RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 PANO1I0J062 215 aa12.68□□□□□ -0.38
HOXA6-201ENST00000222728 XGP55808 180 aa12.68□□□□□ -0.38
HOXA6-201ENST00000222728 CKS1BP61024 79 aa12.68□□□□□ -0.38
HOXA6-201ENST00000222728 HIST3H2BBQ8N257 126 aa12.68□□□□□ -0.38
HOXA6-201ENST00000222728 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.68□□□□□ -0.38
HOXA6-201ENST00000222728 HSPG2P98160 4391 aa12.68□□□□□ -0.38
HOXA6-201ENST00000222728 RYR1P21817 5038 aa12.67□□□□□ -0.38
HOXA6-201ENST00000222728 IGLV5-39A0A0G2JS06 123 aa12.67□□□□□ -0.38
HOXA6-201ENST00000222728 CDK2AP2O75956 126 aa12.67□□□□□ -0.38
HOXA6-201ENST00000222728 C3orf79P0CE67 100 aa12.67□□□□□ -0.38
HOXA6-201ENST00000222728 KRTDAPP60985 99 aa12.67□□□□□ -0.38
HOXA6-201ENST00000222728 IGKV2-24A0A0C4DH68 120 aa12.66□□□□□ -0.38
HOXA6-201ENST00000222728 TMEM223A0PJW6 202 aa12.66□□□□□ -0.38
HOXA6-201ENST00000222728 DPM2O94777 84 aa12.66□□□□□ -0.38
HOXA6-201ENST00000222728 A0A096LNI7 61 aa12.65□□□□□ -0.38
HOXA6-201ENST00000222728 PLNP26678 52 aa12.65□□□□□ -0.38
HOXA6-201ENST00000222728 SNRPEP62304 92 aaKnown RBP12.65□□□□□ -0.38
HOXA6-201ENST00000222728 RNF151Q2KHN1 245 aa12.65□□□□□ -0.38
HOXA6-201ENST00000222728 C9orf116Q5BN46 136 aaPredicted RBP12.65□□□□□ -0.38
HOXA6-201ENST00000222728 LOC107984640A0A0U1RRK4 108 aa12.64□□□□□ -0.39
HOXA6-201ENST00000222728 IGKCP01834 107 aa12.64□□□□□ -0.39
HOXA6-201ENST00000222728 S100A2P29034 98 aa12.64□□□□□ -0.39
HOXA6-201ENST00000222728 TRBV30A0A0K0K1B3 111 aa12.63□□□□□ -0.39
HOXA6-201ENST00000222728 RPL18AQ02543 176 aaKnown RBP12.63□□□□□ -0.39
HOXA6-201ENST00000222728 GAGE2BQ13066 116 aa12.63□□□□□ -0.39
HOXA6-201ENST00000222728 PET117Q6UWS5 81 aa12.63□□□□□ -0.39
HOXA6-201ENST00000222728 SCXQ7RTU7 201 aa12.63□□□□□ -0.39
HOXA6-201ENST00000222728 HIST1H2BLQ99880 126 aa12.63□□□□□ -0.39
HOXA6-201ENST00000222728 CXCL5P42830 114 aa12.62□□□□□ -0.39
HOXA6-201ENST00000222728 LINC01545Q5VT33 79 aa12.62□□□□□ -0.39
HOXA6-201ENST00000222728 MAJINQ3KP22 176 aa12.61□□□□□ -0.39
HOXA6-201ENST00000222728 DPH3Q96FX2 82 aa12.61□□□□□ -0.39
HOXA6-201ENST00000222728 CIRBP-AS1Q8TBR5 109 aa12.6□□□□□ -0.39
HOXA6-201ENST00000222728 SPACA4Q8TDM5 124 aa12.6□□□□□ -0.39
HOXA6-201ENST00000222728 PKIGQ9Y2B9 76 aa12.6□□□□□ -0.39
HOXA6-201ENST00000222728 C5orf52A6NGY3 159 aa12.59□□□□□ -0.39
HOXA6-201ENST00000222728 PTTG1IPP53801 180 aa12.59□□□□□ -0.39
HOXA6-201ENST00000222728 CIRBPQ14011 172 aaKnown RBP12.59□□□□□ -0.39
HOXA6-201ENST00000222728 Q6ZRP5 223 aa12.58□□□□□ -0.4
HOXA6-201ENST00000222728 SMR3BP02814 79 aaPredicted RBP12.57□□□□□ -0.4
HOXA6-201ENST00000222728 TLX1NBP0CAT3 122 aa12.57□□□□□ -0.4
HOXA6-201ENST00000222728 GAGE2EQ4V326 116 aa12.57□□□□□ -0.4
HOXA6-201ENST00000222728 KRTAP17-1Q9BYP8 105 aa12.57□□□□□ -0.4
HOXA6-201ENST00000222728 GAGE2DQ9UEU5 116 aa12.57□□□□□ -0.4
HOXA6-201ENST00000222728 A0A087WYN8 130 aa12.56□□□□□ -0.4
HOXA6-201ENST00000222728 ZNF625Q96I27 306 aaPredicted RBP12.56□□□□□ -0.4
HOXA6-201ENST00000222728 TMA7Q9Y2S6 64 aaKnown RBP12.56□□□□□ -0.4
HOXA6-201ENST00000222728 NDUFC2-KCTD14E9PQ53 114 aa12.55□□□□□ -0.4
HOXA6-201ENST00000222728 TSPEAR-AS2P59090 65 aa12.55□□□□□ -0.4
HOXA6-201ENST00000222728 HERVK_113P61574 105 aa12.55□□□□□ -0.4
HOXA6-201ENST00000222728 STPG4Q8N801 248 aa12.55□□□□□ -0.4
HOXA6-201ENST00000222728 C20orf202A1L168 122 aa12.54□□□□□ -0.4
HOXA6-201ENST00000222728 LEPROTO15243 131 aa12.54□□□□□ -0.4
HOXA6-201ENST00000222728 HERC2O95714 4834 aa12.53□□□□□ -0.4
HOXA6-201ENST00000222728 ATOH7Q8N100 152 aa12.53□□□□□ -0.4
HOXA6-201ENST00000222728 LINC00474Q9P2X8 69 aa12.53□□□□□ -0.4
HOXA6-201ENST00000222728 PLEKHB2Q96CS7 222 aa12.52□□□□□ -0.41
HOXA6-201ENST00000222728 PFN2P35080 140 aa12.51□□□□□ -0.41
HOXA6-201ENST00000222728 PLAC8Q9NZF1 115 aa12.51□□□□□ -0.41
HOXA6-201ENST00000222728 A0A1W2PNN7 141 aa12.5□□□□□ -0.41
HOXA6-201ENST00000222728 J3QQQ9 107 aa12.5□□□□□ -0.41
HOXA6-201ENST00000222728 NDUFA12Q9UI09 145 aa12.5□□□□□ -0.41
HOXA6-201ENST00000222728 ERG28Q9UKR5 140 aa12.5□□□□□ -0.41
HOXA6-201ENST00000222728 FAT1Q14517 4588 aa12.5□□□□□ -0.41
HOXA6-201ENST00000222728 FAM168BA1KXE4 195 aa12.49□□□□□ -0.41
HOXA6-201ENST00000222728 E9PLD3 99 aa12.49□□□□□ -0.41
HOXA6-201ENST00000222728 C9orf129Q5T035 196 aaKnown RBP12.49□□□□□ -0.41
HOXA6-201ENST00000222728 XAGE1AQ9HD64 81 aa12.49□□□□□ -0.41
HOXA6-201ENST00000222728 LGALS3P17931 250 aaKnown RBP12.48□□□□□ -0.41
HOXA6-201ENST00000222728 SFTA2Q6UW10 78 aa12.48□□□□□ -0.41
HOXA6-201ENST00000222728 LINC00528Q8N1L1 170 aa12.47□□□□□ -0.41
HOXA6-201ENST00000222728 Q8N1X5 172 aa12.47□□□□□ -0.41
HOXA6-201ENST00000222728 A0A0U1RRA0 63 aa12.46□□□□□ -0.41
HOXA6-201ENST00000222728 MYMXA0A1B0GTQ4 84 aa12.46□□□□□ -0.41
HOXA6-201ENST00000222728 IGKV2D-26A0A0A0MRZ7 120 aa12.45□□□□□ -0.42
HOXA6-201ENST00000222728 FAM19A5Q7Z5A7 132 aaPredicted RBP12.45□□□□□ -0.42
HOXA6-201ENST00000222728 LINC00158P58513 81 aa12.44□□□□□ -0.42
HOXA6-201ENST00000222728 HERV-K104P63124 156 aa12.44□□□□□ -0.42
HOXA6-201ENST00000222728 ANKRD39Q53RE8 183 aa12.44□□□□□ -0.42
HOXA6-201ENST00000222728 MEIG1Q5JSS6 88 aa12.44□□□□□ -0.42
HOXA6-201ENST00000222728 SCGB1D1O95968 90 aa12.43□□□□□ -0.42
HOXA6-201ENST00000222728 SMIM13P0DJ93 91 aa12.43□□□□□ -0.42
HOXA6-201ENST00000222728 KRTAP7-1Q8IUC3 87 aa12.43□□□□□ -0.42
HOXA6-201ENST00000222728 NMUP48645 174 aa12.42□□□□□ -0.42
HOXA6-201ENST00000222728 COX17Q14061 63 aa12.42□□□□□ -0.42
HOXA6-201ENST00000222728 Q5VSD8 79 aa12.42□□□□□ -0.42
HOXA6-201ENST00000222728 KRTAP4-5Q9BYR2 181 aa12.42□□□□□ -0.42
HOXA6-201ENST00000222728 TTTY13Q9BZ97 58 aa12.42□□□□□ -0.42
HOXA6-201ENST00000222728 VPS13BQ7Z7G8 4022 aa12.42□□□□□ -0.42
HOXA6-201ENST00000222728 EPM2AB3EWF7 344 aa12.41□□□□□ -0.42
HOXA6-201ENST00000222728 AKR1D1P51857 326 aa12.41□□□□□ -0.42
HOXA6-201ENST00000222728 SERTAD4-AS1Q5TG53 156 aa12.41□□□□□ -0.42
HOXA6-201ENST00000222728 SND1-IT1Q9HBX3 110 aa12.41□□□□□ -0.42
HOXA6-201ENST00000222728 FAM229AH3BQW9 127 aa12.4□□□□□ -0.42
HOXA6-201ENST00000222728 PHF5AQ7RTV0 110 aaKnown RBP12.4□□□□□ -0.42
HOXA6-201ENST00000222728 ZNF815PA8K554 130 aa12.37□□□□□ -0.43
HOXA6-201ENST00000222728 M0QXV9 152 aa12.37□□□□□ -0.43
HOXA6-201ENST00000222728 MIR7-3HGQ8N6C7 128 aa12.37□□□□□ -0.43
HOXA6-201ENST00000222728 C7orf33Q8WU49 177 aa12.37□□□□□ -0.43
HOXA6-201ENST00000222728 A0A0J9YXY3 114 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms