RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 PRSS47A8MTI9 375 aa6.8□□□□□ -1.32
SSBP4-215ENST00000625926 IFI27P40305 119 aaPredicted RBP6.8□□□□□ -1.32
SSBP4-215ENST00000625926 GAGE2BQ13066 116 aa6.8□□□□□ -1.32
SSBP4-215ENST00000625926 LAMTOR2Q9Y2Q5 125 aa6.8□□□□□ -1.32
SSBP4-215ENST00000625926 IGHV3OR16-9A0A0B4J2B5 98 aa6.79□□□□□ -1.32
SSBP4-215ENST00000625926 LOC389332A0A1B0GUA5 103 aa6.79□□□□□ -1.32
SSBP4-215ENST00000625926 IFITM10A6NMD0 228 aa6.79□□□□□ -1.32
SSBP4-215ENST00000625926 PTTG1IPP53801 180 aa6.79□□□□□ -1.32
SSBP4-215ENST00000625926 SPAG11BQ08648 103 aa6.79□□□□□ -1.32
SSBP4-215ENST00000625926 CLLU1Q5K131 121 aa6.79□□□□□ -1.32
SSBP4-215ENST00000625926 OR10D4PQ8NGN7 298 aa6.79□□□□□ -1.32
SSBP4-215ENST00000625926 PYGO1Q9Y3Y4 419 aa6.79□□□□□ -1.32
SSBP4-215ENST00000625926 PRR3P79522 188 aaKnown RBP6.78□□□□□ -1.32
SSBP4-215ENST00000625926 RNF151Q2KHN1 245 aa6.78□□□□□ -1.32
SSBP4-215ENST00000625926 MAP1LC3AQ9H492 121 aa6.78□□□□□ -1.32
SSBP4-215ENST00000625926 F8WDY8 70 aa6.77□□□□□ -1.33
SSBP4-215ENST00000625926 Q8N8P6 123 aa6.77□□□□□ -1.33
SSBP4-215ENST00000625926 ORAOV1Q8WV07 137 aa6.77□□□□□ -1.33
SSBP4-215ENST00000625926 IGLV4-3A0A075B6K6 122 aa6.76□□□□□ -1.33
SSBP4-215ENST00000625926 TGIF2-C20orf24A0A0A6YYL0 155 aa6.76□□□□□ -1.33
SSBP4-215ENST00000625926 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.76□□□□□ -1.33
SSBP4-215ENST00000625926 Q6ZRP5 223 aa6.76□□□□□ -1.33
SSBP4-215ENST00000625926 TMEM141Q96I45 108 aa6.76□□□□□ -1.33
SSBP4-215ENST00000625926 IMMP2LQ96T52 175 aa6.76□□□□□ -1.33
SSBP4-215ENST00000625926 MRPL35Q9NZE8 188 aaKnown RBP6.76□□□□□ -1.33
SSBP4-215ENST00000625926 A0A0J9YXV3 536 aa6.75□□□□□ -1.33
SSBP4-215ENST00000625926 A0A1W2PNN7 141 aa6.75□□□□□ -1.33
SSBP4-215ENST00000625926 NDUFA1O15239 70 aa6.75□□□□□ -1.33
SSBP4-215ENST00000625926 MT1HL1P0DM35 61 aa6.75□□□□□ -1.33
SSBP4-215ENST00000625926 RPL18AQ02543 176 aaKnown RBP6.75□□□□□ -1.33
SSBP4-215ENST00000625926 ORMDL2Q53FV1 153 aa6.75□□□□□ -1.33
SSBP4-215ENST00000625926 LINC00242Q5T6M2 205 aa6.75□□□□□ -1.33
SSBP4-215ENST00000625926 UQCC3Q6UW78 93 aa6.75□□□□□ -1.33
SSBP4-215ENST00000625926 TEX43Q6ZNM6 134 aa6.75□□□□□ -1.33
SSBP4-215ENST00000625926 CTDSP1Q9GZU7 261 aa6.75□□□□□ -1.33
SSBP4-215ENST00000625926 CYSLTR1Q9Y271 337 aa6.75□□□□□ -1.33
SSBP4-215ENST00000625926 A0A087WZ39 114 aa6.74□□□□□ -1.33
SSBP4-215ENST00000625926 TMEM218A2RU14 115 aa6.74□□□□□ -1.33
SSBP4-215ENST00000625926 K7EMI3 77 aa6.74□□□□□ -1.33
SSBP4-215ENST00000625926 C9orf116Q5BN46 136 aaPredicted RBP6.74□□□□□ -1.33
SSBP4-215ENST00000625926 SPINK6Q6UWN8 80 aa6.74□□□□□ -1.33
SSBP4-215ENST00000625926 C2orf66Q6UXQ4 117 aa6.74□□□□□ -1.33
SSBP4-215ENST00000625926 Q6ZN92 141 aa6.74□□□□□ -1.33
SSBP4-215ENST00000625926 C2orf88Q9BSF0 95 aa6.74□□□□□ -1.33
SSBP4-215ENST00000625926 LRP1Q07954 4544 aaKnown RBP6.73□□□□□ -1.33
SSBP4-215ENST00000625926 NPSP0C0P6 89 aa6.73□□□□□ -1.33
SSBP4-215ENST00000625926 VCX2Q9H322 139 aa6.73□□□□□ -1.33
SSBP4-215ENST00000625926 NXT2Q9NPJ8 142 aaKnown RBP6.73□□□□□ -1.33
SSBP4-215ENST00000625926 PLA2G2DQ9UNK4 145 aa6.73□□□□□ -1.33
SSBP4-215ENST00000625926 TLX1NBP0CAT3 122 aa6.72□□□□□ -1.33
SSBP4-215ENST00000625926 ADCYAP1P18509 176 aa6.72□□□□□ -1.33
SSBP4-215ENST00000625926 G0S2P27469 103 aa6.72□□□□□ -1.33
SSBP4-215ENST00000625926 UBE2D1P51668 147 aa6.72□□□□□ -1.33
SSBP4-215ENST00000625926 SRSF9Q13242 221 aaKnown RBP eCLIP6.72□□□□□ -1.33
SSBP4-215ENST00000625926 C10orf25Q5T742 122 aa6.72□□□□□ -1.33
SSBP4-215ENST00000625926 UNQ6190/PRO20217Q6UXQ8 127 aa6.72□□□□□ -1.33
SSBP4-215ENST00000625926 LINC01561Q8N1V8 128 aa6.72□□□□□ -1.33
SSBP4-215ENST00000625926 LINC01600Q96MT4 127 aa6.72□□□□□ -1.33
SSBP4-215ENST00000625926 AMELXQ99217 191 aa6.72□□□□□ -1.33
SSBP4-215ENST00000625926 TRAV9-1A0A075B6T8 112 aa6.71□□□□□ -1.34
SSBP4-215ENST00000625926 IGIPA6NJ69 53 aa6.71□□□□□ -1.34
SSBP4-215ENST00000625926 IFITM2Q01629 132 aa6.71□□□□□ -1.34
SSBP4-215ENST00000625926 KIAA0087Q14695 138 aa6.71□□□□□ -1.34
SSBP4-215ENST00000625926 PAPPA-AS1Q5QFB9 102 aa6.71□□□□□ -1.34
SSBP4-215ENST00000625926 REG3GQ6UW15 175 aa6.71□□□□□ -1.34
SSBP4-215ENST00000625926 C6orf48Q9UBA6 75 aa6.71□□□□□ -1.34
SSBP4-215ENST00000625926 S100PP25815 95 aa6.7□□□□□ -1.34
SSBP4-215ENST00000625926 KIAA1644Q3SXP7 199 aa6.7□□□□□ -1.34
SSBP4-215ENST00000625926 ZC2HC1BQ5TFG8 222 aa6.7□□□□□ -1.34
SSBP4-215ENST00000625926 LINC00173Q6ZV60 143 aa6.7□□□□□ -1.34
SSBP4-215ENST00000625926 SEC11CQ9BY50 192 aa6.7□□□□□ -1.34
SSBP4-215ENST00000625926 FAT3Q8TDW7 4589 aa6.69□□□□□ -1.34
SSBP4-215ENST00000625926 TRBV30A0A0K0K1B3 111 aa6.69□□□□□ -1.34
SSBP4-215ENST00000625926 MT-ND6P03923 174 aa6.69□□□□□ -1.34
SSBP4-215ENST00000625926 SEC11AP67812 179 aa6.69□□□□□ -1.34
SSBP4-215ENST00000625926 GAGE2EQ4V326 116 aa6.69□□□□□ -1.34
SSBP4-215ENST00000625926 PHF5AQ7RTV0 110 aaKnown RBP6.69□□□□□ -1.34
SSBP4-215ENST00000625926 FAM19A3Q7Z5A8 133 aa6.69□□□□□ -1.34
SSBP4-215ENST00000625926 PACRGQ96M98 296 aaPredicted RBP6.69□□□□□ -1.34
SSBP4-215ENST00000625926 GAGE2DQ9UEU5 116 aa6.69□□□□□ -1.34
SSBP4-215ENST00000625926 PSORS1C2Q9UIG4 136 aa6.69□□□□□ -1.34
SSBP4-215ENST00000625926 PRSS2P07478 247 aa6.68□□□□□ -1.34
SSBP4-215ENST00000625926 C2orf82Q6UX34 121 aa6.68□□□□□ -1.34
SSBP4-215ENST00000625926 TOMM6Q96B49 74 aa6.68□□□□□ -1.34
SSBP4-215ENST00000625926 TIMM17AQ99595 171 aa6.68□□□□□ -1.34
SSBP4-215ENST00000625926 GNB1LQ9BYB4 327 aa6.68□□□□□ -1.34
SSBP4-215ENST00000625926 FAM168BA1KXE4 195 aa6.67□□□□□ -1.34
SSBP4-215ENST00000625926 CKS1BP61024 79 aa6.67□□□□□ -1.34
SSBP4-215ENST00000625926 HERVK_113P63121 156 aa6.67□□□□□ -1.34
SSBP4-215ENST00000625926 COX19Q49B96 90 aa6.67□□□□□ -1.34
SSBP4-215ENST00000625926 C6orf226Q5I0X4 101 aa6.67□□□□□ -1.34
SSBP4-215ENST00000625926 C1orf137Q5JT78 98 aa6.67□□□□□ -1.34
SSBP4-215ENST00000625926 COMMD7Q86VX2 200 aa6.67□□□□□ -1.34
SSBP4-215ENST00000625926 SCGB3A1Q96QR1 104 aa6.67□□□□□ -1.34
SSBP4-215ENST00000625926 NDUFC2-KCTD14E9PQ53 114 aa6.66□□□□□ -1.34
SSBP4-215ENST00000625926 ERASQ7Z444 233 aa6.66□□□□□ -1.34
SSBP4-215ENST00000625926 FAM19A5Q7Z5A7 132 aaPredicted RBP6.66□□□□□ -1.34
SSBP4-215ENST00000625926 ALKBH7Q9BT30 221 aaPredicted RBP6.66□□□□□ -1.34
SSBP4-215ENST00000625926 GEMIN7Q9H840 131 aaKnown RBP6.66□□□□□ -1.34
SSBP4-215ENST00000625926 TOMM7Q9P0U1 55 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms