RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 SCGB3A1Q96QR1 104 aa11.89□□□□□ -0.51
VPS72-207ENST00000640458 TIMM21Q9BVV7 248 aa11.89□□□□□ -0.51
VPS72-207ENST00000640458 SPANXA1Q9NS26 97 aa11.89□□□□□ -0.51
VPS72-207ENST00000640458 RPL39P62891 51 aaKnown RBP11.88□□□□□ -0.51
VPS72-207ENST00000640458 PMCHL1Q16048 86 aa11.88□□□□□ -0.51
VPS72-207ENST00000640458 MRPL52Q86TS9 123 aaKnown RBP11.88□□□□□ -0.51
VPS72-207ENST00000640458 FAM19A2Q8N3H0 131 aa11.88□□□□□ -0.51
VPS72-207ENST00000640458 OR5A1Q8NGJ0 315 aa11.88□□□□□ -0.51
VPS72-207ENST00000640458 LRP1Q07954 4544 aaKnown RBP11.87□□□□□ -0.51
VPS72-207ENST00000640458 IGLV10-54A0A075B6I4 117 aa11.87□□□□□ -0.51
VPS72-207ENST00000640458 ATP5LO75964 103 aa11.87□□□□□ -0.51
VPS72-207ENST00000640458 Q6ZN92 141 aa11.87□□□□□ -0.51
VPS72-207ENST00000640458 ERASQ7Z444 233 aa11.87□□□□□ -0.51
VPS72-207ENST00000640458 PYGO1Q9Y3Y4 419 aa11.87□□□□□ -0.51
VPS72-207ENST00000640458 CSDC2Q9Y534 153 aaKnown RBP11.87□□□□□ -0.51
VPS72-207ENST00000640458 USP17L23D6RBM5 183 aa11.86□□□□□ -0.51
VPS72-207ENST00000640458 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.86□□□□□ -0.51
VPS72-207ENST00000640458 LEPROTL1O95214 131 aa11.86□□□□□ -0.51
VPS72-207ENST00000640458 NPSP0C0P6 89 aa11.86□□□□□ -0.51
VPS72-207ENST00000640458 LINC00310P59036 64 aa11.86□□□□□ -0.51
VPS72-207ENST00000640458 TMEM141Q96I45 108 aa11.86□□□□□ -0.51
VPS72-207ENST00000640458 HSPB8Q9UJY1 196 aa11.86□□□□□ -0.51
VPS72-207ENST00000640458 UBE2D4Q9Y2X8 147 aa11.86□□□□□ -0.51
VPS72-207ENST00000640458 NUPR1O60356 82 aa11.85□□□□□ -0.51
VPS72-207ENST00000640458 OXTP01178 125 aa11.85□□□□□ -0.51
VPS72-207ENST00000640458 SNRPEP62304 92 aaKnown RBP11.85□□□□□ -0.51
VPS72-207ENST00000640458 TIMM17AQ99595 171 aa11.85□□□□□ -0.51
VPS72-207ENST00000640458 PDZD11Q5EBL8 140 aa11.84□□□□□ -0.51
VPS72-207ENST00000640458 PACRGQ96M98 296 aaPredicted RBP11.84□□□□□ -0.51
VPS72-207ENST00000640458 FABP4P15090 132 aa11.83□□□□□ -0.52
VPS72-207ENST00000640458 A0A096LNJ9 63 aa11.82□□□□□ -0.52
VPS72-207ENST00000640458 MRPS36P82909 103 aaKnown RBP11.82□□□□□ -0.52
VPS72-207ENST00000640458 ZNF664Q8N3J9 261 aa11.82□□□□□ -0.52
VPS72-207ENST00000640458 VCX2Q9H322 139 aa11.82□□□□□ -0.52
VPS72-207ENST00000640458 IGKV3OR2-268A0A0C4DH90 116 aa11.81□□□□□ -0.52
VPS72-207ENST00000640458 C5orf52A6NGY3 159 aa11.81□□□□□ -0.52
VPS72-207ENST00000640458 IGIPA6NJ69 53 aa11.81□□□□□ -0.52
VPS72-207ENST00000640458 PRSS1P07477 247 aa11.81□□□□□ -0.52
VPS72-207ENST00000640458 TEX43Q6ZNM6 134 aa11.81□□□□□ -0.52
VPS72-207ENST00000640458 IFI27L1Q96BM0 104 aa11.81□□□□□ -0.52
VPS72-207ENST00000640458 C2orf88Q9BSF0 95 aa11.81□□□□□ -0.52
VPS72-207ENST00000640458 CDC42SE2Q9NRR3 84 aa11.81□□□□□ -0.52
VPS72-207ENST00000640458 Q6ZSA8 131 aa11.8□□□□□ -0.52
VPS72-207ENST00000640458 HIST3H2BBQ8N257 126 aa11.8□□□□□ -0.52
VPS72-207ENST00000640458 MAP1LC3CQ9BXW4 147 aa11.8□□□□□ -0.52
VPS72-207ENST00000640458 IGLV4-3A0A075B6K6 122 aa11.79□□□□□ -0.52
VPS72-207ENST00000640458 GAGE12HA6NDE8 117 aa11.79□□□□□ -0.52
VPS72-207ENST00000640458 LINC01620Q4KN68 170 aa11.79□□□□□ -0.52
VPS72-207ENST00000640458 Q6ZUT4 128 aa11.78□□□□□ -0.52
VPS72-207ENST00000640458 CHCHD10Q8WYQ3 142 aaPredicted RBP11.78□□□□□ -0.52
VPS72-207ENST00000640458 LINC00959A0A1B0GUT2 108 aa11.76□□□□□ -0.53
VPS72-207ENST00000640458 IFITM10A6NMD0 228 aa11.76□□□□□ -0.53
VPS72-207ENST00000640458 CCL25O15444 150 aa11.76□□□□□ -0.53
VPS72-207ENST00000640458 KRTAP10-4P60372 401 aaPredicted RBP11.76□□□□□ -0.53
VPS72-207ENST00000640458 PMVKQ15126 192 aa11.76□□□□□ -0.53
VPS72-207ENST00000640458 SS18Q15532 418 aa11.76□□□□□ -0.53
VPS72-207ENST00000640458 OPRPNQ99935 248 aaPredicted RBP11.76□□□□□ -0.53
VPS72-207ENST00000640458 RNASE13Q5GAN3 156 aaKnown RBP11.75□□□□□ -0.53
VPS72-207ENST00000640458 CFAP161Q6P656 301 aa11.75□□□□□ -0.53
VPS72-207ENST00000640458 SCXQ7RTU7 201 aa11.75□□□□□ -0.53
VPS72-207ENST00000640458 HIST1H2BLQ99880 126 aa11.75□□□□□ -0.53
VPS72-207ENST00000640458 hDV102S1A0JD36 115 aa11.74□□□□□ -0.53
VPS72-207ENST00000640458 SEC11AP67812 179 aa11.74□□□□□ -0.53
VPS72-207ENST00000640458 FOXI1Q12951 378 aa11.74□□□□□ -0.53
VPS72-207ENST00000640458 C9orf163Q8N9P6 203 aa11.74□□□□□ -0.53
VPS72-207ENST00000640458 AMELXQ99217 191 aa11.74□□□□□ -0.53
VPS72-207ENST00000640458 FAT3Q8TDW7 4589 aa11.73□□□□□ -0.53
VPS72-207ENST00000640458 H0Y8G0 127 aa11.73□□□□□ -0.53
VPS72-207ENST00000640458 CNBPP62633 177 aaKnown RBP11.73□□□□□ -0.53
VPS72-207ENST00000640458 C15orf56Q8N910 161 aa11.73□□□□□ -0.53
VPS72-207ENST00000640458 TRAV13-1A0A0B4J241 112 aa11.72□□□□□ -0.53
VPS72-207ENST00000640458 TRAV12-1A0A0B4J245 112 aa11.72□□□□□ -0.53
VPS72-207ENST00000640458 XCL1P47992 114 aa11.72□□□□□ -0.53
VPS72-207ENST00000640458 KRTDAPP60985 99 aa11.72□□□□□ -0.53
VPS72-207ENST00000640458 LINC00173Q6ZV60 143 aa11.72□□□□□ -0.53
VPS72-207ENST00000640458 CST9LQ9H4G1 147 aa11.72□□□□□ -0.53
VPS72-207ENST00000640458 C20orf202A1L168 122 aa11.71□□□□□ -0.53
VPS72-207ENST00000640458 SYS1-DBNDD2H3BUS1 97 aa11.7□□□□□ -0.54
VPS72-207ENST00000640458 SLPIP03973 132 aa11.7□□□□□ -0.54
VPS72-207ENST00000640458 AKR1D1P51857 326 aa11.7□□□□□ -0.54
VPS72-207ENST00000640458 CD164L2Q6UWJ8 174 aa11.7□□□□□ -0.54
VPS72-207ENST00000640458 PET117Q6UWS5 81 aa11.7□□□□□ -0.54
VPS72-207ENST00000640458 CHAC1Q9BUX1 264 aa11.7□□□□□ -0.54
VPS72-207ENST00000640458 CHTOPQ9Y3Y2 248 aaKnown RBP11.7□□□□□ -0.54
VPS72-207ENST00000640458 C3orf79P0CE67 100 aa11.69□□□□□ -0.54
VPS72-207ENST00000640458 FAM104AQ969W3 186 aa11.69□□□□□ -0.54
VPS72-207ENST00000640458 GEMIN7Q9H840 131 aaKnown RBP11.69□□□□□ -0.54
VPS72-207ENST00000640458 GVQW2A0A096LPI5 108 aaPredicted RBP11.68□□□□□ -0.54
VPS72-207ENST00000640458 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.68□□□□□ -0.54
VPS72-207ENST00000640458 UBE2D1P51668 147 aa11.68□□□□□ -0.54
VPS72-207ENST00000640458 ZC2HC1BQ5TFG8 222 aa11.68□□□□□ -0.54
VPS72-207ENST00000640458 SDIM1Q6ZPB5 146 aa11.68□□□□□ -0.54
VPS72-207ENST00000640458 F8VRH5 84 aa11.67□□□□□ -0.54
VPS72-207ENST00000640458 HERVK_113P63121 156 aa11.67□□□□□ -0.54
VPS72-207ENST00000640458 HIGD2BQ4VC39 106 aa11.67□□□□□ -0.54
VPS72-207ENST00000640458 OR10D4PQ8NGN7 298 aa11.67□□□□□ -0.54
VPS72-207ENST00000640458 IGHV1-58A0A0C4DH39 117 aa11.66□□□□□ -0.54
VPS72-207ENST00000640458 CIRBP-AS1Q8TBR5 109 aa11.66□□□□□ -0.54
VPS72-207ENST00000640458 IGHV3-64A0A075B6Q5 118 aa11.65□□□□□ -0.54
VPS72-207ENST00000640458 TINCRA0A1B0GVN0 87 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms