RNA–Protein interactions for RNA: ENST00000636969.1

SMARCA2-256, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-256	ENST00000636969	KRTAP2-2	Q9BYT5	123 aa		0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	CTDSP1	Q9GZU7	261 aa		0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	TMEM191A	Q9H0A3	160 aa		0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	VCX2	Q9H322	139 aa		0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	MAP1LC3A	Q9H492	121 aa		0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	SMDT1	Q9H4I9	107 aa		0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	C11orf1	Q9H5F2	150 aa		0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	RPP21	Q9H633	154 aa	Known RBP	0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	NXT2	Q9NPJ8	142 aa	Known RBP	0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	SPANXA1	Q9NS26	97 aa		0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	NHP2	Q9NX24	153 aa	Known RBP	0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	MRPL35	Q9NZE8	188 aa	Known RBP	0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	PLAC8	Q9NZF1	115 aa		0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	TOMM7	Q9P0U1	55 aa		0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	GNG13	Q9P2W3	67 aa		0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	NAT8B	Q9UHF3	227 aa		0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	CYSLTR1	Q9Y271	337 aa		0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	CSDC2	Q9Y534	153 aa	Known RBP	0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	KIF25-AS1	Q9Y6Z4	181 aa		0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969		V9GYH0	126 aa		0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	LYST	Q99698	3801 aa		0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	SVEP1	Q4LDE5	3571 aa		0.49	□□□□□ -2.33
SMARCA2-256	ENST00000636969	TRBV20-1	A0A075B6N2	111 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	TRAV9-1	A0A075B6T8	112 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969		A0A087WYN8	130 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	TRAV13-1	A0A0B4J241	112 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969		A0A0J9YXV3	536 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	TRBV6-5	A0A0K0K1A5	114 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	TRBV27	A0A0K0K1C4	114 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	LOC100131303	A0A0U1RQF7	123 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	LINC00959	A0A1B0GUT2	108 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	ETDC	A0A1B0GVM5	59 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	NDUFAF8	A1L188	74 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	PLAC8L1	A1L4L8	177 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	C5orf52	A6NGY3	159 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	HIGD1C	A8MV81	97 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	TMEM238	C9JI98	176 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969		C9JQL5	133 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	NDUFC2-KCTD14	E9PQ53	114 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969		F8VRH5	84 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969		H0Y9J4	135 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969		H3BQ85	93 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	PANO1	I0J062	215 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969		M0QXV9	152 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	SLC25A20	O43772	301 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	ZNF861P	O60384	105 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	SCO1	O75880	301 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	SCGB1D1	O95968	90 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	TCL1B	O95988	128 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	SPINK1	P00995	79 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	IGLV7-43	P04211	117 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	TLX1NB	P0CAT3	122 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	CHTF8	P0CG12	524 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	CFC1B	P0CG36	223 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	PRB4	P10163	310 aa	Predicted RBP	0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	RNASE3	P12724	160 aa	Known RBP	0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	RAB4A	P20338	218 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	DEFB1	P60022	68 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	KRTAP10-1	P60331	282 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	RPL32	P62910	135 aa	Known RBP	0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	HERV-K104	P63124	156 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	GNG5	P63218	68 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	PRR3	P79522	188 aa	Known RBP	0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	MRPS36	P82909	103 aa	Known RBP	0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	COX6A2	Q02221	97 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	PNRC1	Q12796	327 aa	Predicted RBP	0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	COX17	Q14061	63 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	VAMP3	Q15836	100 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	ADIRF	Q15847	76 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	FAM229B	Q4G0N7	80 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	GAGE2E	Q4V326	116 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	HIGD2B	Q4VC39	106 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	MPV17L2	Q567V2	206 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	PDZD11	Q5EBL8	140 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	CENPW	Q5EE01	88 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	GCSAML	Q5JQS6	135 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	MEIG1	Q5JSS6	88 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	S100A7L2	Q5SY68	101 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	UFSP1	Q6NVU6	142 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	CLPSL2	Q6UWE3	100 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	ENHO	Q6UWT2	76 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	COX6B2	Q6YFQ2	88 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	SDIM1	Q6ZPB5	146 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	TMEM136	Q6ZRR5	245 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969		Q6ZSA8	131 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	LINC00173	Q6ZV60	143 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	FAM231D	Q6ZW35	169 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	FP248	Q71RG6	208 aa	Predicted RBP	0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	COX8C	Q7Z4L0	72 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	ATP5L2	Q7Z4Y8	100 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	FAM19A3	Q7Z5A8	133 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	SLC51B	Q86UW2	128 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	CBLN2	Q8IUK8	224 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	AMN1	Q8IY45	258 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969		Q8IZM0	81 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	LINC00518	Q8N0U6	118 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	C9orf62	Q8N4C0	152 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	LINC00469	Q8N7U9	141 aa		0.48	□□□□□ -2.33
SMARCA2-256	ENST00000636969	LINC00304	Q8N9R0	145 aa		0.48	□□□□□ -2.33

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