RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 IGLV5-39A0A0G2JS06 123 aa17.17■□□□□ 0.34
STUB1-201ENST00000219548 TMEM223A0PJW6 202 aa17.17■□□□□ 0.34
STUB1-201ENST00000219548 NDUFA1O15239 70 aa17.17■□□□□ 0.34
STUB1-201ENST00000219548 UNQ6190/PRO20217Q6UXQ8 127 aa17.17■□□□□ 0.34
STUB1-201ENST00000219548 TMA7Q9Y2S6 64 aaKnown RBP17.17■□□□□ 0.34
STUB1-201ENST00000219548 IGKCP01834 107 aa17.16■□□□□ 0.34
STUB1-201ENST00000219548 LINC01545Q5VT33 79 aa17.16■□□□□ 0.34
STUB1-201ENST00000219548 CKS1BP61024 79 aa17.14■□□□□ 0.33
STUB1-201ENST00000219548 F8WDY8 70 aa17.13■□□□□ 0.33
STUB1-201ENST00000219548 SDIM1Q6ZPB5 146 aa17.13■□□□□ 0.33
STUB1-201ENST00000219548 C6orf48Q9UBA6 75 aa17.12■□□□□ 0.33
STUB1-201ENST00000219548 FAM30AQ9NZY2 134 aa17.12■□□□□ 0.33
STUB1-201ENST00000219548 KIAA1109Q2LD37 5005 aa17.08■□□□□ 0.33
STUB1-201ENST00000219548 CXCL5P42830 114 aa17.08■□□□□ 0.32
STUB1-201ENST00000219548 C20orf202A1L168 122 aa17.06■□□□□ 0.32
STUB1-201ENST00000219548 CHTF8P0CG12 524 aa17.06■□□□□ 0.32
STUB1-201ENST00000219548 RNF151Q2KHN1 245 aa17.06■□□□□ 0.32
STUB1-201ENST00000219548 C9orf116Q5BN46 136 aaPredicted RBP17.06■□□□□ 0.32
STUB1-201ENST00000219548 TRBV30A0A0K0K1B3 111 aa17.05■□□□□ 0.32
STUB1-201ENST00000219548 PANO1I0J062 215 aa17.05■□□□□ 0.32
STUB1-201ENST00000219548 HAMPP81172 84 aa17.05■□□□□ 0.32
STUB1-201ENST00000219548 Q6ZSA8 131 aa17.05■□□□□ 0.32
STUB1-201ENST00000219548 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.05■□□□□ 0.32
STUB1-201ENST00000219548 A0A096LNI7 61 aa17.04■□□□□ 0.32
STUB1-201ENST00000219548 LOC107984640A0A0U1RRK4 108 aa17.04■□□□□ 0.32
STUB1-201ENST00000219548 RYR1P21817 5038 aa17.04■□□□□ 0.32
STUB1-201ENST00000219548 HSPG2P98160 4391 aa17.04■□□□□ 0.32
STUB1-201ENST00000219548 IGKV2-24A0A0C4DH68 120 aa17.03■□□□□ 0.32
STUB1-201ENST00000219548 HERVK_113P61574 105 aa17.03■□□□□ 0.32
STUB1-201ENST00000219548 RPL18AQ02543 176 aaKnown RBP17.02■□□□□ 0.32
STUB1-201ENST00000219548 TSPEAR-AS2P59090 65 aa17.01■□□□□ 0.31
STUB1-201ENST00000219548 ATOH7Q8N100 152 aa17.01■□□□□ 0.31
STUB1-201ENST00000219548 GAGE2BQ13066 116 aa17■□□□□ 0.31
STUB1-201ENST00000219548 STPG4Q8N801 248 aa17■□□□□ 0.31
STUB1-201ENST00000219548 LEPROTO15243 131 aa16.99■□□□□ 0.31
STUB1-201ENST00000219548 XGP55808 180 aa16.99■□□□□ 0.31
STUB1-201ENST00000219548 PKIGQ9Y2B9 76 aa16.99■□□□□ 0.31
STUB1-201ENST00000219548 ZNF625Q96I27 306 aaPredicted RBP16.99■□□□□ 0.31
STUB1-201ENST00000219548 CDK2AP2O75956 126 aa16.98■□□□□ 0.31
STUB1-201ENST00000219548 TLX1NBP0CAT3 122 aa16.98■□□□□ 0.31
STUB1-201ENST00000219548 PTTG1IPP53801 180 aa16.98■□□□□ 0.31
STUB1-201ENST00000219548 Q6ZRP5 223 aa16.98■□□□□ 0.31
STUB1-201ENST00000219548 PLEKHB2Q96CS7 222 aa16.98■□□□□ 0.31
STUB1-201ENST00000219548 SPACA4Q8TDM5 124 aa16.97■□□□□ 0.31
STUB1-201ENST00000219548 E9PLD3 99 aa16.96■□□□□ 0.31
STUB1-201ENST00000219548 CIRBPQ14011 172 aaKnown RBP16.96■□□□□ 0.31
STUB1-201ENST00000219548 MAJINQ3KP22 176 aa16.96■□□□□ 0.31
STUB1-201ENST00000219548 SCXQ7RTU7 201 aa16.96■□□□□ 0.31
STUB1-201ENST00000219548 NDUFC2-KCTD14E9PQ53 114 aa16.95■□□□□ 0.3
STUB1-201ENST00000219548 J3QQQ9 107 aa16.95■□□□□ 0.3
STUB1-201ENST00000219548 GAGE2EQ4V326 116 aa16.94■□□□□ 0.3
STUB1-201ENST00000219548 DPH3Q96FX2 82 aa16.94■□□□□ 0.3
STUB1-201ENST00000219548 GAGE2DQ9UEU5 116 aa16.94■□□□□ 0.3
STUB1-201ENST00000219548 NDUFA12Q9UI09 145 aa16.94■□□□□ 0.3
STUB1-201ENST00000219548 CIRBP-AS1Q8TBR5 109 aa16.93■□□□□ 0.3
STUB1-201ENST00000219548 LGALS3P17931 250 aaKnown RBP16.93■□□□□ 0.3
STUB1-201ENST00000219548 SFTA2Q6UW10 78 aa16.93■□□□□ 0.3
STUB1-201ENST00000219548 SCGB1D1O95968 90 aa16.92■□□□□ 0.3
STUB1-201ENST00000219548 AKR1D1P51857 326 aa16.91■□□□□ 0.3
STUB1-201ENST00000219548 LINC00474Q9P2X8 69 aa16.91■□□□□ 0.3
STUB1-201ENST00000219548 ERG28Q9UKR5 140 aa16.91■□□□□ 0.3
STUB1-201ENST00000219548 A0A087WYN8 130 aa16.9■□□□□ 0.3
STUB1-201ENST00000219548 IGKV2D-26A0A0A0MRZ7 120 aa16.9■□□□□ 0.3
STUB1-201ENST00000219548 PFN2P35080 140 aa16.9■□□□□ 0.3
STUB1-201ENST00000219548 ANKRD39Q53RE8 183 aa16.89■□□□□ 0.29
STUB1-201ENST00000219548 MYMXA0A1B0GTQ4 84 aa16.88■□□□□ 0.29
STUB1-201ENST00000219548 XAGE1AQ9HD64 81 aa16.86■□□□□ 0.29
STUB1-201ENST00000219548 FAT1Q14517 4588 aa16.86■□□□□ 0.29
STUB1-201ENST00000219548 HERV-K104P63124 156 aa16.86■□□□□ 0.29
STUB1-201ENST00000219548 A0A0U1RRA0 63 aa16.85■□□□□ 0.29
STUB1-201ENST00000219548 NMUP48645 174 aa16.85■□□□□ 0.29
STUB1-201ENST00000219548 C9orf129Q5T035 196 aaKnown RBP16.85■□□□□ 0.29
STUB1-201ENST00000219548 TTTY13Q9BZ97 58 aa16.85■□□□□ 0.29
STUB1-201ENST00000219548 MEIG1Q5JSS6 88 aa16.84■□□□□ 0.29
STUB1-201ENST00000219548 PLAC8Q9NZF1 115 aa16.84■□□□□ 0.29
STUB1-201ENST00000219548 A0A1W2PNN7 141 aa16.83■□□□□ 0.28
STUB1-201ENST00000219548 SMR3BP02814 79 aaPredicted RBP16.83■□□□□ 0.28
STUB1-201ENST00000219548 COX17Q14061 63 aa16.83■□□□□ 0.28
STUB1-201ENST00000219548 HERC2O95714 4834 aa16.83■□□□□ 0.28
STUB1-201ENST00000219548 FAM168BA1KXE4 195 aa16.82■□□□□ 0.28
STUB1-201ENST00000219548 SMIM13P0DJ93 91 aa16.82■□□□□ 0.28
STUB1-201ENST00000219548 LINC00158P58513 81 aa16.81■□□□□ 0.28
STUB1-201ENST00000219548 HSBP1L1C9JCN9 74 aa16.79■□□□□ 0.28
STUB1-201ENST00000219548 JOSD1Q15040 202 aaPredicted RBP16.79■□□□□ 0.28
STUB1-201ENST00000219548 ZNF815PA8K554 130 aa16.78■□□□□ 0.28
STUB1-201ENST00000219548 KRTAP17-1Q9BYP8 105 aa16.78■□□□□ 0.28
STUB1-201ENST00000219548 FAM19A5Q7Z5A7 132 aaPredicted RBP16.77■□□□□ 0.28
STUB1-201ENST00000219548 SND1-IT1Q9HBX3 110 aa16.77■□□□□ 0.28
STUB1-201ENST00000219548 A0A0J9YXY3 114 aa16.76■□□□□ 0.27
STUB1-201ENST00000219548 KRTAP7-1Q8IUC3 87 aa16.76■□□□□ 0.27
STUB1-201ENST00000219548 PCP2Q8IVA1 136 aa16.75■□□□□ 0.27
STUB1-201ENST00000219548 LINC00587B1AMM8 73 aa16.74■□□□□ 0.27
STUB1-201ENST00000219548 SERTAD4-AS1Q5TG53 156 aa16.74■□□□□ 0.27
STUB1-201ENST00000219548 MIR7-3HGQ8N6C7 128 aa16.74■□□□□ 0.27
STUB1-201ENST00000219548 EPM2AB3EWF7 344 aa16.73■□□□□ 0.27
STUB1-201ENST00000219548 DAND5Q8N907 189 aa16.73■□□□□ 0.27
STUB1-201ENST00000219548 VPS13BQ7Z7G8 4022 aa16.72■□□□□ 0.27
STUB1-201ENST00000219548 PYY3Q5JQD4 70 aa16.72■□□□□ 0.27
STUB1-201ENST00000219548 LINC00528Q8N1L1 170 aa16.72■□□□□ 0.27
STUB1-201ENST00000219548 PHF5AQ7RTV0 110 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms