RNA–Protein interactions for RNA: ENST00000225308.12

SLC25A39-201, Transcript of solute carrier family 25 member 39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC25A39, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-201ENST00000225308 AKR1D1P51857 326 aa13.96□□□□□ -0.17
SLC25A39-201ENST00000225308 KIAA0087Q14695 138 aa13.96□□□□□ -0.17
SLC25A39-201ENST00000225308 Q6ZRU5 148 aa13.96□□□□□ -0.17
SLC25A39-201ENST00000225308 CAMK2N2Q96S95 79 aa13.96□□□□□ -0.17
SLC25A39-201ENST00000225308 SCGB1D1O95968 90 aa13.95□□□□□ -0.18
SLC25A39-201ENST00000225308 KRTAP17-1Q9BYP8 105 aa13.94□□□□□ -0.18
SLC25A39-201ENST00000225308 PANO1I0J062 215 aa13.93□□□□□ -0.18
SLC25A39-201ENST00000225308 ZNF22P17026 224 aaPredicted RBP13.93□□□□□ -0.18
SLC25A39-201ENST00000225308 TMEM170BQ5T4T1 132 aa13.93□□□□□ -0.18
SLC25A39-201ENST00000225308 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.93□□□□□ -0.18
SLC25A39-201ENST00000225308 JOSD1Q15040 202 aaPredicted RBP13.93□□□□□ -0.18
SLC25A39-201ENST00000225308 SMIM1B2RUZ4 78 aa13.92□□□□□ -0.18
SLC25A39-201ENST00000225308 SCXQ7RTU7 201 aa13.92□□□□□ -0.18
SLC25A39-201ENST00000225308 F8WDY8 70 aa13.9□□□□□ -0.18
SLC25A39-201ENST00000225308 H3BRM9 83 aa13.9□□□□□ -0.18
SLC25A39-201ENST00000225308 CIRBPQ14011 172 aaKnown RBP13.9□□□□□ -0.18
SLC25A39-201ENST00000225308 C10orf25Q5T742 122 aa13.9□□□□□ -0.18
SLC25A39-201ENST00000225308 NDUFA1O15239 70 aa13.9□□□□□ -0.19
SLC25A39-201ENST00000225308 CHTF8P0CG12 524 aa13.9□□□□□ -0.19
SLC25A39-201ENST00000225308 Q8IZM0 81 aa13.9□□□□□ -0.19
SLC25A39-201ENST00000225308 ATOH7Q8N100 152 aa13.9□□□□□ -0.19
SLC25A39-201ENST00000225308 TOMM7Q9P0U1 55 aa13.9□□□□□ -0.19
SLC25A39-201ENST00000225308 PYY3Q5JQD4 70 aa13.89□□□□□ -0.19
SLC25A39-201ENST00000225308 C2orf82Q6UX34 121 aa13.89□□□□□ -0.19
SLC25A39-201ENST00000225308 UNQ6190/PRO20217Q6UXQ8 127 aa13.89□□□□□ -0.19
SLC25A39-201ENST00000225308 CIRBP-AS1Q8TBR5 109 aa13.89□□□□□ -0.19
SLC25A39-201ENST00000225308 SPINK8P0C7L1 97 aa13.88□□□□□ -0.19
SLC25A39-201ENST00000225308 RNF151Q2KHN1 245 aa13.87□□□□□ -0.19
SLC25A39-201ENST00000225308 A0A096LNI7 61 aa13.86□□□□□ -0.19
SLC25A39-201ENST00000225308 TMEM223A0PJW6 202 aa13.86□□□□□ -0.19
SLC25A39-201ENST00000225308 PRSS2P07478 247 aa13.86□□□□□ -0.19
SLC25A39-201ENST00000225308 SPACA4Q8TDM5 124 aa13.86□□□□□ -0.19
SLC25A39-201ENST00000225308 C6orf48Q9UBA6 75 aa13.86□□□□□ -0.19
SLC25A39-201ENST00000225308 FAT1Q14517 4588 aa13.86□□□□□ -0.19
SLC25A39-201ENST00000225308 IGKV2-24A0A0C4DH68 120 aa13.85□□□□□ -0.19
SLC25A39-201ENST00000225308 SMR3BP02814 79 aaPredicted RBP13.85□□□□□ -0.19
SLC25A39-201ENST00000225308 C6orf226Q5I0X4 101 aa13.85□□□□□ -0.19
SLC25A39-201ENST00000225308 SRRM2Q9UQ35 2752 aaKnown RBP13.85□□□□□ -0.19
SLC25A39-201ENST00000225308 Q8N1X5 172 aa13.84□□□□□ -0.19
SLC25A39-201ENST00000225308 STPG4Q8N801 248 aa13.84□□□□□ -0.19
SLC25A39-201ENST00000225308 PKIGQ9Y2B9 76 aa13.84□□□□□ -0.19
SLC25A39-201ENST00000225308 IGLV5-39A0A0G2JS06 123 aa13.83□□□□□ -0.2
SLC25A39-201ENST00000225308 LOC107984640A0A0U1RRK4 108 aa13.83□□□□□ -0.2
SLC25A39-201ENST00000225308 HERVK_113P61574 105 aa13.83□□□□□ -0.2
SLC25A39-201ENST00000225308 TRBV30A0A0K0K1B3 111 aa13.82□□□□□ -0.2
SLC25A39-201ENST00000225308 CKS1BP61024 79 aa13.82□□□□□ -0.2
SLC25A39-201ENST00000225308 COX7B2Q8TF08 81 aa13.82□□□□□ -0.2
SLC25A39-201ENST00000225308 MAJINQ3KP22 176 aa13.81□□□□□ -0.2
SLC25A39-201ENST00000225308 A0A087WYN8 130 aa13.8□□□□□ -0.2
SLC25A39-201ENST00000225308 PTTG1IPP53801 180 aa13.8□□□□□ -0.2
SLC25A39-201ENST00000225308 HSBP1L1C9JCN9 74 aa13.79□□□□□ -0.2
SLC25A39-201ENST00000225308 CXCL5P42830 114 aa13.79□□□□□ -0.2
SLC25A39-201ENST00000225308 C9orf116Q5BN46 136 aaPredicted RBP13.79□□□□□ -0.2
SLC25A39-201ENST00000225308 LINC00518Q8N0U6 118 aa13.79□□□□□ -0.2
SLC25A39-201ENST00000225308 KRTAP4-5Q9BYR2 181 aa13.79□□□□□ -0.2
SLC25A39-201ENST00000225308 TLX1NBP0CAT3 122 aa13.79□□□□□ -0.2
SLC25A39-201ENST00000225308 RPL18AQ02543 176 aaKnown RBP13.79□□□□□ -0.2
SLC25A39-201ENST00000225308 GAGE2BQ13066 116 aa13.79□□□□□ -0.2
SLC25A39-201ENST00000225308 LINC00474Q9P2X8 69 aa13.79□□□□□ -0.2
SLC25A39-201ENST00000225308 E9PLD3 99 aa13.78□□□□□ -0.2
SLC25A39-201ENST00000225308 DPH3Q96FX2 82 aa13.78□□□□□ -0.2
SLC25A39-201ENST00000225308 ANKRD39Q53RE8 183 aa13.77□□□□□ -0.21
SLC25A39-201ENST00000225308 Q6ZRP5 223 aa13.77□□□□□ -0.21
SLC25A39-201ENST00000225308 PLAC8Q9NZF1 115 aa13.77□□□□□ -0.21
SLC25A39-201ENST00000225308 LEPROTO15243 131 aa13.76□□□□□ -0.21
SLC25A39-201ENST00000225308 SMIM6P0DI80 62 aa13.75□□□□□ -0.21
SLC25A39-201ENST00000225308 VAMP8Q9BV40 100 aa13.75□□□□□ -0.21
SLC25A39-201ENST00000225308 NDUFC2-KCTD14E9PQ53 114 aa13.75□□□□□ -0.21
SLC25A39-201ENST00000225308 Q5VSD8 79 aa13.75□□□□□ -0.21
SLC25A39-201ENST00000225308 LINC00528Q8N1L1 170 aa13.75□□□□□ -0.21
SLC25A39-201ENST00000225308 PLEKHB2Q96CS7 222 aa13.75□□□□□ -0.21
SLC25A39-201ENST00000225308 VPS13BQ7Z7G8 4022 aa13.74□□□□□ -0.21
SLC25A39-201ENST00000225308 IGKV2D-26A0A0A0MRZ7 120 aa13.74□□□□□ -0.21
SLC25A39-201ENST00000225308 J3QQQ9 107 aa13.73□□□□□ -0.21
SLC25A39-201ENST00000225308 PAM16Q9Y3D7 125 aa13.73□□□□□ -0.21
SLC25A39-201ENST00000225308 EPM2AB3EWF7 344 aa13.72□□□□□ -0.21
SLC25A39-201ENST00000225308 TSPEAR-AS2P59090 65 aa13.72□□□□□ -0.21
SLC25A39-201ENST00000225308 NMUP48645 174 aa13.72□□□□□ -0.21
SLC25A39-201ENST00000225308 LGALS3P17931 250 aaKnown RBP13.71□□□□□ -0.22
SLC25A39-201ENST00000225308 GAGE2EQ4V326 116 aa13.71□□□□□ -0.22
SLC25A39-201ENST00000225308 SPATA45Q537H7 98 aa13.71□□□□□ -0.22
SLC25A39-201ENST00000225308 GAGE2DQ9UEU5 116 aa13.71□□□□□ -0.22
SLC25A39-201ENST00000225308 FAM229AH3BQW9 127 aa13.7□□□□□ -0.22
SLC25A39-201ENST00000225308 S100A12P80511 92 aa13.7□□□□□ -0.22
SLC25A39-201ENST00000225308 A0A1W2PNN7 141 aa13.68□□□□□ -0.22
SLC25A39-201ENST00000225308 CTAG1AP78358 180 aa13.68□□□□□ -0.22
SLC25A39-201ENST00000225308 ABCA13Q86UQ4 5058 aa13.68□□□□□ -0.22
SLC25A39-201ENST00000225308 ZNF625Q96I27 306 aaPredicted RBP13.68□□□□□ -0.22
SLC25A39-201ENST00000225308 NDUFA12Q9UI09 145 aa13.68□□□□□ -0.22
SLC25A39-201ENST00000225308 C9orf129Q5T035 196 aaKnown RBP13.66□□□□□ -0.22
SLC25A39-201ENST00000225308 TTTY13Q9BZ97 58 aa13.66□□□□□ -0.22
SLC25A39-201ENST00000225308 SFTA2Q6UW10 78 aa13.65□□□□□ -0.22
SLC25A39-201ENST00000225308 PCP2Q8IVA1 136 aa13.65□□□□□ -0.22
SLC25A39-201ENST00000225308 MYMXA0A1B0GTQ4 84 aa13.64□□□□□ -0.23
SLC25A39-201ENST00000225308 FAM168BA1KXE4 195 aa13.64□□□□□ -0.23
SLC25A39-201ENST00000225308 C12orf57Q99622 126 aa13.64□□□□□ -0.23
SLC25A39-201ENST00000225308 FLG2Q5D862 2391 aaPredicted RBP13.64□□□□□ -0.23
SLC25A39-201ENST00000225308 PCLOQ9Y6V0 5065 aa13.64□□□□□ -0.23
SLC25A39-201ENST00000225308 ZNF815PA8K554 130 aa13.64□□□□□ -0.23
SLC25A39-201ENST00000225308 KRTAP10-4P60372 401 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms