RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 HECTD4Q9Y4D8 3996 aa17.67■□□□□ 0.42
CHMP4B-201ENST00000217402 LEPROTO15243 131 aa17.65■□□□□ 0.42
CHMP4B-201ENST00000217402 TSPEAR-AS2P59090 65 aa17.65■□□□□ 0.42
CHMP4B-201ENST00000217402 JOSD1Q15040 202 aaPredicted RBP17.65■□□□□ 0.42
CHMP4B-201ENST00000217402 CDPF1Q6NVV7 123 aa17.65■□□□□ 0.42
CHMP4B-201ENST00000217402 E9PLD3 99 aa17.65■□□□□ 0.42
CHMP4B-201ENST00000217402 F8WDY8 70 aa17.65■□□□□ 0.42
CHMP4B-201ENST00000217402 CXCL5P42830 114 aa17.65■□□□□ 0.42
CHMP4B-201ENST00000217402 MAJINQ3KP22 176 aa17.65■□□□□ 0.42
CHMP4B-201ENST00000217402 PLEKHB2Q96CS7 222 aa17.64■□□□□ 0.41
CHMP4B-201ENST00000217402 C6orf48Q9UBA6 75 aa17.63■□□□□ 0.41
CHMP4B-201ENST00000217402 J3QQQ9 107 aa17.62■□□□□ 0.41
CHMP4B-201ENST00000217402 C9orf163Q8N9P6 203 aa17.62■□□□□ 0.41
CHMP4B-201ENST00000217402 ANKRD39Q53RE8 183 aa17.61■□□□□ 0.41
CHMP4B-201ENST00000217402 IGKV2D-26A0A0A0MRZ7 120 aa17.6■□□□□ 0.41
CHMP4B-201ENST00000217402 LGALS3P17931 250 aaKnown RBP17.6■□□□□ 0.41
CHMP4B-201ENST00000217402 PYY3Q5JQD4 70 aa17.6■□□□□ 0.41
CHMP4B-201ENST00000217402 C16orf90A8MZG2 172 aa17.58■□□□□ 0.41
CHMP4B-201ENST00000217402 HSBP1L1C9JCN9 74 aa17.58■□□□□ 0.41
CHMP4B-201ENST00000217402 GCSHP23434 173 aa17.58■□□□□ 0.41
CHMP4B-201ENST00000217402 C9orf116Q5BN46 136 aaPredicted RBP17.58■□□□□ 0.41
CHMP4B-201ENST00000217402 ZNF625Q96I27 306 aaPredicted RBP17.58■□□□□ 0.41
CHMP4B-201ENST00000217402 NDUFA12Q9UI09 145 aa17.58■□□□□ 0.41
CHMP4B-201ENST00000217402 TRBV30A0A0K0K1B3 111 aa17.58■□□□□ 0.4
CHMP4B-201ENST00000217402 PKHD1P08F94 4074 aa17.57■□□□□ 0.4
CHMP4B-201ENST00000217402 NMUP48645 174 aa17.57■□□□□ 0.4
CHMP4B-201ENST00000217402 DNAH5Q8TE73 4624 aa17.56■□□□□ 0.4
CHMP4B-201ENST00000217402 RNF151Q2KHN1 245 aa17.54■□□□□ 0.4
CHMP4B-201ENST00000217402 SFTA2Q6UW10 78 aa17.54■□□□□ 0.4
CHMP4B-201ENST00000217402 TTTY13Q9BZ97 58 aa17.54■□□□□ 0.4
CHMP4B-201ENST00000217402 MYMXA0A1B0GTQ4 84 aa17.53■□□□□ 0.4
CHMP4B-201ENST00000217402 LOC105371267A0A1B0GV96 52 aa17.52■□□□□ 0.4
CHMP4B-201ENST00000217402 KRTAP10-1P60331 282 aa17.52■□□□□ 0.4
CHMP4B-201ENST00000217402 SDIM1Q6ZPB5 146 aa17.51■□□□□ 0.39
CHMP4B-201ENST00000217402 RPL18AQ02543 176 aaKnown RBP17.5■□□□□ 0.39
CHMP4B-201ENST00000217402 LOC107984640A0A0U1RRK4 108 aa17.5■□□□□ 0.39
CHMP4B-201ENST00000217402 VAMP8Q9BV40 100 aa17.5■□□□□ 0.39
CHMP4B-201ENST00000217402 ERG28Q9UKR5 140 aa17.49■□□□□ 0.39
CHMP4B-201ENST00000217402 PAM16Q9Y3D7 125 aa17.49■□□□□ 0.39
CHMP4B-201ENST00000217402 ZNF815PA8K554 130 aa17.48■□□□□ 0.39
CHMP4B-201ENST00000217402 PFN2P35080 140 aa17.48■□□□□ 0.39
CHMP4B-201ENST00000217402 HERV-K104P63124 156 aa17.48■□□□□ 0.39
CHMP4B-201ENST00000217402 PCP2Q8IVA1 136 aa17.47■□□□□ 0.39
CHMP4B-201ENST00000217402 IGKV2-24A0A0C4DH68 120 aa17.47■□□□□ 0.39
CHMP4B-201ENST00000217402 GAGE2BQ13066 116 aa17.47■□□□□ 0.39
CHMP4B-201ENST00000217402 MEIG1Q5JSS6 88 aa17.47■□□□□ 0.39
CHMP4B-201ENST00000217402 A0A096LNI7 61 aa17.46■□□□□ 0.39
CHMP4B-201ENST00000217402 NDUFC2-KCTD14E9PQ53 114 aa17.46■□□□□ 0.39
CHMP4B-201ENST00000217402 CHTF8P0CG12 524 aa17.46■□□□□ 0.39
CHMP4B-201ENST00000217402 Q6ZRP5 223 aa17.46■□□□□ 0.39
CHMP4B-201ENST00000217402 PKIGQ9Y2B9 76 aa17.46■□□□□ 0.39
CHMP4B-201ENST00000217402 EPPK1P58107 5090 aaKnown RBP17.46■□□□□ 0.39
CHMP4B-201ENST00000217402 A0A0U1RRA0 63 aa17.45■□□□□ 0.38
CHMP4B-201ENST00000217402 TLX1NBP0CAT3 122 aa17.45■□□□□ 0.38
CHMP4B-201ENST00000217402 SPATA45Q537H7 98 aa17.45■□□□□ 0.38
CHMP4B-201ENST00000217402 GAGE2EQ4V326 116 aa17.44■□□□□ 0.38
CHMP4B-201ENST00000217402 GAGE2DQ9UEU5 116 aa17.44■□□□□ 0.38
CHMP4B-201ENST00000217402 A0A0J9YXY3 114 aa17.42■□□□□ 0.38
CHMP4B-201ENST00000217402 SMIM13P0DJ93 91 aa17.42■□□□□ 0.38
CHMP4B-201ENST00000217402 PTTG1IPP53801 180 aa17.42■□□□□ 0.38
CHMP4B-201ENST00000217402 LINC00158P58513 81 aa17.42■□□□□ 0.38
CHMP4B-201ENST00000217402 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.42■□□□□ 0.38
CHMP4B-201ENST00000217402 PANO1I0J062 215 aa17.41■□□□□ 0.38
CHMP4B-201ENST00000217402 FAM30AQ9NZY2 134 aa17.41■□□□□ 0.38
CHMP4B-201ENST00000217402 COX17Q14061 63 aa17.4■□□□□ 0.38
CHMP4B-201ENST00000217402 DYNC1H1Q14204 4646 aaKnown RBP17.39■□□□□ 0.38
CHMP4B-201ENST00000217402 XAGE1AQ9HD64 81 aa17.38■□□□□ 0.37
CHMP4B-201ENST00000217402 TP73-AS1Q9UF72 201 aa17.38■□□□□ 0.37
CHMP4B-201ENST00000217402 SCGB1D4Q6XE38 83 aa17.37■□□□□ 0.37
CHMP4B-201ENST00000217402 LRP1BQ9NZR2 4599 aa17.37■□□□□ 0.37
CHMP4B-201ENST00000217402 LINC00587B1AMM8 73 aa17.36■□□□□ 0.37
CHMP4B-201ENST00000217402 SMIM6P0DI80 62 aa17.36■□□□□ 0.37
CHMP4B-201ENST00000217402 SPACA4Q8TDM5 124 aa17.36■□□□□ 0.37
CHMP4B-201ENST00000217402 DPH3Q96FX2 82 aa17.36■□□□□ 0.37
CHMP4B-201ENST00000217402 C14orf144Q96I85 54 aa17.36■□□□□ 0.37
CHMP4B-201ENST00000217402 Q6ZSA8 131 aa17.35■□□□□ 0.37
CHMP4B-201ENST00000217402 DAND5Q8N907 189 aa17.35■□□□□ 0.37
CHMP4B-201ENST00000217402 LINC00474Q9P2X8 69 aa17.35■□□□□ 0.37
CHMP4B-201ENST00000217402 COX8AP10176 69 aa17.34■□□□□ 0.37
CHMP4B-201ENST00000217402 S100A12P80511 92 aa17.34■□□□□ 0.37
CHMP4B-201ENST00000217402 HAMPP81172 84 aa17.34■□□□□ 0.37
CHMP4B-201ENST00000217402 MIR7-3HGQ8N6C7 128 aa17.34■□□□□ 0.37
CHMP4B-201ENST00000217402 CIRBPQ14011 172 aaKnown RBP17.33■□□□□ 0.37
CHMP4B-201ENST00000217402 C9orf129Q5T035 196 aaKnown RBP17.33■□□□□ 0.37
CHMP4B-201ENST00000217402 SND1-IT1Q9HBX3 110 aa17.32■□□□□ 0.36
CHMP4B-201ENST00000217402 BOD1L2Q8IYS8 172 aa17.31■□□□□ 0.36
CHMP4B-201ENST00000217402 ADAMTSL4-AS1Q5T5F5 129 aa17.3■□□□□ 0.36
CHMP4B-201ENST00000217402 LITAFQ99732 161 aa17.29■□□□□ 0.36
CHMP4B-201ENST00000217402 FAM168BA1KXE4 195 aa17.29■□□□□ 0.36
CHMP4B-201ENST00000217402 TIMM17BO60830 172 aa17.28■□□□□ 0.36
CHMP4B-201ENST00000217402 SCXQ7RTU7 201 aa17.28■□□□□ 0.36
CHMP4B-201ENST00000217402 A0A087WYN8 130 aa17.27■□□□□ 0.36
CHMP4B-201ENST00000217402 DNAH8Q96JB1 4490 aa17.26■□□□□ 0.35
CHMP4B-201ENST00000217402 NPC2P61916 151 aa17.25■□□□□ 0.35
CHMP4B-201ENST00000217402 SLC25A34Q6PIV7 304 aa17.25■□□□□ 0.35
CHMP4B-201ENST00000217402 CIRBP-AS1Q8TBR5 109 aa17.25■□□□□ 0.35
CHMP4B-201ENST00000217402 A0A1W2PNN7 141 aa17.25■□□□□ 0.35
CHMP4B-201ENST00000217402 TMEM238C9JI98 176 aa17.25■□□□□ 0.35
CHMP4B-201ENST00000217402 DLEU1O43261 78 aa17.25■□□□□ 0.35
CHMP4B-201ENST00000217402 FAM19A5Q7Z5A7 132 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms