RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 PSORS1C2Q9UIG4 136 aa11.35□□□□□ -0.59
CLN6-220ENST00000637450 SMIM2Q9BVW6 85 aa11.34□□□□□ -0.59
CLN6-220ENST00000637450 IGHV3OR16-9A0A0B4J2B5 98 aa11.33□□□□□ -0.6
CLN6-220ENST00000637450 MT-ND6P03923 174 aa11.33□□□□□ -0.6
CLN6-220ENST00000637450 SRSF3P84103 164 aaKnown RBP11.33□□□□□ -0.6
CLN6-220ENST00000637450 SPANXA1Q9NS26 97 aa11.33□□□□□ -0.6
CLN6-220ENST00000637450 D6R8Y8 96 aa11.32□□□□□ -0.6
CLN6-220ENST00000637450 F8WDY8 70 aa11.32□□□□□ -0.6
CLN6-220ENST00000637450 MRPS36P82909 103 aaKnown RBP11.32□□□□□ -0.6
CLN6-220ENST00000637450 PHF5AQ7RTV0 110 aaKnown RBP11.32□□□□□ -0.6
CLN6-220ENST00000637450 ORAOV1Q8WV07 137 aa11.32□□□□□ -0.6
CLN6-220ENST00000637450 MRPL35Q9NZE8 188 aaKnown RBP11.32□□□□□ -0.6
CLN6-220ENST00000637450 F8W036 122 aa11.31□□□□□ -0.6
CLN6-220ENST00000637450 HBBP68871 147 aa11.31□□□□□ -0.6
CLN6-220ENST00000637450 PEA15Q15121 130 aa11.31□□□□□ -0.6
CLN6-220ENST00000637450 MRPL54Q6P161 138 aaKnown RBP11.31□□□□□ -0.6
CLN6-220ENST00000637450 A0A1B0GXF2 115 aa11.3□□□□□ -0.6
CLN6-220ENST00000637450 NPYP01303 97 aa11.3□□□□□ -0.6
CLN6-220ENST00000637450 S100A8P05109 93 aa11.3□□□□□ -0.6
CLN6-220ENST00000637450 C1orf137Q5JT78 98 aa11.3□□□□□ -0.6
CLN6-220ENST00000637450 IMMP2LQ96T52 175 aa11.3□□□□□ -0.6
CLN6-220ENST00000637450 SMDT1Q9H4I9 107 aa11.3□□□□□ -0.6
CLN6-220ENST00000637450 C10orf25Q5T742 122 aa11.29□□□□□ -0.6
CLN6-220ENST00000637450 IFITM10A6NMD0 228 aa11.28□□□□□ -0.6
CLN6-220ENST00000637450 NDUFA1O15239 70 aa11.28□□□□□ -0.6
CLN6-220ENST00000637450 PPBPP02775 128 aa11.28□□□□□ -0.6
CLN6-220ENST00000637450 TLX1NBP0CAT3 122 aa11.27□□□□□ -0.61
CLN6-220ENST00000637450 UNQ6190/PRO20217Q6UXQ8 127 aa11.27□□□□□ -0.61
CLN6-220ENST00000637450 C6orf48Q9UBA6 75 aa11.26□□□□□ -0.61
CLN6-220ENST00000637450 A0A1B0GVG6 124 aa11.25□□□□□ -0.61
CLN6-220ENST00000637450 FAM168BA1KXE4 195 aa11.25□□□□□ -0.61
CLN6-220ENST00000637450 TMEM136Q6ZRR5 245 aa11.25□□□□□ -0.61
CLN6-220ENST00000637450 A0A087WZ39 114 aa11.24□□□□□ -0.61
CLN6-220ENST00000637450 TGIF2-C20orf24A0A0A6YYL0 155 aa11.24□□□□□ -0.61
CLN6-220ENST00000637450 IGLV7-43P04211 117 aa11.24□□□□□ -0.61
CLN6-220ENST00000637450 RAB5AP20339 215 aa11.24□□□□□ -0.61
CLN6-220ENST00000637450 KIAA0087Q14695 138 aa11.24□□□□□ -0.61
CLN6-220ENST00000637450 KRTAP11-1Q8IUC1 163 aa11.24□□□□□ -0.61
CLN6-220ENST00000637450 ORMDL3Q8N138 153 aa11.24□□□□□ -0.61
CLN6-220ENST00000637450 PYGO1Q9Y3Y4 419 aa11.24□□□□□ -0.61
CLN6-220ENST00000637450 IFI27P40305 119 aaPredicted RBP11.23□□□□□ -0.61
CLN6-220ENST00000637450 LINC00242Q5T6M2 205 aa11.23□□□□□ -0.61
CLN6-220ENST00000637450 PRELID3AQ96N28 172 aa11.23□□□□□ -0.61
CLN6-220ENST00000637450 IGLV4-3A0A075B6K6 122 aa11.22□□□□□ -0.61
CLN6-220ENST00000637450 GAGE2EQ4V326 116 aa11.22□□□□□ -0.61
CLN6-220ENST00000637450 ATP5L2Q7Z4Y8 100 aa11.22□□□□□ -0.61
CLN6-220ENST00000637450 DIRC1Q969H9 104 aa11.22□□□□□ -0.61
CLN6-220ENST00000637450 GAGE2DQ9UEU5 116 aa11.22□□□□□ -0.61
CLN6-220ENST00000637450 LPAP08519 4548 aa11.21□□□□□ -0.61
CLN6-220ENST00000637450 PRSS47A8MTI9 375 aa11.21□□□□□ -0.61
CLN6-220ENST00000637450 KRTAP7-1Q8IUC3 87 aa11.21□□□□□ -0.61
CLN6-220ENST00000637450 FAM19A5Q7Z5A7 132 aaPredicted RBP11.2□□□□□ -0.62
CLN6-220ENST00000637450 TMEM141Q96I45 108 aa11.2□□□□□ -0.62
CLN6-220ENST00000637450 TRBV30A0A0K0K1B3 111 aa11.19□□□□□ -0.62
CLN6-220ENST00000637450 PRR26Q8N8Z3 221 aa11.19□□□□□ -0.62
CLN6-220ENST00000637450 H0Y9J4 135 aa11.18□□□□□ -0.62
CLN6-220ENST00000637450 C2orf82Q6UX34 121 aa11.18□□□□□ -0.62
CLN6-220ENST00000637450 LAMTOR2Q9Y2Q5 125 aa11.18□□□□□ -0.62
CLN6-220ENST00000637450 LOC389332A0A1B0GUA5 103 aa11.17□□□□□ -0.62
CLN6-220ENST00000637450 UBE2D1P51668 147 aa11.17□□□□□ -0.62
CLN6-220ENST00000637450 TEX43Q6ZNM6 134 aa11.17□□□□□ -0.62
CLN6-220ENST00000637450 LINC01561Q8N1V8 128 aa11.17□□□□□ -0.62
CLN6-220ENST00000637450 NDUFC2-KCTD14E9PQ53 114 aa11.16□□□□□ -0.62
CLN6-220ENST00000637450 M0QXV9 152 aa11.15□□□□□ -0.62
CLN6-220ENST00000637450 C9orf129Q5T035 196 aaKnown RBP11.15□□□□□ -0.62
CLN6-220ENST00000637450 PACRGQ96M98 296 aaPredicted RBP11.15□□□□□ -0.62
CLN6-220ENST00000637450 MAP1LC3AQ9H492 121 aa11.15□□□□□ -0.62
CLN6-220ENST00000637450 UBE2BP63146 152 aa11.14□□□□□ -0.63
CLN6-220ENST00000637450 ZC2HC1BQ5TFG8 222 aa11.14□□□□□ -0.63
CLN6-220ENST00000637450 C2orf66Q6UXQ4 117 aa11.14□□□□□ -0.63
CLN6-220ENST00000637450 Q8N8P6 123 aa11.14□□□□□ -0.63
CLN6-220ENST00000637450 AMELXQ99217 191 aa11.14□□□□□ -0.63
CLN6-220ENST00000637450 C2orf88Q9BSF0 95 aa11.14□□□□□ -0.63
CLN6-220ENST00000637450 CYSLTR1Q9Y271 337 aa11.14□□□□□ -0.63
CLN6-220ENST00000637450 LINC00173Q6ZV60 143 aa11.13□□□□□ -0.63
CLN6-220ENST00000637450 IGLV1-50A0A075B6I6 118 aa11.12□□□□□ -0.63
CLN6-220ENST00000637450 KRTAP1-4P0C5Y4 121 aa11.12□□□□□ -0.63
CLN6-220ENST00000637450 Q6ZN92 141 aa11.12□□□□□ -0.63
CLN6-220ENST00000637450 VCX2Q9H322 139 aa11.12□□□□□ -0.63
CLN6-220ENST00000637450 NPSP0C0P6 89 aa11.11□□□□□ -0.63
CLN6-220ENST00000637450 ORMDL2Q53FV1 153 aa11.11□□□□□ -0.63
CLN6-220ENST00000637450 FAM19A3Q7Z5A8 133 aa11.11□□□□□ -0.63
CLN6-220ENST00000637450 ANAPC16Q96DE5 110 aa11.11□□□□□ -0.63
CLN6-220ENST00000637450 IGIPA6NJ69 53 aa11.1□□□□□ -0.63
CLN6-220ENST00000637450 MT-ND4LP03901 98 aa11.1□□□□□ -0.63
CLN6-220ENST00000637450 PNRC1Q12796 327 aaPredicted RBP11.1□□□□□ -0.63
CLN6-220ENST00000637450 K7EMI3 77 aa11.09□□□□□ -0.63
CLN6-220ENST00000637450 PRSS2P07478 247 aa11.09□□□□□ -0.63
CLN6-220ENST00000637450 C6orf226Q5I0X4 101 aa11.09□□□□□ -0.63
CLN6-220ENST00000637450 CKS1BP61024 79 aa11.08□□□□□ -0.64
CLN6-220ENST00000637450 Q8IZM0 81 aa11.08□□□□□ -0.64
CLN6-220ENST00000637450 TOMM7Q9P0U1 55 aa11.08□□□□□ -0.64
CLN6-220ENST00000637450 LINC00469Q8N7U9 141 aa11.06□□□□□ -0.64
CLN6-220ENST00000637450 ALKBH7Q9BT30 221 aaPredicted RBP11.06□□□□□ -0.64
CLN6-220ENST00000637450 NXT2Q9NPJ8 142 aaKnown RBP11.06□□□□□ -0.64
CLN6-220ENST00000637450 C22orf24Q9Y442 160 aa11.06□□□□□ -0.64
CLN6-220ENST00000637450 ZNF861PO60384 105 aa11.05□□□□□ -0.64
CLN6-220ENST00000637450 HERVK_113P63121 156 aa11.05□□□□□ -0.64
CLN6-220ENST00000637450 CDKN2A-AS1Q9UH64 79 aa11.05□□□□□ -0.64
CLN6-220ENST00000637450 RPL13AP40429 203 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms