARCD2-201ENST00000225742 A0A1B0GX51 115 aa15.01□□□□□ -0.01
SMARCD2-201ENST00000225742 IGHV4-30-4P0DP06 118 aa15.01□□□□□ -0.01
SMARCD2-201ENST00000225742 SDIM1Q6ZPB5 146 aa15□□□□□ -0.01
SMARCD2-201ENST00000225742 IMUPQ9GZP8 106 aa15□□□□□ -0.01
SMARCD2-201ENST00000225742 FN1P02751 2386 aaKnown RBP14.99□□□□□ -0.01
SMARCD2-201ENST00000225742 LINC00643Q86TS7 51 aa14.99□□□□□ -0.01
SMARCD2-201ENST00000225742 OBSCN-AS1Q96MR7 158 aa14.99□□□□□ -0.01
SMARCD2-201ENST00000225742 IGLV10-54A0A075B6I4 117 aa14.98□□□□□ -0.01
SMARCD2-201ENST00000225742 LECT2O14960 151 aa14.98□□□□□ -0.01
SMARCD2-201ENST00000225742 PRR34Q9NV39 138 aa14.98□□□□□ -0.01
SMARCD2-201ENST00000225742 Q8N3U1 123 aa14.97□□□□□ -0.01
SMARCD2-201ENST00000225742 TMEM126AQ9H061 195 aa14.97□□□□□ -0.01
SMARCD2-201ENST00000225742 HTN3P15516 51 aa14.96□□□□□ -0.01
SMARCD2-201ENST00000225742 LINC00167Q96N53 147 aa14.96□□□□□ -0.01
SMARCD2-201ENST00000225742 NHLRC4P0CG21 123 aaPredicted RBP14.95□□□□□ -0.02
SMARCD2-201ENST00000225742 NANOS2P60321 138 aaKnown RBP14.94□□□□□ -0.02
SMARCD2-201ENST00000225742 ORMDL1Q9P0S3 153 aa14.94□□□□□ -0.02
SMARCD2-201ENST00000225742 SPAG11BQ08648 103 aa14.93□□□□□ -0.02
SMARCD2-201ENST00000225742 A0A0J9YWU9 116 aa14.92□□□□□ -0.02
SMARCD2-201ENST00000225742 H3BNG1 76 aa14.92□□□□□ -0.02
SMARCD2-201ENST00000225742 GAGE2AQ6NT46 116 aa14.92□□□□□ -0.02
SMARCD2-201ENST00000225742 LYPD5Q6UWN5 251 aa14.91□□□□□ -0.02
SMARCD2-201ENST00000225742 SMCR5Q8TEV8 140 aa14.9□□□□□ -0.02
SMARCD2-201ENST00000225742 KLK12Q9UKR0 248 aa14.89□□□□□ -0.03
SMARCD2-201ENST00000225742 GCN1Q92616 2671 aaKnown RBP14.89□□□□□ -0.03
SMARCD2-201ENST00000225742 GVQW2A0A096LPI5 108 aaPredicted RBP14.89□□□□□ -0.03
SMARCD2-201ENST00000225742 C9orf116Q5BN46 136 aaPredicted RBP14.88□□□□□ -0.03
SMARCD2-201ENST00000225742 ENHOQ6UWT2 76 aa14.88□□□□□ -0.03
SMARCD2-201ENST00000225742 NOTCH2Q04721 2471 aa14.87□□□□□ -0.03
SMARCD2-201ENST00000225742 PRR3P79522 188 aaKnown RBP14.87□□□□□ -0.03
SMARCD2-201ENST00000225742 Q8N814 137 aa14.87□□□□□ -0.03
SMARCD2-201ENST00000225742 UNQ6190/PRO20217Q6UXQ8 127 aa14.87□□□□□ -0.03
SMARCD2-201ENST00000225742 NSD1Q96L73 2696 aaPredicted RBP14.86□□□□□ -0.03
SMARCD2-201ENST00000225742 CYSRT1A8MQ03 144 aa14.85□□□□□ -0.03
SMARCD2-201ENST00000225742 C14orf132Q9NPU4 83 aa14.85□□□□□ -0.03
SMARCD2-201ENST00000225742 S100A7L2Q5SY68 101 aa14.84□□□□□ -0.03
SMARCD2-201ENST00000225742 C10orf25Q5T742 122 aa14.84□□□□□ -0.03
SMARCD2-201ENST00000225742 C6orf223Q8N319 242 aa14.84□□□□□ -0.03
SMARCD2-201ENST00000225742 JMJD7-PLA2G4BH0Y9G9 81 aa14.83□□□□□ -0.04
SMARCD2-201ENST00000225742 TMEM256-PLSCR3K7ERE1 68 aa14.83□□□□□ -0.04
SMARCD2-201ENST00000225742 SLPIP03973 132 aa14.83□□□□□ -0.04
SMARCD2-201ENST00000225742 C9orf129Q5T035 196 aaKnown RBP14.82□□□□□ -0.04
SMARCD2-201ENST00000225742 OTOGQ6ZRI0 2925 aa14.82□□□□□ -0.04
SMARCD2-201ENST00000225742 NCR3O14931 201 aa14.82□□□□□ -0.04
SMARCD2-201ENST00000225742 HECTD1Q9ULT8 2610 aa14.8□□□□□ -0.04
SMARCD2-201ENST00000225742 NBEAL2Q6ZNJ1 2754 aa14.8□□□□□ -0.04
SMARCD2-201ENST00000225742 VWFP04275 2813 aa14.8□□□□□ -0.04
SMARCD2-201ENST00000225742 KPRPQ5T749 579 aaPredicted RBP14.8□□□□□ -0.04
SMARCD2-201ENST00000225742 Q8NDZ9 215 aa14.8□□□□□ -0.04
SMARCD2-201ENST00000225742 C6orf99Q4VX62 202 aa14.79□□□□□ -0.04
SMARCD2-201ENST00000225742 IGLV6-57P01721 117 aa14.78□□□□□ -0.04
SMARCD2-201ENST00000225742 EGFEM1PQ0D2K5 195 aa14.78□□□□□ -0.04
SMARCD2-201ENST00000225742 LINC00575Q6W349 94 aa14.78□□□□□ -0.04
SMARCD2-201ENST00000225742 CCKP06307 115 aa14.77□□□□□ -0.05
SMARCD2-201ENST00000225742 KRTAP10-11P60412 298 aa14.77□□□□□ -0.05
SMARCD2-201ENST00000225742 OXLD1Q5BKU9 147 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms