RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 IGKV2-24A0A0C4DH68 120 aa9.15□□□□□ -0.94
SUPT4H1-201ENST00000225504 C11orf86A6NJI1 115 aa9.15□□□□□ -0.94
SUPT4H1-201ENST00000225504 NDUFA1O15239 70 aa9.15□□□□□ -0.94
SUPT4H1-201ENST00000225504 LEPROTL1O95214 131 aa9.15□□□□□ -0.94
SUPT4H1-201ENST00000225504 ZNF22P17026 224 aaPredicted RBP9.15□□□□□ -0.94
SUPT4H1-201ENST00000225504 DPH3Q96FX2 82 aa9.15□□□□□ -0.94
SUPT4H1-201ENST00000225504 PACRGQ96M98 296 aaPredicted RBP9.15□□□□□ -0.94
SUPT4H1-201ENST00000225504 C6orf48Q9UBA6 75 aa9.15□□□□□ -0.94
SUPT4H1-201ENST00000225504 CHTOPQ9Y3Y2 248 aaKnown RBP9.15□□□□□ -0.94
SUPT4H1-201ENST00000225504 C6orf226Q5I0X4 101 aa9.15□□□□□ -0.95
SUPT4H1-201ENST00000225504 SPACA4Q8TDM5 124 aa9.15□□□□□ -0.95
SUPT4H1-201ENST00000225504 MRPL35Q9NZE8 188 aaKnown RBP9.15□□□□□ -0.95
SUPT4H1-201ENST00000225504 A0A087WYN8 130 aa9.14□□□□□ -0.95
SUPT4H1-201ENST00000225504 TRAV12-1A0A0B4J245 112 aa9.14□□□□□ -0.95
SUPT4H1-201ENST00000225504 LOC105371267A0A1B0GV96 52 aa9.14□□□□□ -0.95
SUPT4H1-201ENST00000225504 F8WDY8 70 aa9.14□□□□□ -0.95
SUPT4H1-201ENST00000225504 RNF151Q2KHN1 245 aa9.14□□□□□ -0.95
SUPT4H1-201ENST00000225504 MAJINQ3KP22 176 aa9.14□□□□□ -0.95
SUPT4H1-201ENST00000225504 Q8IZM0 81 aa9.14□□□□□ -0.95
SUPT4H1-201ENST00000225504 LOC107984640A0A0U1RRK4 108 aa9.13□□□□□ -0.95
SUPT4H1-201ENST00000225504 H0Y8G0 127 aa9.13□□□□□ -0.95
SUPT4H1-201ENST00000225504 PRSS2P07478 247 aa9.13□□□□□ -0.95
SUPT4H1-201ENST00000225504 GAGE2BQ13066 116 aa9.13□□□□□ -0.95
SUPT4H1-201ENST00000225504 C9orf116Q5BN46 136 aaPredicted RBP9.13□□□□□ -0.95
SUPT4H1-201ENST00000225504 FAT1Q14517 4588 aa9.12□□□□□ -0.95
SUPT4H1-201ENST00000225504 H3BRM9 83 aa9.11□□□□□ -0.95
SUPT4H1-201ENST00000225504 PTTG1IPP53801 180 aa9.11□□□□□ -0.95
SUPT4H1-201ENST00000225504 CKS1BP61024 79 aa9.11□□□□□ -0.95
SUPT4H1-201ENST00000225504 TMEM170BQ5T4T1 132 aa9.11□□□□□ -0.95
SUPT4H1-201ENST00000225504 COX7B2Q8TF08 81 aa9.11□□□□□ -0.95
SUPT4H1-201ENST00000225504 IGLV5-39A0A0G2JS06 123 aa9.1□□□□□ -0.95
SUPT4H1-201ENST00000225504 EPM2AB3EWF7 344 aa9.1□□□□□ -0.95
SUPT4H1-201ENST00000225504 ODF1Q14990 250 aa9.1□□□□□ -0.95
SUPT4H1-201ENST00000225504 COA6Q5JTJ3 125 aaKnown RBP9.1□□□□□ -0.95
SUPT4H1-201ENST00000225504 Q5VSD8 79 aa9.1□□□□□ -0.95
SUPT4H1-201ENST00000225504 LINC00528Q8N1L1 170 aa9.1□□□□□ -0.95
SUPT4H1-201ENST00000225504 STPG4Q8N801 248 aa9.1□□□□□ -0.95
SUPT4H1-201ENST00000225504 HSPB8Q9UJY1 196 aa9.1□□□□□ -0.95
SUPT4H1-201ENST00000225504 ABCA13Q86UQ4 5058 aa9.1□□□□□ -0.95
SUPT4H1-201ENST00000225504 PCLOQ9Y6V0 5065 aa9.09□□□□□ -0.95
SUPT4H1-201ENST00000225504 F8VRH5 84 aa9.09□□□□□ -0.95
SUPT4H1-201ENST00000225504 RPL18AQ02543 176 aaKnown RBP9.09□□□□□ -0.95
SUPT4H1-201ENST00000225504 Q6ZRP5 223 aa9.09□□□□□ -0.95
SUPT4H1-201ENST00000225504 PMCHL2Q9BQD1 86 aa9.09□□□□□ -0.95
SUPT4H1-201ENST00000225504 PLAC8Q9NZF1 115 aa9.09□□□□□ -0.95
SUPT4H1-201ENST00000225504 TRBV30A0A0K0K1B3 111 aa9.08□□□□□ -0.96
SUPT4H1-201ENST00000225504 A0A1W2PNN7 141 aa9.08□□□□□ -0.96
SUPT4H1-201ENST00000225504 FAM229AH3BQW9 127 aa9.08□□□□□ -0.96
SUPT4H1-201ENST00000225504 TLX1NBP0CAT3 122 aa9.08□□□□□ -0.96
SUPT4H1-201ENST00000225504 TMEM223A0PJW6 202 aa9.07□□□□□ -0.96
SUPT4H1-201ENST00000225504 GAGE2EQ4V326 116 aa9.07□□□□□ -0.96
SUPT4H1-201ENST00000225504 LINC00474Q9P2X8 69 aa9.07□□□□□ -0.96
SUPT4H1-201ENST00000225504 GAGE2DQ9UEU5 116 aa9.07□□□□□ -0.96
SUPT4H1-201ENST00000225504 SRRM2Q9UQ35 2752 aaKnown RBP9.06□□□□□ -0.96
SUPT4H1-201ENST00000225504 PKIGQ9Y2B9 76 aa9.06□□□□□ -0.96
SUPT4H1-201ENST00000225504 MAP1LC3CQ9BXW4 147 aa9.05□□□□□ -0.96
SUPT4H1-201ENST00000225504 FAM168BA1KXE4 195 aa9.04□□□□□ -0.96
SUPT4H1-201ENST00000225504 NDUFC2-KCTD14E9PQ53 114 aa9.04□□□□□ -0.96
SUPT4H1-201ENST00000225504 LCE2BO14633 110 aa9.04□□□□□ -0.96
SUPT4H1-201ENST00000225504 KRTAP10-4P60372 401 aaPredicted RBP9.04□□□□□ -0.96
SUPT4H1-201ENST00000225504 SYS1-DBNDD2H3BUS1 97 aa9.03□□□□□ -0.96
SUPT4H1-201ENST00000225504 CXCL5P42830 114 aa9.03□□□□□ -0.96
SUPT4H1-201ENST00000225504 KRTAP7-1Q8IUC3 87 aa9.03□□□□□ -0.96
SUPT4H1-201ENST00000225504 C9orf129Q5T035 196 aaKnown RBP9.02□□□□□ -0.96
SUPT4H1-201ENST00000225504 DPM2O94777 84 aa9.02□□□□□ -0.97
SUPT4H1-201ENST00000225504 C3orf79P0CE67 100 aa9.02□□□□□ -0.97
SUPT4H1-201ENST00000225504 ZNF625Q96I27 306 aaPredicted RBP9.02□□□□□ -0.97
SUPT4H1-201ENST00000225504 IGKCP01834 107 aa9.01□□□□□ -0.97
SUPT4H1-201ENST00000225504 PLA2G1BP04054 148 aaKnown RBP9.01□□□□□ -0.97
SUPT4H1-201ENST00000225504 PLNP26678 52 aa9.01□□□□□ -0.97
SUPT4H1-201ENST00000225504 XAGE1AQ9HD64 81 aa9.01□□□□□ -0.97
SUPT4H1-201ENST00000225504 VPS13BQ7Z7G8 4022 aa9□□□□□ -0.97
SUPT4H1-201ENST00000225504 RPL37AP61513 92 aaKnown RBP9□□□□□ -0.97
SUPT4H1-201ENST00000225504 S100A12P80511 92 aa9□□□□□ -0.97
SUPT4H1-201ENST00000225504 PFN2P35080 140 aa8.99□□□□□ -0.97
SUPT4H1-201ENST00000225504 PHF5AQ7RTV0 110 aaKnown RBP8.99□□□□□ -0.97
SUPT4H1-201ENST00000225504 INAFM2P0DMQ5 153 aa8.98□□□□□ -0.97
SUPT4H1-201ENST00000225504 TSPEAR-AS2P59090 65 aa8.98□□□□□ -0.97
SUPT4H1-201ENST00000225504 KRTDAPP60985 99 aa8.98□□□□□ -0.97
SUPT4H1-201ENST00000225504 LINC01545Q5VT33 79 aa8.98□□□□□ -0.97
SUPT4H1-201ENST00000225504 PET117Q6UWS5 81 aa8.98□□□□□ -0.97
SUPT4H1-201ENST00000225504 FAM19A5Q7Z5A7 132 aaPredicted RBP8.98□□□□□ -0.97
SUPT4H1-201ENST00000225504 HIST3H2BBQ8N257 126 aa8.98□□□□□ -0.97
SUPT4H1-201ENST00000225504 LEPROTO15243 131 aa8.96□□□□□ -0.97
SUPT4H1-201ENST00000225504 SERTAD4-AS1Q5TG53 156 aa8.96□□□□□ -0.97
SUPT4H1-201ENST00000225504 ERG28Q9UKR5 140 aa8.96□□□□□ -0.97
SUPT4H1-201ENST00000225504 CBY1Q9Y3M2 126 aa8.96□□□□□ -0.97
SUPT4H1-201ENST00000225504 HNRNPA3P51991 378 aaKnown RBP8.96□□□□□ -0.98
SUPT4H1-201ENST00000225504 KRTAP11-1Q8IUC1 163 aa8.96□□□□□ -0.98
SUPT4H1-201ENST00000225504 C7orf33Q8WU49 177 aa8.96□□□□□ -0.98
SUPT4H1-201ENST00000225504 SNRPEP62304 92 aaKnown RBP8.95□□□□□ -0.98
SUPT4H1-201ENST00000225504 A0A0U1RRA0 63 aa8.94□□□□□ -0.98
SUPT4H1-201ENST00000225504 HIST1H2BLQ99880 126 aa8.94□□□□□ -0.98
SUPT4H1-201ENST00000225504 NDUFA12Q9UI09 145 aa8.94□□□□□ -0.98
SUPT4H1-201ENST00000225504 J3QQQ9 107 aa8.93□□□□□ -0.98
SUPT4H1-201ENST00000225504 PLEKHB2Q96CS7 222 aa8.93□□□□□ -0.98
SUPT4H1-201ENST00000225504 SND1-IT1Q9HBX3 110 aa8.93□□□□□ -0.98
SUPT4H1-201ENST00000225504 FLG2Q5D862 2391 aaPredicted RBP8.92□□□□□ -0.98
SUPT4H1-201ENST00000225504 M0QXV9 152 aa8.92□□□□□ -0.98
SUPT4H1-201ENST00000225504 SMIM13P0DJ93 91 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms