RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	RNASE7	Q9H1E1	156 aa	Known RBP	4.69	□□□□□ -1.66
CACNA1A-222	ENST00000636022	RPP21	Q9H633	154 aa	Known RBP	4.69	□□□□□ -1.66
CACNA1A-222	ENST00000636022	TAX1BP3	O14907	124 aa		4.68	□□□□□ -1.66
CACNA1A-222	ENST00000636022	OXT	P01178	125 aa		4.68	□□□□□ -1.66
CACNA1A-222	ENST00000636022	SLPI	P03973	132 aa		4.68	□□□□□ -1.66
CACNA1A-222	ENST00000636022	IGLC3	P0DOY3	106 aa		4.68	□□□□□ -1.66
CACNA1A-222	ENST00000636022	HNRNPA3	P51991	378 aa	Known RBP	4.68	□□□□□ -1.66
CACNA1A-222	ENST00000636022	FOXA3	P55318	350 aa	Predicted RBP	4.68	□□□□□ -1.66
CACNA1A-222	ENST00000636022	TWIST1	Q15672	202 aa		4.68	□□□□□ -1.66
CACNA1A-222	ENST00000636022	GTSF1	Q8WW33	167 aa		4.68	□□□□□ -1.66
CACNA1A-222	ENST00000636022	MRAP2	Q96G30	205 aa		4.68	□□□□□ -1.66
CACNA1A-222	ENST00000636022	SIGMAR1	Q99720	223 aa		4.68	□□□□□ -1.66
CACNA1A-222	ENST00000636022	TRAV26-2	A0A0B4J265	109 aa		4.67	□□□□□ -1.66
CACNA1A-222	ENST00000636022	KRTAP9-6	A0A140TA67	174 aa		4.67	□□□□□ -1.66
CACNA1A-222	ENST00000636022	hDV102S1	A0JD36	115 aa		4.67	□□□□□ -1.66
CACNA1A-222	ENST00000636022	AMT	P48728	403 aa		4.67	□□□□□ -1.66
CACNA1A-222	ENST00000636022	RPL37A	P61513	92 aa	Known RBP	4.67	□□□□□ -1.66
CACNA1A-222	ENST00000636022	BATF	Q16520	125 aa		4.67	□□□□□ -1.66
CACNA1A-222	ENST00000636022		Q6ZVH6	145 aa		4.67	□□□□□ -1.66
CACNA1A-222	ENST00000636022	LRP2	P98164	4655 aa		4.67	□□□□□ -1.66
CACNA1A-222	ENST00000636022	IGHV3-64	A0A075B6Q5	118 aa		4.66	□□□□□ -1.66
CACNA1A-222	ENST00000636022		A0A1B0GW15	77 aa		4.66	□□□□□ -1.66
CACNA1A-222	ENST00000636022	TMEM250	H0YL14	139 aa		4.66	□□□□□ -1.66
CACNA1A-222	ENST00000636022	UBE2L6	O14933	153 aa		4.66	□□□□□ -1.66
CACNA1A-222	ENST00000636022	PNRC1	Q12796	327 aa	Predicted RBP	4.66	□□□□□ -1.66
CACNA1A-222	ENST00000636022	COX19	Q49B96	90 aa		4.66	□□□□□ -1.66
CACNA1A-222	ENST00000636022	FAM231D	Q6ZW35	169 aa		4.66	□□□□□ -1.66
CACNA1A-222	ENST00000636022	C15orf56	Q8N910	161 aa		4.66	□□□□□ -1.66
CACNA1A-222	ENST00000636022	RPL39L	Q96EH5	51 aa	Known RBP	4.66	□□□□□ -1.66
CACNA1A-222	ENST00000636022	GAGE12H	A6NDE8	117 aa		4.65	□□□□□ -1.67
CACNA1A-222	ENST00000636022	NCR2	O95944	276 aa		4.65	□□□□□ -1.67
CACNA1A-222	ENST00000636022	VAMP3	Q15836	100 aa		4.65	□□□□□ -1.67
CACNA1A-222	ENST00000636022	SERTAD4-AS1	Q5TG53	156 aa		4.65	□□□□□ -1.67
CACNA1A-222	ENST00000636022	BOD1L2	Q8IYS8	172 aa		4.65	□□□□□ -1.67
CACNA1A-222	ENST00000636022	SPACA4	Q8TDM5	124 aa		4.65	□□□□□ -1.67
CACNA1A-222	ENST00000636022	VAMP8	Q9BV40	100 aa		4.65	□□□□□ -1.67
CACNA1A-222	ENST00000636022	GEMIN7	Q9H840	131 aa	Known RBP	4.65	□□□□□ -1.67
CACNA1A-222	ENST00000636022	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.64	□□□□□ -1.67
CACNA1A-222	ENST00000636022		A0A087WYN8	130 aa		4.64	□□□□□ -1.67
CACNA1A-222	ENST00000636022	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.64	□□□□□ -1.67
CACNA1A-222	ENST00000636022	TRBV6-5	A0A0K0K1A5	114 aa		4.64	□□□□□ -1.67
CACNA1A-222	ENST00000636022	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.64	□□□□□ -1.67
CACNA1A-222	ENST00000636022	FAM231B	A6NCW3	169 aa		4.64	□□□□□ -1.67
CACNA1A-222	ENST00000636022	SDHAF1	A6NFY7	115 aa		4.64	□□□□□ -1.67
CACNA1A-222	ENST00000636022		A8MWL6	223 aa		4.64	□□□□□ -1.67
CACNA1A-222	ENST00000636022		H7C423	109 aa		4.64	□□□□□ -1.67
CACNA1A-222	ENST00000636022	GAS8-AS1	O95177	125 aa		4.64	□□□□□ -1.67
CACNA1A-222	ENST00000636022	CHTF8	P0CG12	524 aa		4.64	□□□□□ -1.67
CACNA1A-222	ENST00000636022	FGF6	P10767	208 aa		4.64	□□□□□ -1.67
CACNA1A-222	ENST00000636022	C5orf47	Q569G3	176 aa		4.64	□□□□□ -1.67
CACNA1A-222	ENST00000636022	CT83	Q5H943	113 aa		4.64	□□□□□ -1.67
CACNA1A-222	ENST00000636022	RNF185	Q96GF1	192 aa		4.64	□□□□□ -1.67
CACNA1A-222	ENST00000636022	AP5S1	Q9NUS5	200 aa		4.64	□□□□□ -1.67
CACNA1A-222	ENST00000636022	IGKV3OR2-268	A0A0C4DH90	116 aa		4.63	□□□□□ -1.67
CACNA1A-222	ENST00000636022		I3L3M4	83 aa		4.63	□□□□□ -1.67
CACNA1A-222	ENST00000636022	NUPR1	O60356	82 aa		4.63	□□□□□ -1.67
CACNA1A-222	ENST00000636022	TSHB	P01222	138 aa		4.63	□□□□□ -1.67
CACNA1A-222	ENST00000636022	APCS	P02743	223 aa		4.63	□□□□□ -1.67
CACNA1A-222	ENST00000636022	MT1HL1	P0DM35	61 aa		4.63	□□□□□ -1.67
CACNA1A-222	ENST00000636022	RPL32	P62910	135 aa	Known RBP	4.63	□□□□□ -1.67
CACNA1A-222	ENST00000636022	HSD52	Q0P140	79 aa		4.63	□□□□□ -1.67
CACNA1A-222	ENST00000636022	FOXI1	Q12951	378 aa		4.63	□□□□□ -1.67
CACNA1A-222	ENST00000636022	AMMECR1L	Q6DCA0	310 aa		4.63	□□□□□ -1.67
CACNA1A-222	ENST00000636022	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.63	□□□□□ -1.67
CACNA1A-222	ENST00000636022	EIF5A2	Q9GZV4	153 aa	Known RBP	4.63	□□□□□ -1.67
CACNA1A-222	ENST00000636022	PLAC8	Q9NZF1	115 aa		4.63	□□□□□ -1.67
CACNA1A-222	ENST00000636022	PAM16	Q9Y3D7	125 aa		4.63	□□□□□ -1.67
CACNA1A-222	ENST00000636022	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.62	□□□□□ -1.67
CACNA1A-222	ENST00000636022	POLR2K	P53803	58 aa	Known RBP	4.62	□□□□□ -1.67
CACNA1A-222	ENST00000636022	LINC00310	P59036	64 aa		4.62	□□□□□ -1.67
CACNA1A-222	ENST00000636022	COX6A2	Q02221	97 aa		4.62	□□□□□ -1.67
CACNA1A-222	ENST00000636022	HIGD2B	Q4VC39	106 aa		4.62	□□□□□ -1.67
CACNA1A-222	ENST00000636022	RNASEK	Q6P5S7	137 aa	Known RBP	4.62	□□□□□ -1.67
CACNA1A-222	ENST00000636022		Q6ZN92	141 aa		4.62	□□□□□ -1.67
CACNA1A-222	ENST00000636022		Q6ZRU5	148 aa		4.62	□□□□□ -1.67
CACNA1A-222	ENST00000636022	OR5A1	Q8NGJ0	315 aa		4.62	□□□□□ -1.67
CACNA1A-222	ENST00000636022	TSKU	Q8WUA8	353 aa		4.62	□□□□□ -1.67
CACNA1A-222	ENST00000636022	TMEM191A	Q9H0A3	160 aa		4.62	□□□□□ -1.67
CACNA1A-222	ENST00000636022	VCX2	Q9H322	139 aa		4.62	□□□□□ -1.67
CACNA1A-222	ENST00000636022	SS18L2	Q9UHA2	77 aa		4.62	□□□□□ -1.67
CACNA1A-222	ENST00000636022	TRBV27	A0A0K0K1C4	114 aa		4.61	□□□□□ -1.67
CACNA1A-222	ENST00000636022	LINC00959	A0A1B0GUT2	108 aa		4.61	□□□□□ -1.67
CACNA1A-222	ENST00000636022		A0A1B0GUT8	65 aa		4.61	□□□□□ -1.67
CACNA1A-222	ENST00000636022	HIGD1C	A8MV81	97 aa		4.61	□□□□□ -1.67
CACNA1A-222	ENST00000636022		F8WDY8	70 aa		4.61	□□□□□ -1.67
CACNA1A-222	ENST00000636022	PMCH	P20382	165 aa		4.61	□□□□□ -1.67
CACNA1A-222	ENST00000636022	HINT1	P49773	126 aa	Predicted RBP	4.61	□□□□□ -1.67
CACNA1A-222	ENST00000636022	SMAGP	Q0VAQ4	97 aa		4.61	□□□□□ -1.67
CACNA1A-222	ENST00000636022	SPATA45	Q537H7	98 aa		4.61	□□□□□ -1.67
CACNA1A-222	ENST00000636022	PRSS3P2	Q8NHM4	247 aa		4.61	□□□□□ -1.67
CACNA1A-222	ENST00000636022	DPH3	Q96FX2	82 aa		4.61	□□□□□ -1.67
CACNA1A-222	ENST00000636022	SMIM7	Q9BQ49	75 aa		4.61	□□□□□ -1.67
CACNA1A-222	ENST00000636022	ST20	Q9HBF5	79 aa		4.61	□□□□□ -1.67
CACNA1A-222	ENST00000636022	CDC42SE2	Q9NRR3	84 aa		4.61	□□□□□ -1.67
CACNA1A-222	ENST00000636022	ERG28	Q9UKR5	140 aa		4.61	□□□□□ -1.67
CACNA1A-222	ENST00000636022	XCL1	P47992	114 aa		4.6	□□□□□ -1.67
CACNA1A-222	ENST00000636022	BVES-AS1	Q5T3Y7	98 aa		4.6	□□□□□ -1.67
CACNA1A-222	ENST00000636022	LCE3B	Q5TA77	95 aa		4.6	□□□□□ -1.67
CACNA1A-222	ENST00000636022	OSTC	Q9NRP0	149 aa		4.6	□□□□□ -1.67
CACNA1A-222	ENST00000636022		V9GYV3	84 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms